{"id":"https://openalex.org/W3119104463","doi":"https://doi.org/10.1186/s12859-020-03938-z","title":"DISTEVAL: a web server for evaluating predicted protein distances","display_name":"DISTEVAL: a web server for evaluating predicted protein distances","publication_year":2021,"publication_date":"2021-01-06","ids":{"openalex":"https://openalex.org/W3119104463","doi":"https://doi.org/10.1186/s12859-020-03938-z","mag":"3119104463","pmid":"https://pubmed.ncbi.nlm.nih.gov/33407077"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-020-03938-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03938-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03938-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03938-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5071481060","display_name":"Badri Adhikari","orcid":"https://orcid.org/0000-0002-1547-0238"},"institutions":[{"id":"https://openalex.org/I208333798","display_name":"University of Missouri\u2013St. Louis","ror":"https://ror.org/037cnag11","country_code":"US","type":"education","lineage":["https://openalex.org/I208333798"]},{"id":"https://openalex.org/I4210150018","display_name":"Express Scripts Holding Company (United States)","ror":"https://ror.org/04fgasy98","country_code":"US","type":"company","lineage":["https://openalex.org/I4210150018"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Badri Adhikari","raw_affiliation_strings":["Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA. adhikarib@umsl.edu","Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA"],"raw_orcid":"https://orcid.org/0000-0002-1547-0238","affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA. adhikarib@umsl.edu","institution_ids":["https://openalex.org/I4210150018","https://openalex.org/I208333798"]},{"raw_affiliation_string":"Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA","institution_ids":["https://openalex.org/I208333798"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028280128","display_name":"Bikash Shrestha","orcid":"https://orcid.org/0000-0001-6349-3007"},"institutions":[{"id":"https://openalex.org/I208333798","display_name":"University of Missouri\u2013St. Louis","ror":"https://ror.org/037cnag11","country_code":"US","type":"education","lineage":["https://openalex.org/I208333798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bikash Shrestha","raw_affiliation_strings":["Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA","institution_ids":["https://openalex.org/I208333798"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051058718","display_name":"Matthew Bernardini","orcid":null},"institutions":[{"id":"https://openalex.org/I208333798","display_name":"University of Missouri\u2013St. Louis","ror":"https://ror.org/037cnag11","country_code":"US","type":"education","lineage":["https://openalex.org/I208333798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Bernardini","raw_affiliation_strings":["Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA","institution_ids":["https://openalex.org/I208333798"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022495891","display_name":"Jie Hou","orcid":"https://orcid.org/0000-0002-8584-5154"},"institutions":[{"id":"https://openalex.org/I47838141","display_name":"Saint Louis University","ror":"https://ror.org/01p7jjy08","country_code":"US","type":"education","lineage":["https://openalex.org/I47838141"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jie Hou","raw_affiliation_strings":["Department of Computer Science, Saint Louis University, 217 Ritter Hall, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Saint Louis University, 217 Ritter Hall, St. Louis, MO, USA","institution_ids":["https://openalex.org/I47838141"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5108737646","display_name":"Jamie Lea","orcid":null},"institutions":[{"id":"https://openalex.org/I208333798","display_name":"University of Missouri\u2013St. Louis","ror":"https://ror.org/037cnag11","country_code":"US","type":"education","lineage":["https://openalex.org/I208333798"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jamie Lea","raw_affiliation_strings":["Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of Missouri-St. Louis, 312 Express Scripts Hall, St. Louis, MO, USA","institution_ids":["https://openalex.org/I208333798"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5071481060"],"corresponding_institution_ids":["https://openalex.org/I208333798","https://openalex.org/I4210150018"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.8956,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.71939843,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"22","issue":"1","first_page":"8","last_page":"8"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.8820000290870667,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.8820000290870667,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.06379999965429306,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.00419999985024333,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.685282826423645},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5960869193077087},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5699536204338074},{"id":"https://openalex.org/keywords/complement","display_name":"Complement (music)","score":0.5100827813148499},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.4935954809188843},{"id":"https://openalex.org/keywords/mean-squared-error","display_name":"Mean squared error","score":0.4375557005405426},{"id":"https://openalex.org/keywords/binary-number","display_name":"Binary number","score":0.43362191319465637},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.4007072448730469},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3300463557243347},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.2939993739128113},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.2787648141384125},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1841176450252533},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.10753881931304932}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.685282826423645},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5960869193077087},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5699536204338074},{"id":"https://openalex.org/C112313634","wikidata":"https://www.wikidata.org/wiki/Q7886648","display_name":"Complement (music)","level":5,"score":0.5100827813148499},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.4935954809188843},{"id":"https://openalex.org/C139945424","wikidata":"https://www.wikidata.org/wiki/Q1940696","display_name":"Mean squared error","level":2,"score":0.4375557005405426},{"id":"https://openalex.org/C48372109","wikidata":"https://www.wikidata.org/wiki/Q3913","display_name":"Binary