{"id":"https://openalex.org/W3108020655","doi":"https://doi.org/10.1186/s12859-020-03831-9","title":"Tissue-associated microbial detection in cancer using human sequencing data","display_name":"Tissue-associated microbial detection in cancer using human sequencing data","publication_year":2020,"publication_date":"2020-12-01","ids":{"openalex":"https://openalex.org/W3108020655","doi":"https://doi.org/10.1186/s12859-020-03831-9","mag":"3108020655","pmid":"https://pubmed.ncbi.nlm.nih.gov/33272199"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-020-03831-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03831-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03831-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03831-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065552857","display_name":"Rebecca Rodriguez","orcid":"https://orcid.org/0000-0002-5772-5518"},"institutions":[{"id":"https://openalex.org/I117965899","display_name":"University of Hawai\u02bbi at M\u0101noa","ror":"https://ror.org/01wspgy28","country_code":"US","type":"education","lineage":["https://openalex.org/I117965899"]},{"id":"https://openalex.org/I149581226","display_name":"Hawaii Pacific University","ror":"https://ror.org/01963ay88","country_code":"US","type":"education","lineage":["https://openalex.org/I149581226"]},{"id":"https://openalex.org/I4210090567","display_name":"National Institute of Diabetes and Digestive and Kidney Diseases","ror":"https://ror.org/00adh9b73","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210090567"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rebecca M. Rodriguez","raw_affiliation_strings":["Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA","NIDDK Central Repository, National Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, USA","Population Sciences in the Pacific Program-Cancer Epidemiology, Honolulu, HI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA","institution_ids":["https://openalex.org/I117965899"]},{"raw_affiliation_string":"NIDDK Central Repository, National Institute of Diabetes and Digestive and Kidney Diseases, NIH, Bethesda, USA","institution_ids":["https://openalex.org/I4210090567"]},{"raw_affiliation_string":"Population Sciences in the Pacific Program-Cancer Epidemiology, Honolulu, HI, USA","institution_ids":["https://openalex.org/I149581226"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030130280","display_name":"Vedbar S. Khadka","orcid":"https://orcid.org/0000-0002-8652-2904"},"institutions":[{"id":"https://openalex.org/I117965899","display_name":"University of Hawai\u02bbi at M\u0101noa","ror":"https://ror.org/01wspgy28","country_code":"US","type":"education","lineage":["https://openalex.org/I117965899"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Vedbar S. Khadka","raw_affiliation_strings":["Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA. vedbar@hawaii.edu","Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA"],"raw_orcid":"https://orcid.org/0000-0002-8652-2904","affiliations":[{"raw_affiliation_string":"Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA. vedbar@hawaii.edu","institution_ids":["https://openalex.org/I117965899"]},{"raw_affiliation_string":"Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA","institution_ids":["https://openalex.org/I117965899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074286598","display_name":"Mark Menor","orcid":null},"institutions":[{"id":"https://openalex.org/I117965899","display_name":"University of Hawai\u02bbi at M\u0101noa","ror":"https://ror.org/01wspgy28","country_code":"US","type":"education","lineage":["https://openalex.org/I117965899"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark Menor","raw_affiliation_strings":["Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA","institution_ids":["https://openalex.org/I117965899"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028148105","display_name":"Brenda Y. Hernandez","orcid":"https://orcid.org/0000-0003-0132-4042"},"institutions":[{"id":"https://openalex.org/I117965899","display_name":"University of Hawai\u02bbi at M\u0101noa","ror":"https://ror.org/01wspgy28","country_code":"US","type":"education","lineage":["https://openalex.org/I117965899"]},{"id":"https://openalex.org/I1331384533","display_name":"University of Hawaii System","ror":"https://ror.org/03tzaeb71","country_code":"US","type":"education","lineage":["https://openalex.org/I1331384533"]},{"id":"https://openalex.org/I149581226","display_name":"Hawaii Pacific University","ror":"https://ror.org/01963ay88","country_code":"US","type":"education","lineage":["https://openalex.org/I149581226"]},{"id":"https://openalex.org/I4210093646","display_name":"Cancer Center of Hawaii","ror":"https://ror.org/0065jhh26","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210093646"]},{"id":"https://openalex.org/I4390039246","display_name":"University of Hawaii Cancer Center","ror":"https://ror.org/00kt3nk56","country_code":null,"type":"healthcare","lineage":["https://openalex.org/I4390039246"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Brenda Y. Hernandez","raw_affiliation_strings":["Epidemiology, University of Hawaii Cancer Center, University of Hawaii, Honolulu, HI, USA. brenda@cc.hawaii.edu","Population Sciences in the Pacific Program-Cancer Epidemiology, Honolulu, HI, USA. brenda@cc.hawaii.edu","Epidemiology, University of Hawaii Cancer Center, University of Hawaii, Honolulu, HI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Epidemiology, University of Hawaii Cancer Center, University of Hawaii, Honolulu, HI, USA. brenda@cc.hawaii.edu","institution_ids":["https://openalex.org/I4210093646","https://openalex.org/I1331384533"]},{"raw_affiliation_string":"Population