{"id":"https://openalex.org/W3165233449","doi":"https://doi.org/10.1186/s12859-021-04197-2","title":"Hypergraph models of biological networks to identify genes critical to pathogenic viral response","display_name":"Hypergraph models of biological networks to identify genes critical to pathogenic viral response","publication_year":2021,"publication_date":"2021-05-29","ids":{"openalex":"https://openalex.org/W3165233449","doi":"https://doi.org/10.1186/s12859-021-04197-2","mag":"3165233449","pmid":"https://pubmed.ncbi.nlm.nih.gov/34051754"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-021-04197-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04197-2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04197-2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04197-2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5090587420","display_name":"Song Feng","orcid":"https://orcid.org/0000-0003-3983-9009"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Song Feng","raw_affiliation_strings":["Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA"],"affiliations":[{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102885100","display_name":"Emily Heath","orcid":"https://orcid.org/0000-0001-6034-4241"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emily Heath","raw_affiliation_strings":["Department of Mathematics, University of Illinois, Urbana-Champaign, IL, USA"],"affiliations":[{"raw_affiliation_string":"Department of Mathematics, University of Illinois, Urbana-Champaign, IL, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032787473","display_name":"Brett Jefferson","orcid":"https://orcid.org/0000-0001-5313-7375"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brett Jefferson","raw_affiliation_strings":["Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA"],"affiliations":[{"raw_affiliation_string":"Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059387152","display_name":"Cliff Joslyn","orcid":"https://orcid.org/0000-0002-5923-5547"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I126345244","display_name":"Portland State University","ror":"https://ror.org/00yn2fy02","country_code":"US","type":"education","lineage":["https://openalex.org/I126345244"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Cliff Joslyn","raw_affiliation_strings":["Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA","Systems Science Program, Portland State University, Portland, OR, USA"],"affiliations":[{"raw_affiliation_string":"Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA","institution_ids":["https://openalex.org/I142606810"]},{"raw_affiliation_string":"Systems Science Program, Portland State University, Portland, OR, USA","institution_ids":["https://openalex.org/I126345244"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066361433","display_name":"Henry Kvinge","orcid":"https://orcid.org/0000-0003-4108-1364"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Henry Kvinge","raw_affiliation_strings":["Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA"],"affiliations":[{"raw_affiliation_string":"Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061514063","display_name":"Hugh Mitchell","orcid":"https://orcid.org/0000-0003-0143-8461"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hugh D. Mitchell","raw_affiliation_strings":["Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA"],"affiliations":[{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047290243","display_name":"Brenda Praggastis","orcid":"https://orcid.org/0000-0003-1344-0497"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brenda Praggastis","raw_affiliation_strings":["Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA"],"affiliations":[{"raw_affiliation_string":"Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033752290","display_name":"Amie J. Eisfeld","orcid":"https://orcid.org/0000-0003-2231-3107"},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amie J. Eisfeld","raw_affiliation_strings":["Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064602090","display_name":"Amy Sims","orcid":null},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amy C. Sims","raw_affiliation_strings":["Signature Science and Technology Division, Pacific Northwest National Laboratory, Richland, WA, USA"],"affiliations":[{"raw_affiliation_string":"Signature Science and Technology Division, Pacific Northwest National Laboratory, Richland, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036492154","display_name":"Larissa B. Thackray","orcid":"https://orcid.org/0000-0002-9380-6569"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Larissa B. Thackray","raw_affiliation_strings":["Department of Medicine, Washington University School of Medicine, 63110, Saint Louis, MO, USA"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, Washington University School of Medicine, 63110, Saint Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077731040","display_name":"Shufang Fan","orcid":"https://orcid.org/0000-0002-1606-6229"},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shufang Fan","raw_affiliation_strings":["Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030602853","display_name":"Kevin Walters","orcid":"https://orcid.org/0000-0002-1541-4447"},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin B. Walters","raw_affiliation_strings":["Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071340041","display_name":"Peter Halfmann","orcid":"https://orcid.org/0000-0002-1648-1625"},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter J. Halfmann","raw_affiliation_strings":["Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020475683","display_name":"Danielle Westhoff-Smith","orcid":null},"institutions":[{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Danielle Westhoff-Smith","raw_affiliation_strings":["Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA","institution_ids":["https://openalex.org/I135310074"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019532045","display_name":"Qing Tan","orcid":"https://orcid.org/0000-0001-9926-3166"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qing Tan","raw_affiliation_strings":["Department of Medicine, Washington University School of Medicine, 63110, Saint