{"id":"https://openalex.org/W4205438206","doi":"https://doi.org/10.1186/s12859-021-04250-0","title":"Predicting Ca2+ and Mg2+ ligand binding sites by deep neural network algorithm","display_name":"Predicting Ca2+ and Mg2+ ligand binding sites by deep neural network algorithm","publication_year":2021,"publication_date":"2021-12-01","ids":{"openalex":"https://openalex.org/W4205438206","doi":"https://doi.org/10.1186/s12859-021-04250-0","pmid":"https://pubmed.ncbi.nlm.nih.gov/35045825"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-021-04250-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04250-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04250-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04250-0","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5066580707","display_name":"Kai Sun","orcid":"https://orcid.org/0000-0002-9482-470X"},"institutions":[{"id":"https://openalex.org/I55654194","display_name":"Inner Mongolia University of Technology","ror":"https://ror.org/05564e019","country_code":"CN","type":"education","lineage":["https://openalex.org/I55654194"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Kai Sun","raw_affiliation_strings":["College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China"],"affiliations":[{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","institution_ids":["https://openalex.org/I55654194"]},{"raw_affiliation_string":"Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","institution_ids":[]},{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China","institution_ids":["https://openalex.org/I55654194"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101670614","display_name":"Xiuzhen Hu","orcid":"https://orcid.org/0000-0003-3601-4554"},"institutions":[{"id":"https://openalex.org/I55654194","display_name":"Inner Mongolia University of Technology","ror":"https://ror.org/05564e019","country_code":"CN","type":"education","lineage":["https://openalex.org/I55654194"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiuzhen Hu","raw_affiliation_strings":["College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China. hxz@imut.edu.cn","Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China. hxz@imut.edu.cn","College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China"],"affiliations":[{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China. hxz@imut.edu.cn","institution_ids":[]},{"raw_affiliation_string":"Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China. hxz@imut.edu.cn","institution_ids":[]},{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China","institution_ids":["https://openalex.org/I55654194"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101985314","display_name":"Zhenxing Feng","orcid":"https://orcid.org/0000-0003-3738-563X"},"institutions":[{"id":"https://openalex.org/I55654194","display_name":"Inner Mongolia University of Technology","ror":"https://ror.org/05564e019","country_code":"CN","type":"education","lineage":["https://openalex.org/I55654194"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhenxing Feng","raw_affiliation_strings":["College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China"],"affiliations":[{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","institution_ids":["https://openalex.org/I55654194"]},{"raw_affiliation_string":"Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","institution_ids":[]},{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China","institution_ids":["https://openalex.org/I55654194"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100332088","display_name":"Hongbin Wang","orcid":null},"institutions":[{"id":"https://openalex.org/I55654194","display_name":"Inner Mongolia University of Technology","ror":"https://ror.org/05564e019","country_code":"CN","type":"education","lineage":["https://openalex.org/I55654194"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongbin Wang","raw_affiliation_strings":["College of Data Science and Application, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","College of Data Science and Application, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China"],"affiliations":[{"raw_affiliation_string":"College of Data Science and Application, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","institution_ids":[]},{"raw_affiliation_string":"College of Data Science and Application, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China","institution_ids":["https://openalex.org/I55654194"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018304181","display_name":"Haotian Lv","orcid":null},"institutions":[{"id":"https://openalex.org/I55654194","display_name":"Inner Mongolia University of Technology","ror":"https://ror.org/05564e019","country_code":"CN","type":"education","lineage":["https://openalex.org/I55654194"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Haotian Lv","raw_affiliation_strings":["College of Data Science and Application, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","College of Data Science and Application, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China"],"affiliations":[{"raw_affiliation_string":"College of Data Science and Application, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","institution_ids":[]},{"raw_affiliation_string":"College of Data Science and Application, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China","institution_ids":["https://openalex.org/I55654194"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100348377","display_name":"Ziyang Wang","orcid":"https://orcid.org/0000-0001-9481-7625"},"institutions":[{"id":"https://openalex.org/I55654194","display_name":"Inner Mongolia University of Technology","ror":"https://ror.org/05564e019","country_code":"CN","type":"education","lineage":["https://openalex.org/I55654194"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ziyang Wang","raw_affiliation_strings":["College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People\u2019s Republic of China"],"affiliations":[{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","institution_ids":["https://openalex.org/I55654194"]},{"raw_affiliation_string":"Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","institution_ids":[]},{"raw_affiliation_string":"Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People\u2019s Republic of China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078365733","display_name":"Gaimei Zhang","orcid":"https://orcid.org/0000-0002-6505-8022"},"institutions":[{"id":"https://openalex.org/I4210148590","display_name":"Hohhot First Hospital","ror":"https://ror.org/04pbh9679","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210148590"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Gaimei Zhang","raw_affiliation_strings":["Hohhot First Hospital, Hohhot, 010051, People's Republic of China","Hohhot First Hospital, Hohhot, 010051, People\u2019s Republic of China"],"affiliations":[{"raw_affiliation_string":"Hohhot First Hospital, Hohhot, 010051, People's Republic of China","institution_ids":[]},{"raw_affiliation_string":"Hohhot First Hospital, Hohhot, 010051, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4210148590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004363895","display_name":"Shuang Xu","orcid":"https://orcid.org/0000-0003-3576-6914"},"institutions":[{"id":"https://openalex.org/I55654194","display_name":"Inner Mongolia University of Technology","ror":"https://ror.org/05564e019","country_code":"CN","type":"education","lineage":["https://openalex.org/I55654194"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shuang