number","level":2,"score":0.43362191319465637},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.4007072448730469},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3300463557243347},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.2939993739128113},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.2787648141384125},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1841176450252533},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.10753881931304932},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C94375191","wikidata":"https://www.wikidata.org/wiki/Q11205","display_name":"Arithmetic","level":1,"score":0.0},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.0},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0},{"id":"https://openalex.org/C188082640","wikidata":"https://www.wikidata.org/wiki/Q1780899","display_name":"Complementation","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000596","descriptor_name":"Amino Acids","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-020-03938-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03938-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03938-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33407077","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33407077","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:93795621234d4cc69e899420b5353d4b","is_oa":true,"landing_page_url":"https://doaj.org/article/93795621234d4cc69e899420b5353d4b","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 22, Iss 1, Pp 1-9 (2021)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:6700407","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC7788990","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:7788990","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7788990","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-020-03938-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03938-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03938-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5603109283","display_name":null,"funder_award_id":"1948117","funder_id":"https://openalex.org/F4320332169","funder_display_name":"Directorate for Computer and Information Science and Engineering"},{"id":"https://openalex.org/G7335678853","display_name":"CRII: III: Deep Learning Methods for Protein Inter-residue Distance Prediction","funder_award_id":"1948117","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320309568","display_name":"University of Missouri","ror":"https://ror.org/02ymw8z06"},{"id":"https://openalex.org/F4320332169","display_name":"Directorate for Computer and Information Science and Engineering","ror":"https://ror.org/025kzpk63"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3119104463.pdf","grobid_xml":"https://content.openalex.org/works/W3119104463.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1987027200","https://openalex.org/W2008708467","https://openalex.org/W2011703027","https://openalex.org/W2140673705","https://openalex.org/W2145991251","https://openalex.org/W2159051505","https://openalex.org/W2161151688","https://openalex.org/W2547574709","https://openalex.org/W2560695073","https://openalex.org/W2765742208","https://openalex.org/W2923775987","https://openalex.org/W2960589734","https://openalex.org/W2962831078","https://openalex.org/W2968295962","https://openalex.org/W2971003495","https://openalex.org/W2977360892","https://openalex.org/W2980272550","https://openalex.org/W2983571096","https://openalex.org/W2997234557","https://openalex.org/W3004972593","https://openalex.org/W3048060386","https://openalex.org/W3048900928"],"related_works":["https://openalex.org/W2068608913","https://openalex.org/W3124914020","https://openalex.org/W2382566571","https://openalex.org/W2141033859","https://openalex.org/W2077542787","https://openalex.org/W2156434174","https://openalex.org/W2071701083","https://openalex.org/W2349321798","https://openalex.org/W2366686860","https://openalex.org/W2383687187"],"abstract_inverted_index":{"BACKGROUND:":[0],"Protein":[1,59],"inter-residue":[2,124],"contact":[3,39,176],"and":[4,26,110,133,146,155,175,187,197,203],"distance":[5],"prediction":[6,19,40,89],"are":[7,30,92,112],"two":[8,22],"key":[9],"intermediate":[10],"steps":[11],"essential":[12],"to":[13,140],"accurate":[14],"protein":[15],"structure":[16,136],"prediction.":[17,104],"Distance":[18],"comes":[20],"in":[21,51,206],"forms:":[23],"real-valued":[24],"distances":[25],"'binned'":[27],"distograms,":[28],"which":[29,85],"a":[31,48,103,118,134,191,210],"more":[32],"finely":[33],"grained":[34],"variant":[35],"of":[36,56,69,102,150,200,209],"the":[37,52,66,87,99,207],"binary":[38],"problem.":[41],"The":[42,158,179],"latter":[43],"has":[44],"been":[45],"introduced":[46],"as":[47,137,167,190],"new":[49,108],"challenge":[50],"14th":[53],"Critical":[54],"Assessment":[55],"Techniques":[57],"for":[58,71,77,121,194],"Structure":[60],"Prediction":[61],"(CASP14)":[62],"2020":[63],"experiment.":[64],"Despite":[65],"recent":[67],"proliferation":[68],"methods":[70,75,109],"predicting":[72],"distances,":[73,132,204],"few":[74],"exist":[76],"evaluating":[78,122],"these":[79,151],"predictions.":[80],"Currently":[81],"only":[82],"numerical":[83],"metrics,":[84],"evaluate":[86],"entire":[88],"at":[90],"once,":[91],"used.":[93],"These":[94],"give":[95],"no":[96],"insight":[97],"into":[98],"structural":[100],"details":[101],"For":[105],"this":[106],"reason,":[107],"tools":[111],"needed.":[113],"RESULTS:":[114],"We":[115],"have":[116],"developed":[117],"web":[119],"server":[120,159],"predicted":[123,130,201],"distances.":[125],"Our":[126],"server,":[127],"DISTEVAL,":[128],"accepts":[129],"contacts,":[131],"true":[135,211],"optional":[138],"inputs":[139],"generate":[141],"informative":[142],"heatmaps,":[143],"chord":[144],"diagrams,":[145],"3D":[147,212],"models.":[148],"All":[149],"outputs":[152],"facilitate":[153],"visual":[154],"qualitative":[156,198],"assessment.":[157],"also":[160],"evaluates":[161],"predictions":[162],"using":[163],"other":[164,186],"metrics":[165],"such":[166],"mean":[168,172],"absolute":[169],"error,":[170,174],"root":[171],"squared":[173],"precision.":[177],"CONCLUSIONS:":[178],"visualizations":[180],"generated":[181],"by":[182],"DISTEVAL":[183],"complement":[184],"each":[185],"collectively":[188],"serve":[189],"powerful":[192],"tool":[193],"both":[195],"quantitative":[196],"assessments":[199],"contacts":[202],"even":[205],"absence":[208],"structure.":[213]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1}],"updated_date":"2026-06-22T08:00:12.763002","created_date":"2025-10-10T00:00:00"}