Louis, MO, USA"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, Washington University School of Medicine, 63110, Saint Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059897573","display_name":"Vineet D. Menachery","orcid":"https://orcid.org/0000-0001-8803-7606"},"institutions":[{"id":"https://openalex.org/I55302922","display_name":"The University of Texas Medical Branch at Galveston","ror":"https://ror.org/016tfm930","country_code":"US","type":"education","lineage":["https://openalex.org/I55302922"]},{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vineet D. Menachery","raw_affiliation_strings":["Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA","Department of Microbiology and Immunology, University of Texas Medical Branch, Galveston, TX, USA"],"affiliations":[{"raw_affiliation_string":"Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]},{"raw_affiliation_string":"Department of Microbiology and Immunology, University of Texas Medical Branch, Galveston, TX, USA","institution_ids":["https://openalex.org/I55302922"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001891655","display_name":"Timothy P. Sheahan","orcid":"https://orcid.org/0000-0001-9181-2183"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Timothy P. Sheahan","raw_affiliation_strings":["Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015975020","display_name":"Adam S. Cockrell","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Adam S. Cockrell","raw_affiliation_strings":["KNOWBIO LLC., Durham, NC, 27703, USA"],"affiliations":[{"raw_affiliation_string":"KNOWBIO LLC., Durham, NC, 27703, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062626610","display_name":"Jacob Kocher","orcid":"https://orcid.org/0000-0001-6768-3449"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jacob F. Kocher","raw_affiliation_strings":["Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008025648","display_name":"Kelly G. Stratton","orcid":"https://orcid.org/0000-0002-1721-9688"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kelly G. Stratton","raw_affiliation_strings":["Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA"],"affiliations":[{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112382133","display_name":"Natalie C. Heller","orcid":null},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Natalie C. Heller","raw_affiliation_strings":["Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA"],"affiliations":[{"raw_affiliation_string":"Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069253580","display_name":"Lisa Bramer","orcid":"https://orcid.org/0000-0002-8384-1926"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lisa M. Bramer","raw_affiliation_strings":["Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA"],"affiliations":[{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070153307","display_name":"Michael Diamond","orcid":"https://orcid.org/0000-0002-8791-3165"},"institutions":[{"id":"https://openalex.org/I204465549","display_name":"Washington University in St. Louis","ror":"https://ror.org/01yc7t268","country_code":"US","type":"education","lineage":["https://openalex.org/I204465549"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael S. Diamond","raw_affiliation_strings":["Department of Medicine, Washington University School of Medicine, 63110, Saint Louis, MO, USA","Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO, USA","Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, Washington University School of Medicine, 63110, Saint Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Department of Molecular Microbiology, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]},{"raw_affiliation_string":"Department of Pathology and Immunology, Washington University School of Medicine, St. Louis, MO, USA","institution_ids":["https://openalex.org/I204465549"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017501496","display_name":"Ralph S. Baric","orcid":"https://orcid.org/0000-0001-6827-8701"},"institutions":[{"id":"https://openalex.org/I114027177","display_name":"University of North Carolina at Chapel Hill","ror":"https://ror.org/0130frc33","country_code":"US","type":"education","lineage":["https://openalex.org/I114027177"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ralph S. Baric","raw_affiliation_strings":["Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA"],"affiliations":[{"raw_affiliation_string":"Department of Epidemiology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA","institution_ids":["https://openalex.org/I114027177"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053476989","display_name":"Katrina M. Waters","orcid":"https://orcid.org/0000-0003-4696-5396"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Katrina M. Waters","raw_affiliation_strings":["Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","Department of Comparative Medicine, University of Washington, Seattle, WA, USA"],"affiliations":[{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","institution_ids":["https://openalex.org/I142606810"]},{"raw_affiliation_string":"Department of Comparative Medicine, University of Washington, Seattle, WA, USA","institution_ids":["https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076363097","display_name":"Yoshihiro Kawaoka","orcid":"https://orcid.org/0000-0001-5061-8296"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]},{"id":"https://openalex.org/I135310074","display_name":"University of Wisconsin\u2013Madison","ror":"https://ror.org/01y2jtd41","country_code":"US","type":"education","lineage":["https://openalex.org/I135310074"]},{"id":"https://openalex.org/I161296585","display_name":"Tokyo University of Science","ror":"https://ror.org/05sj3n476","country_code":"JP","type":"education","lineage":["https://openalex.org/I161296585"]},{"id":"https://openalex.org/I4210158720","display_name":"Social Insurance Saitama Chuo Hospital","ror":"https://ror.org/04vqzd428","country_code":"JP","type":"healthcare","lineage":["https://openalex.org/I4210132540","https://openalex.org/I4210158720"]},{"id":"https://openalex.org/I4210086300","display_name":"National Institute of Infectious