Sciences in the Pacific Program-Cancer Epidemiology, Honolulu, HI, USA. brenda@cc.hawaii.edu","institution_ids":["https://openalex.org/I149581226","https://openalex.org/I4210093646"]},{"raw_affiliation_string":"Epidemiology, University of Hawaii Cancer Center, University of Hawaii, Honolulu, HI, USA","institution_ids":["https://openalex.org/I117965899","https://openalex.org/I1331384533","https://openalex.org/I4390039246"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042435594","display_name":"Youping Deng","orcid":"https://orcid.org/0000-0002-5951-8213"},"institutions":[{"id":"https://openalex.org/I117965899","display_name":"University of Hawai\u02bbi at M\u0101noa","ror":"https://ror.org/01wspgy28","country_code":"US","type":"education","lineage":["https://openalex.org/I117965899"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Youping Deng","raw_affiliation_strings":["Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA. dengy@hawaii.edu","Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA. dengy@hawaii.edu","institution_ids":["https://openalex.org/I117965899"]},{"raw_affiliation_string":"Bioinformatics Core, Department of Quantitative Health Sciences, John A. Burns School of Medicine, University of Hawaii, M\u0101noa, Honolulu, HI, USA","institution_ids":["https://openalex.org/I117965899"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.5221,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.62074753,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"21","issue":"S9","first_page":"523","last_page":"523"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9821000099182129,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.6547940373420715},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5843316316604614},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.47327470779418945},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.4429894685745239},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2759666442871094},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20791590213775635},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12958943843841553}],"concepts":[{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.6547940373420715},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5843316316604614},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.47327470779418945},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.4429894685745239},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2759666442871094},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20791590213775635},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12958943843841553}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000382","qualifier_name":"microbiology","is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-020-03831-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03831-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03831-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33272199","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33272199","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:2ca4ba51f7c743c882964a409a15b815","is_oa":true,"landing_page_url":"https://doaj.org/article/2ca4ba51f7c743c882964a409a15b815","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 21, Iss S9, Pp 1-15 (2020)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7713026","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7713026","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-020-03831-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03831-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03831-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8500000238418579,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[{"id":"https://openalex.org/G1446077644","display_name":null,"funder_award_id":"U54 MD007601","funder_id":"https://openalex.org/F4320337534","funder_display_name":"National Institute on Minority Health and Health Disparities"},{"id":"https://openalex.org/G155562842","display_name":null,"funder_award_id":"R01 CA230514","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G1722800848","display_name":null,"funder_award_id":"2U54MD007601-32","funder_id":"https://openalex.org/F4320337534","funder_display_name":"National Institute on Minority Health and Health Disparities"},{"id":"https://openalex.org/G1963501822","display_name":null,"funder_award_id":"U54MD007584","funder_id":"https://openalex.org/F4320337534","funder_display_name":"National Institute on Minority Health and Health Disparities"},{"id":"https://openalex.org/G3463232044","display_name":null,"funder_award_id":"P20GM103466","funder_id":"https://openalex.org/F4320337534","funder_display_name":"National Institute on Minority Health and Health Disparities"},{"id":"https://openalex.org/G3538213265","display_name":null,"funder_award_id":"P30 GM114737","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G3772728979","display_name":null,"funder_award_id":"5R01CA223490","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4158199195","display_name":null,"funder_award_id":"5R01CA230514","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4981486250","display_name":null,"funder_award_id":"5P30GM114737","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5376046877","display_name":null,"funder_award_id":"P20 GM103466","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7390220446","display_name":null,"funder_award_id":"P30 CA071789","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"},{"id":"https://openalex.org/G8021143354","display_name":null,"funder_award_id":"U54 MD007584","funder_id":"https://openalex.org/F4320337534","funder_display_name":"National