Xu","raw_affiliation_strings":["College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China"],"affiliations":[{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","institution_ids":["https://openalex.org/I55654194"]},{"raw_affiliation_string":"Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","institution_ids":[]},{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People\u2019s Republic of China","institution_ids":["https://openalex.org/I55654194"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030871468","display_name":"Xiaoxiao You","orcid":null},"institutions":[{"id":"https://openalex.org/I55654194","display_name":"Inner Mongolia University of Technology","ror":"https://ror.org/05564e019","country_code":"CN","type":"education","lineage":["https://openalex.org/I55654194"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaoxiao You","raw_affiliation_strings":["College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People\u2019s Republic of China"],"affiliations":[{"raw_affiliation_string":"College of Sciences, Inner Mongolia University of Technology, Hohhot, 010051, People's Republic of China","institution_ids":["https://openalex.org/I55654194"]},{"raw_affiliation_string":"Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People's Republic of China","institution_ids":[]},{"raw_affiliation_string":"Inner Mongolia Key Laboratory of Statistical Analysis Theory for Life Data and Neural Network Modeling, Hohhot, People\u2019s Republic of China","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5066580707"],"corresponding_institution_ids":["https://openalex.org/I55654194"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.1623,"has_fulltext":true,"cited_by_count":5,"citation_normalized_percentile":{"value":0.50690891,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"22","issue":"S12","first_page":"324","last_page":"324"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/undersampling","display_name":"Undersampling","score":0.8236501216888428},{"id":"https://openalex.org/keywords/artificial-neural-network","display_name":"Artificial neural network","score":0.7223418951034546},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.582037091255188},{"id":"https://openalex.org/keywords/ligand","display_name":"Ligand (biochemistry)","score":0.5437120795249939},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5323054790496826},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.48404330015182495},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4674077332019806},{"id":"https://openalex.org/keywords/binding-site","display_name":"Binding site","score":0.41541382670402527},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.37652885913848877},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3494963049888611},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34072810411453247},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.16049998998641968}],"concepts":[{"id":"https://openalex.org/C136536468","wikidata":"https://www.wikidata.org/wiki/Q1225894","display_name":"Undersampling","level":2,"score":0.8236501216888428},{"id":"https://openalex.org/C50644808","wikidata":"https://www.wikidata.org/wiki/Q192776","display_name":"Artificial neural network","level":2,"score":0.7223418951034546},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.582037091255188},{"id":"https://openalex.org/C116569031","wikidata":"https://www.wikidata.org/wiki/Q899107","display_name":"Ligand (biochemistry)","level":3,"score":0.5437120795249939},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5323054790496826},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.48404330015182495},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4674077332019806},{"id":"https://openalex.org/C107824862","wikidata":"https://www.wikidata.org/wiki/Q616005","display_name":"Binding site","level":2,"score":0.41541382670402527},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.37652885913848877},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3494963049888611},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34072810411453247},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.16049998998641968},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016571","descriptor_name":"Neural Networks, Computer","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-021-04250-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04250-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04250-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:35045825","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/35045825","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:14a0847be11d4218924e8c716ae17205","is_oa":true,"landing_page_url":"https://doaj.org/article/14a0847be11d4218924e8c716ae17205","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 22, Iss S12, Pp 1-12 (2022)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8772041","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8772041","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-021-04250-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04250-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04250-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1231421488","display_name":null,"funder_award_id":"under","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2087396116","display_name":null,"funder_award_id":"China","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G391238517","display_name":null,"funder_award_id":", and","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4792578945","display_name":null,"funder_award_id":"61961032","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G854504456","display_name":null,"funder_award_id":"2019BS03025","funder_id":"https://openalex.org/F4320322868","funder_display_name":"Natural Science Foundation of Inner Mongolia"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320322868","display_name":"Natural Science Foundation of Inner Mongolia","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W4205438206.pdf","grobid_xml":"https://content.openalex.org/works/W4205438206.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W1535190594","https://openalex.org/W1963886906","https://openalex.org/W1971784866","https://openalex.org/W2005120335","https://openalex.org/W2029469631","https://openalex.org/W2085224242","https://openalex.org/W2089939121","https://openalex.org/W2092146175","https://openalex.org/W2094036688","https://openalex.org/W2107024517","https://openalex.org/W2166507618","https://openalex.org/W2170171070","https://openalex.org/W2202100052","https://openalex.org/W2401791034","https://openalex.org/W2564684361","https://openalex.org/W2565035093","https://openalex.org/W2731161895","https://openalex.org/W2751942010","https://openalex.org/W2789244308","https://openalex.org/W2801504028","https://openalex.org/W2912204568","https://openalex.org/W2918335507","https://openalex.org/W2919115771","https://openalex.org/W2981769495","https://openalex.org/W2995420950","https://openalex.org/W3035083542","https://openalex.org/W3049410214","https://openalex.org/W3147354928","https://openalex.org/W4239927971","https://openalex.org/W4248449579","https://openalex.org/W6643326796","https://openalex.org/W6652944025"],"related_works":["https://openalex.org/W2109073422","https://openalex.org/W2887783772","https://openalex.org/W2101754595","https://openalex.org/W2534887053","https://openalex.org/W2026172757","https://openalex.org/W4249381695","https://openalex.org/W4389292014","https://openalex.org/W2394059563","https://openalex.org/W2017942469","https://openalex.org/W2025584407"],"abstract_inverted_index":{"An":[0],"efficient":[1],"method":[2],"for":[3],"predicting":[4],"Mg<sup>2+</sup>":[5],"and":[6],"Ca<sup>2+</sup>":[7],"ligand":[8],"binding":[9],"sites":[10],"was":[11],"presented.":[12]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
