{"id":"https://openalex.org/W3164749183","doi":"https://doi.org/10.1186/s12859-021-04033-7","title":"Boosting scRNA-seq data clustering by cluster-aware feature weighting","display_name":"Boosting scRNA-seq data clustering by cluster-aware feature weighting","publication_year":2021,"publication_date":"2021-06-02","ids":{"openalex":"https://openalex.org/W3164749183","doi":"https://doi.org/10.1186/s12859-021-04033-7","mag":"3164749183","pmid":"https://pubmed.ncbi.nlm.nih.gov/34078287"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-021-04033-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04033-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04033-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04033-7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5068852522","display_name":"Ruiyi Li","orcid":"https://orcid.org/0000-0002-6414-4834"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Rui-Yi Li","raw_affiliation_strings":["Department of Computer Science and Technology, Tongji University, 4800 Caoan Road, Shanghai, 201804, China","Department of Computer Science and Technology, Tongji University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Tongji University, 4800 Caoan Road, Shanghai, 201804, China","institution_ids":["https://openalex.org/I116953780"]},{"raw_affiliation_string":"Department of Computer Science and Technology, Tongji University, Shanghai, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086316879","display_name":"Jihong Guan","orcid":"https://orcid.org/0000-0003-2313-7635"},"institutions":[{"id":"https://openalex.org/I116953780","display_name":"Tongji University","ror":"https://ror.org/03rc6as71","country_code":"CN","type":"education","lineage":["https://openalex.org/I116953780"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jihong Guan","raw_affiliation_strings":["Department of Computer Science and Technology, Tongji University, 4800 Caoan Road, Shanghai, 201804, China","Department of Computer Science and Technology, Tongji University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Technology, Tongji University, 4800 Caoan Road, Shanghai, 201804, China","institution_ids":["https://openalex.org/I116953780"]},{"raw_affiliation_string":"Department of Computer Science and Technology, Tongji University, Shanghai, China","institution_ids":["https://openalex.org/I116953780"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5017862559","display_name":"Shuigeng Zhou","orcid":"https://orcid.org/0000-0002-1949-2768"},"institutions":[{"id":"https://openalex.org/I24943067","display_name":"Fudan University","ror":"https://ror.org/013q1eq08","country_code":"CN","type":"education","lineage":["https://openalex.org/I24943067"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Shuigeng Zhou","raw_affiliation_strings":["Shanghai Key Lab of Intelligent Information Processing, and School of Computer Science, Fudan University, 220 Handan Road, Shanghai, 200433, China. sgzhou@fudan.edu.cn","Shanghai Key Lab of Intelligent Information Processing, and School of Computer Science, Fudan University, Shanghai, China"],"raw_orcid":"https://orcid.org/0000-0002-1949-2768","affiliations":[{"raw_affiliation_string":"Shanghai Key Lab of Intelligent Information Processing, and School of Computer Science, Fudan University, 220 Handan Road, Shanghai, 200433, China. sgzhou@fudan.edu.cn","institution_ids":["https://openalex.org/I24943067"]},{"raw_affiliation_string":"Shanghai Key Lab of Intelligent Information Processing, and School of Computer Science, Fudan University, Shanghai, China","institution_ids":["https://openalex.org/I24943067"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5017862559"],"corresponding_institution_ids":["https://openalex.org/I24943067"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.3705,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.54833008,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"22","issue":"S6","first_page":"130","last_page":"130"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.003599999938160181,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.0010999999940395355,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.8633724451065063},{"id":"https://openalex.org/keywords/weighting","display_name":"Weighting","score":0.7987340688705444},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.6532468199729919},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5979211330413818},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.5837498903274536},{"id":"https://openalex.org/keywords/feature","display_name":"Feature (linguistics)","score":0.5337406396865845},{"id":"https://openalex.org/keywords/clustering-high-dimensional-data","display_name":"Clustering