Institute on Minority Health and Health Disparities"},{"id":"https://openalex.org/G8322275249","display_name":null,"funder_award_id":"P20GM103466","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G971811331","display_name":null,"funder_award_id":"R01 CA223490","funder_id":"https://openalex.org/F4320337351","funder_display_name":"National Cancer Institute"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337534","display_name":"National Institute on Minority Health and Health Disparities","ror":"https://ror.org/0493hgw16"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3108020655.pdf","grobid_xml":"https://content.openalex.org/works/W3108020655.grobid-xml"},"referenced_works_count":88,"referenced_works":["https://openalex.org/W855819222","https://openalex.org/W1433995531","https://openalex.org/W1496050929","https://openalex.org/W1577822803","https://openalex.org/W1607743621","https://openalex.org/W1972616341","https://openalex.org/W1981959283","https://openalex.org/W1986685158","https://openalex.org/W1988460088","https://openalex.org/W1997001969","https://openalex.org/W2011411661","https://openalex.org/W2016853666","https://openalex.org/W2026280106","https://openalex.org/W2040000055","https://openalex.org/W2049397238","https://openalex.org/W2062323063","https://openalex.org/W2070791418","https://openalex.org/W2073978775","https://openalex.org/W2076030198","https://openalex.org/W2083922582","https://openalex.org/W2085800524","https://openalex.org/W2091564291","https://openalex.org/W2096139589","https://openalex.org/W2098521327","https://openalex.org/W2106533426","https://openalex.org/W2107097628","https://openalex.org/W2110082875","https://openalex.org/W2110300022","https://openalex.org/W2112067277","https://openalex.org/W2113236070","https://openalex.org/W2120335773","https://openalex.org/W2122131141","https://openalex.org/W2126493747","https://openalex.org/W2128769815","https://openalex.org/W2133384306","https://openalex.org/W2137662380","https://openalex.org/W2140000393","https://openalex.org/W2140481064","https://openalex.org/W2140679462","https://openalex.org/W2143841612","https://openalex.org/W2144464830","https://openalex.org/W2145767845","https://openalex.org/W2151566934","https://openalex.org/W2159454395","https://openalex.org/W2163436770","https://openalex.org/W2170181743","https://openalex.org/W2170552969","https://openalex.org/W2177333410","https://openalex.org/W2211038293","https://openalex.org/W2235523093","https://openalex.org/W2262529275","https://openalex.org/W2310259903","https://openalex.org/W2317207520","https://openalex.org/W2338446464","https://openalex.org/W2394170340","https://openalex.org/W2401225309","https://openalex.org/W2413018738","https://openalex.org/W2461220095","https://openalex.org/W2464938966","https://openalex.org/W2480418585","https://openalex.org/W2502589106","https://openalex.org/W2523160024","https://openalex.org/W2549976854","https://openalex.org/W2558888782","https://openalex.org/W2560263020","https://openalex.org/W2560809255","https://openalex.org/W2577549478","https://openalex.org/W2581589058","https://openalex.org/W2587359681","https://openalex.org/W2589364081","https://openalex.org/W2605390273","https://openalex.org/W2616962711","https://openalex.org/W2663374310","https://openalex.org/W2753577117","https://openalex.org/W2761207927","https://openalex.org/W2766666809","https://openalex.org/W2771514310","https://openalex.org/W2781525129","https://openalex.org/W2801603607","https://openalex.org/W2801905545","https://openalex.org/W2888696120","https://openalex.org/W2949947154","https://openalex.org/W3010810358","https://openalex.org/W3011607225","https://openalex.org/W3017322058","https://openalex.org/W3045856226","https://openalex.org/W4211131199","https://openalex.org/W4297855338"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W2013243191","https://openalex.org/W2151865869","https://openalex.org/W2117258802"],"abstract_inverted_index":{"Cancer":[0],"is":[1,34,71],"one":[2],"of":[3,7,21,61,131],"the":[4,12,22,43,59,129],"leading":[5],"causes":[6],"morbidity":[8],"and":[9,36,40,52,93,133],"mortality":[10],"in":[11,77,128],"globe.":[13],"Microbiological":[14],"infections":[15],"account":[16],"for":[17,74],"up":[18],"to":[19,49,86,97,113],"20%":[20],"total":[23],"global":[24],"cancer":[25],"burden.":[26],"The":[27],"human":[28,44],"microbiota":[29],"within":[30],"each":[31],"organ":[32],"system":[33],"distinct,":[35],"their":[37],"compositional":[38,122],"variation":[39],"interactions":[41],"with":[42,124],"host":[45],"have":[46,83],"been":[47,84],"known":[48],"attribute":[50],"detrimental":[51],"beneficial":[53],"effects":[54],"on":[55],"tumor":[56],"progression.":[57],"With":[58],"advent":[60],"next":[62],"generation":[63],"sequencing":[64],"(NGS)":[65],"technologies,":[66],"data":[67,92,110],"generated":[68],"from":[69,90],"NGS":[70,109],"being":[72],"used":[73],"pathogen":[75],"detection":[76],"cancer.":[78],"Numerous":[79],"bioinformatics":[80],"computational":[81,105],"frameworks":[82,106],"developed":[85],"study":[87],"viral":[88],"information":[89],"host-sequencing":[91],"can":[94,119],"be":[95],"adapted":[96],"bacterial":[98],"studies.":[99],"This":[100],"review":[101],"highlights":[102],"existing":[103],"popular":[104],"that":[107],"utilize":[108],"as":[111],"input":[112],"decipher":[114],"microbial":[115],"composition,":[116],"which":[117],"output":[118],"predict":[120],"functional":[121],"differences":[123],"clinically":[125],"relevant":[126],"applicability":[127],"development":[130],"treatment":[132],"prevention":[134],"strategies.":[135]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