Diseases","ror":"https://ror.org/001ggbx22","country_code":"JP","type":"government","lineage":["https://openalex.org/I1333985979","https://openalex.org/I4210086300"]}],"countries":["JP","US"],"is_corresponding":false,"raw_author_name":"Yoshihiro Kawaoka","raw_affiliation_strings":["Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA","Department of Special Pathogens, International Research Center for Infectious Diseases, Institute of Medical Science, University of Tokyo, Tokyo, 108-8639, Japan","Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, 108-8639, Japan","ERATO Infection-Induced Host Responses Project, Saitama, 332-0012, Japan"],"affiliations":[{"raw_affiliation_string":"Department of Pathobiological Sciences, School of Veterinary Medicine, Influenza Research Institute, University of Wisconsin-Madison, 575 Science Drive, 53711, Madison, WI, USA","institution_ids":["https://openalex.org/I135310074"]},{"raw_affiliation_string":"Department of Special Pathogens, International Research Center for Infectious Diseases, Institute of Medical Science, University of Tokyo, Tokyo, 108-8639, Japan","institution_ids":["https://openalex.org/I4210086300","https://openalex.org/I161296585"]},{"raw_affiliation_string":"Division of Virology, Department of Microbiology and Immunology, Institute of Medical Science, University of Tokyo, Tokyo, 108-8639, Japan","institution_ids":["https://openalex.org/I74801974","https://openalex.org/I161296585"]},{"raw_affiliation_string":"ERATO Infection-Induced Host Responses Project, Saitama, 332-0012, Japan","institution_ids":["https://openalex.org/I4210158720"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020608405","display_name":"Jason McDermott","orcid":"https://orcid.org/0000-0003-2961-2572"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I165690674","display_name":"Oregon Health & Science University","ror":"https://ror.org/009avj582","country_code":"US","type":"education","lineage":["https://openalex.org/I165690674"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jason E. McDermott","raw_affiliation_strings":["Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","Department of Molecular Microbiology and Immunology, Oregon Health and Science University, Portland, OR, USA"],"affiliations":[{"raw_affiliation_string":"Biological Sciences Division, Pacific Northwest National Laboratory, Richland, WA, USA","institution_ids":["https://openalex.org/I142606810"]},{"raw_affiliation_string":"Department of Molecular Microbiology and Immunology, Oregon Health and Science University, Portland, OR, USA","institution_ids":["https://openalex.org/I165690674"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022505886","display_name":"Emilie Purvine","orcid":"https://orcid.org/0000-0003-2069-5594"},"institutions":[{"id":"https://openalex.org/I142606810","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307","country_code":"US","type":"facility","lineage":["https://openalex.org/I1325736334","https://openalex.org/I1330989302","https://openalex.org/I142606810","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Emilie Purvine","raw_affiliation_strings":["Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA. emilie.purvine@pnnl.gov","Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA"],"affiliations":[{"raw_affiliation_string":"Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA. emilie.purvine@pnnl.gov","institution_ids":[]},{"raw_affiliation_string":"Computing and Analytics Division, Pacific Northwest National Laboratory, Seattle, WA, USA","institution_ids":["https://openalex.org/I142606810"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":28,"corresponding_author_ids":["https://openalex.org/A5090587420"],"corresponding_institution_ids":["https://openalex.org/I142606810"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":6.8168,"has_fulltext":true,"cited_by_count":100,"citation_normalized_percentile":{"value":0.98042438,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"22","issue":"1","first_page":"287","last_page":"287"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.9905999898910522,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/hypergraph","display_name":"Hypergraph","score":0.8737936019897461},{"id":"https://openalex.org/keywords/betweenness-centrality","display_name":"Betweenness centrality","score":0.7858035564422607},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.7271667718887329},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6314629316329956},{"id":"https://openalex.org/keywords/centrality","display_name":"Centrality","score":0.6229318380355835},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5515244007110596},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5218161940574646},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.478233277797699},{"id":"https://openalex.org/keywords/biological-data","display_name":"Biological data","score":0.47470465302467346},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.42701050639152527},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.42281392216682434},{"id":"https://openalex.org/keywords/graph","display_name":"Graph","score":0.41327548027038574},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3830299377441406},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3470498323440552},{"id":"https://openalex.org/keywords/theoretical-computer-science","display_name":"Theoretical computer science","score":0.3429335653781891},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.17537719011306763},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.15631142258644104},{"id":"https://openalex.org/keywords/combinatorics","display_name":"Combinatorics","score":0.1508176028728485}],"concepts":[{"id":"https://openalex.org/C2781221856","wikidata":"https://www.wikidata.org/wiki/Q840247","display_name":"Hypergraph","level":2,"score":0.8737936019897461},{"id":"https://openalex.org/C117045392","wikidata":"https://www.wikidata.org/wiki/Q4899215","display_name":"Betweenness centrality","level":3,"score":0.7858035564422607},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.7271667718887329},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6314629316329956},{"id":"https://openalex.org/C53811970","wikidata":"https://www.wikidata.org/wiki/Q5062194","display_name":"Centrality","level":2,"score":0.6229318380355835},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5515244007110596},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5218161940574646},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.478233277797699},{"id":"https://openalex.org/C201797286","wikidata":"https://www.wikidata.org/wiki/Q4914986","display_name":"Biological