high-dimensional data","score":0.47008419036865234},{"id":"https://openalex.org/keywords/consensus-clustering","display_name":"Consensus clustering","score":0.4584488570690155},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.4245191812515259},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.41039395332336426},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3883044719696045},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.38417184352874756},{"id":"https://openalex.org/keywords/correlation-clustering","display_name":"Correlation clustering","score":0.3443288803100586},{"id":"https://openalex.org/keywords/cure-data-clustering-algorithm","display_name":"CURE data clustering algorithm","score":0.25244414806365967}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.8633724451065063},{"id":"https://openalex.org/C183115368","wikidata":"https://www.wikidata.org/wiki/Q856577","display_name":"Weighting","level":2,"score":0.7987340688705444},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.6532468199729919},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5979211330413818},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.5837498903274536},{"id":"https://openalex.org/C2776401178","wikidata":"https://www.wikidata.org/wiki/Q12050496","display_name":"Feature (linguistics)","level":2,"score":0.5337406396865845},{"id":"https://openalex.org/C184509293","wikidata":"https://www.wikidata.org/wiki/Q5136711","display_name":"Clustering high-dimensional data","level":3,"score":0.47008419036865234},{"id":"https://openalex.org/C186767784","wikidata":"https://www.wikidata.org/wiki/Q5162841","display_name":"Consensus clustering","level":5,"score":0.4584488570690155},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.4245191812515259},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.41039395332336426},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3883044719696045},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.38417184352874756},{"id":"https://openalex.org/C94641424","wikidata":"https://www.wikidata.org/wiki/Q5172845","display_name":"Correlation clustering","level":3,"score":0.3443288803100586},{"id":"https://openalex.org/C33704608","wikidata":"https://www.wikidata.org/wiki/Q5014717","display_name":"CURE data clustering algorithm","level":4,"score":0.25244414806365967},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020733","descriptor_name":"RNA, Small Cytoplasmic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020733","descriptor_name":"RNA, Small Cytoplasmic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020733","descriptor_name":"RNA, Small Cytoplasmic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020733","descriptor_name":"RNA, Small Cytoplasmic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-021-04033-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04033-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04033-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:34078287","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/34078287","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:4eebe7b57e324616af7fccf1d04ff6fb","is_oa":true,"landing_page_url":"https://doaj.org/article/4eebe7b57e324616af7fccf1d04ff6fb","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 22, Iss S6, Pp 1-16 (2021)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:8171019","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/8171019","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-021-04033-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-021-04033-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-021-04033-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1487418658","display_name":"\u5355\u7ec6\u80deRNA\u6d4b\u5e8f\u6570\u636e\u805a\u7c7b\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61972100","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2504302143","display_name":"\u57fa\u4e8e\u8ba1\u7b97\u7684\u86cb\u767d\u8d28\u590d\u5408\u7269\u68c0\u6d4b\u65b0\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61772367","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4924742943","display_name":null,"funder_award_id":"2016YFC0901704","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3164749183.pdf","grobid_xml":"https://content.openalex.org/works/W3164749183.grobid-xml"},"referenced_works_count":68,"referenced_works":["https://openalex.org/W1505807419","https://openalex.org/W1536902151","https://openalex.org/W1673310716","https://openalex.org/W1813068103","https://openalex.org/W1967327758","https://openalex.org/W1977112287","https://openalex.org/W1979283544","https://openalex.org/W1982900838","https://openalex.org/W1993046026","https://openalex.org/W1998871699","https://openalex.org/W2007439698","https://openalex.org/W2019552331","https://openalex.org/W2020069326","https://openalex.org/W2045964207","https://openalex.org/W2051224630","https://openalex.org/W2051658465","https://openalex.org/W2056355453","https://openalex.org/W2068881679","https://openalex.org/W2069089843","https://openalex.org/W2073459066","https://openalex.org/W2084942072","https://openalex.org/W2107680358","https://openalex.org/W2109890799","https://openalex.org/W2120205807","https://openalex.org/W2121690903","https://openalex.org/W2132143884","https://openalex.org/W2133777675","https://openalex.org/W2133811295","https://openalex.org/W2149573463","https://openalex.org/W2152494044","https://openalex.org/W2165835468","https://openalex.org/W2171501288","https://openalex.org/W2187089797","https://openalex.org/W2193667971","https://openalex.org/W2306630387","https://openalex.org/W2307567449","https://openalex.org/W2349814691","https://openalex.org/W2400361659","https://openalex.org/W2460637143","https://openalex.org/W2473258837","https://openalex.org/W2519132385","https://openalex.org/W2522945402","https://openalex.org/W2586637063","https://openalex.org/W2598326928","https://openalex.org/W2605810679","https://openalex.org/W2606771561","https://openalex.org/W2616922646","https://openalex.org/W2622807556","https://openalex.org/W2739329039","https://openalex.org/W2774644977","https://openalex.org/W2788348358","https://openalex.org/W2794521141","https://openalex.org/W2794891507","https://openalex.org/W2801820889","https://openalex.org/W2884197618","https://openalex.org/W2901677030","https://openalex.org/W2902652978","https://openalex.org/W2941910667","https://openalex.org/W2951381561","https://openalex.org/W2951506174","https://openalex.org/W2952303649","https://openalex.org/W2953251392","https://openalex.org/W2953301646","https://openalex.org/W3049679592","https://openalex.org/W4232436772","https://openalex.org/W4233637541","https://openalex.org/W4235169531","https://openalex.org/W4239026366"],"related_works":["https://openalex.org/W2199594781","https://openalex.org/W2594747375","https://openalex.org/W3035964814","https://openalex.org/W2311450085","https://openalex.org/W3124860551","https://openalex.org/W2965089876","https://openalex.org/W2953854373","https://openalex.org/W3020292803","https://openalex.org/W2556924671","https://openalex.org/W4232587025"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,23,100],"rapid":[2],"development":[3],"of":[4,12,25,39,44,51,137,146,160],"single-cell":[5],"RNA":[6],"sequencing":[7],"(scRNA-seq)":[8],"enables":[9],"the":[10,35,42,83,111,134,144,151,158],"exploration":[11],"cell":[13,47],"heterogeneity,":[14],"which":[15,54,93],"is":[16,29,50,94,165,185],"usually":[17],"done":[18],"by":[19,33],"scRNA-seq":[20,26,126,139,161,168,190],"data":[21,27,140,169,191],"clustering.":[22],"essence":[24],"clustering":[28,58,84,135,141,170],"to":[30,73,173],"group":[31],"cells":[32],"measuring":[34],"similarities":[36],"among":[37],"genes/transcripts":[38],"cells.":[40],"And":[41],"selection":[43,176],"features":[45],"for":[46,97,189],"similarity":[48],"evaluation":[49],"great":[52],"importance,":[53],"will":[55],"significantly":[56],"impact":[57],"effectiveness":[59],"and":[60,183],"efficiency.":[61],"RESULTS:":[62],"In":[63],"this":[64],"paper,":[65],"we":[66],"propose":[67],"a":[68,89,186],"novel":[69],"method":[70,171],"called":[71],"CaFew":[72,87,130,147,155,164],"select":[74],"genes":[75,101,112],"based":[76,178],"on":[77,123,179],"cluster-aware":[78,180],"feature":[79,90,98,181],"weighting.":[80],"By":[81],"optimizing":[82],"objective":[85],"function,":[86],"obtains":[88],"weight":[91],"matrix,":[92],"further":[95],"used":[96],"selection.":[99],"have":[102],"large":[103],"weights":[104,114],"in":[105,117],"at":[106],"least":[107],"one":[108],"cluster":[109],"or":[110],"whose":[113],"vary":[115],"greatly":[116],"different":[118],"clusters":[119],"are":[120],"selected.":[121],"Experiments":[122],"8":[124],"real":[125],"datasets":[127],"show":[128],"that":[129],"can":[131],"obviously":[132],"improve":[133],"performance":[136],"existing":[138],"methods.":[142],"Particularly,":[143],"combination":[145],"with":[148],"SC3":[149],"achieves":[150],"state-of-art":[152],"performance.":[153],"Furthermore,":[154],"also":[156],"benefits":[157],"visualization":[159],"data.":[162],"CONCLUSION:":[163],"an":[166],"effective":[167],"due":[172],"its":[174],"gene":[175],"mechanism":[177],"weighting,":[182],"it":[184],"useful":[187],"tool":[188],"analysis.":[192]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":3}],"updated_date":"2026-08-06T08:24:18.245995","created_date":"2025-10-10T00:00:00"}