data","level":2,"score":0.47470465302467346},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.42701050639152527},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.42281392216682434},{"id":"https://openalex.org/C132525143","wikidata":"https://www.wikidata.org/wiki/Q141488","display_name":"Graph","level":2,"score":0.41327548027038574},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3830299377441406},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3470498323440552},{"id":"https://openalex.org/C80444323","wikidata":"https://www.wikidata.org/wiki/Q2878974","display_name":"Theoretical computer science","level":1,"score":0.3429335653781891},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.17537719011306763},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.15631142258644104},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.1508176028728485},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008954","descriptor_name":"Models, Biological","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1186/s12859-021-04197-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04197-2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04197-2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34051754","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34051754","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:digitalcommons.wustl.edu:oa_4-1239","is_oa":true,"landing_page_url":"https://digitalcommons.wustl.edu/oa_4/228","pdf_url":null,"source":{"id":"https://openalex.org/S4306400764","display_name":"Digital Commons@Becker (Washington University School of Medicine)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I204465549","host_organization_name":"Washington University in St. Louis","host_organization_lineage":["https://openalex.org/I204465549"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"2020-Current year OA Pubs","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:3730664a2b894f34b1b4e404f44398c0","is_oa":true,"landing_page_url":"https://doaj.org/article/3730664a2b894f34b1b4e404f44398c0","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 22, Iss 1, Pp 1-21 (2021)","raw_type":"article"},{"id":"pmh:oai:osti.gov:1805294","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1805294","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:8164482","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8164482","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-021-04197-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04197-2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-021-04197-2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2429659254","display_name":null,"funder_award_id":"73639","funder_id":"https://openalex.org/F4320338354","funder_display_name":"Pacific Northwest National Laboratory"},{"id":"https://openalex.org/G5391555051","display_name":null,"funder_award_id":"U19AI106772","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G6611350873","display_name":null,"funder_award_id":"HHSN272200800060C","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G7577140921","display_name":null,"funder_award_id":"AI106772","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320306250","display_name":"Battelle","ror":"https://ror.org/01h5tnr73"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"},{"id":"https://openalex.org/F4320338354","display_name":"Pacific Northwest National Laboratory","ror":"https://ror.org/05h992307"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3165233449.pdf","grobid_xml":"https://content.openalex.org/works/W3165233449.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1533329293","https://openalex.org/W1556771345","https://openalex.org/W1973530869","https://openalex.org/W1980860316","https://openalex.org/W2031502377","https://openalex.org/W2044525257","https://openalex.org/W2046984465","https://openalex.org/W2050017155","https://openalex.org/W2068859304","https://openalex.org/W2071928194","https://openalex.org/W2083786039","https://openalex.org/W2103208261","https://openalex.org/W2105129830","https://openalex.org/W2112204146","https://openalex.org/W2130410032","https://openalex.org/W2131858707","https://openalex.org/W2132022337","https://openalex.org/W2143693270","https://openalex.org/W2146469651","https://openalex.org/W2150318080","https://openalex.org/W2168609983","https://openalex.org/W2522653422","https://openalex.org/W2748936567","https://openalex.org/W2765206455","https://openalex.org/W2767544505","https://openalex.org/W2888600604","https://openalex.org/W2892220278","https://openalex.org/W2896253905","https://openalex.org/W2915857125","https://openalex.org/W2951375448","https://openalex.org/W2971992123","https://openalex.org/W2973762307","https://openalex.org/W2978408091","https://openalex.org/W3004052817","https://openalex.org/W3013931706","https://openalex.org/W3035086707","https://openalex.org/W3040946540","https://openalex.org/W3103423414","https://openalex.org/W3105627253"],"related_works":["https://openalex.org/W2155492529","https://openalex.org/W4252504573","https://openalex.org/W2158714033","https://openalex.org/W4385510321","https://openalex.org/W15348386","https://openalex.org/W2314128295","https://openalex.org/W4287026692","https://openalex.org/W3213185671","https://openalex.org/W4210989272","https://openalex.org/W78967844"],"abstract_inverted_index":{"Our":[0],"results":[1],"demonstrate":[2],"the":[3],"utility":[4],"of":[5,23],"using":[6],"hypergraphs":[7],"to":[8,20],"represent":[9],"complex":[10],"biological":[11],"systems":[12],"and":[13],"highlight":[14],"central":[15],"important":[16],"responses":[17],"in":[18],"common":[19],"a":[21],"variety":[22],"highly":[24],"pathogenic":[25],"viruses.":[26]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":34},{"year":2024,"cited_by_count":25},{"year":2023,"cited_by_count":20},{"year":2022,"cited_by_count":15},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}