{"id":"https://openalex.org/W3091027434","doi":"https://doi.org/10.1186/s12859-020-03769-y","title":"C3: connect separate connected components to form a succinct disease module","display_name":"C3: connect separate connected components to form a succinct disease module","publication_year":2020,"publication_date":"2020-10-02","ids":{"openalex":"https://openalex.org/W3091027434","doi":"https://doi.org/10.1186/s12859-020-03769-y","mag":"3091027434","pmid":"https://pubmed.ncbi.nlm.nih.gov/33008305"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-020-03769-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03769-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03769-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03769-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054607668","display_name":"Bingbo Wang","orcid":"https://orcid.org/0000-0002-1808-1852"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Bingbo Wang","raw_affiliation_strings":["School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China. bingbowang@xidian.edu.cn","School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":"https://orcid.org/0000-0002-1808-1852","affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China. bingbowang@xidian.edu.cn","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001796347","display_name":"Jie Hu","orcid":"https://orcid.org/0000-0001-8282-4895"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jie Hu","raw_affiliation_strings":["School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5115694716","display_name":"Yajun Wang","orcid":"https://orcid.org/0000-0003-3875-6236"},"institutions":[{"id":"https://openalex.org/I180632629","display_name":"Xi'an International Studies University","ror":"https://ror.org/05gcme754","country_code":"CN","type":"education","lineage":["https://openalex.org/I180632629"]},{"id":"https://openalex.org/I4210115513","display_name":"Xi\u2019an University","ror":"https://ror.org/01zzmf129","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210115513"]},{"id":"https://openalex.org/I4210131919","display_name":"Xi'an University of Technology","ror":"https://ror.org/038avdt50","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210131919"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yajun Wang","raw_affiliation_strings":["School of Humanities and Foreign Languages, Xi'an University of Technology, Xi'an, People's Republic of China","School of Humanities and Foreign Languages, Xi\u2019an University of Technology, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Humanities and Foreign Languages, Xi'an University of Technology, Xi'an, People's Republic of China","institution_ids":["https://openalex.org/I180632629","https://openalex.org/I4210115513","https://openalex.org/I4210131919"]},{"raw_affiliation_string":"School of Humanities and Foreign Languages, Xi\u2019an University of Technology, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4210131919"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038826336","display_name":"Chenxing Zhang","orcid":null},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chenxing Zhang","raw_affiliation_strings":["School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015277687","display_name":"Yuanjun Zhou","orcid":null},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuanjun Zhou","raw_affiliation_strings":["School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5054977113","display_name":"Liang Yu","orcid":"https://orcid.org/0000-0002-8351-3332"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liang Yu","raw_affiliation_strings":["School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111166735","display_name":"Xingli Guo","orcid":"https://orcid.org/0000-0002-1199-7120"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xingli Guo","raw_affiliation_strings":["School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060109811","display_name":"Lin Gao","orcid":"https://orcid.org/0000-0001-6396-0787"},"institutions":[{"id":"https://openalex.org/I149594827","display_name":"Xidian University","ror":"https://ror.org/05s92vm98","country_code":"CN","type":"education","lineage":["https://openalex.org/I149594827"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Gao","raw_affiliation_strings":["School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi'an, People's Republic of China","institution_ids":["https://openalex.org/I149594827"]},{"raw_affiliation_string":"School of Computer Science and Technology, Xidian University, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I149594827"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019213324","display_name":"Yun\u2010Ru Chen","orcid":"https://orcid.org/0000-0002-6596-6338"},"institutions":[{"id":"https://openalex.org/I4210121771","display_name":"First Affiliated Hospital of Xi'an Jiaotong University","ror":"https://ror.org/02tbvhh96","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210121771"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yunru Chen","raw_affiliation_strings":["The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, People's Republic of China. chenyunru_2002@xjtu.edu.cn","The First Affiliated Hospital of Xi\u2019an Jiaotong University, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The First Affiliated Hospital of Xi'an Jiaotong University, Xi'an, People's Republic of China. chenyunru_2002@xjtu.edu.cn","institution_ids":["https://openalex.org/I4210121771"]},{"raw_affiliation_string":"The First Affiliated Hospital of Xi\u2019an Jiaotong University, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I4210121771"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5019213324","https://openalex.org/A5054607668"],"corresponding_institution_ids":["https://openalex.org/I149594827","https://openalex.org/I4210121771"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.5964,"has_fulltext":true,"cited_by_count":9,"citation_normalized_percentile":{"value":0.64097945,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"21","issue":"1","first_page":"433","last_page":"433"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9739000201225281,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9739000201225281,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.008999999612569809,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10064","display_name":"Complex Network Analysis Techniques","score":0.0038999998942017555,"subfield":{"id":"https://openalex.org/subfields/3109","display_name":"Statistical and Nonlinear Physics"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.6989799737930298},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6305184960365295},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.6287901401519775},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.48902711272239685},{"id":"https://openalex.org/keywords/topological-data-analysis","display_name":"Topological data analysis","score":0.4609544575214386},{"id":"https://openalex.org/keywords/neighbourhood","display_name":"Neighbourhood (mathematics)","score":0.4130935072898865},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.2852022051811218},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2152796983718872},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.14094653725624084},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.11097201704978943},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11018413305282593},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.09589436650276184}],"concepts":[{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.6989799737930298},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6305184960365295},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.6287901401519775},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.48902711272239685},{"id":"https://openalex.org/C2776477805","wikidata":"https://www.wikidata.org/wiki/Q4460773","display_name":"Topological data analysis","level":2,"score":0.4609544575214386},{"id":"https://openalex.org/C161677786","wikidata":"https://www.wikidata.org/wiki/Q2478475","display_name":"Neighbourhood (mathematics)","level":2,"score":0.4130935072898865},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.2852022051811218},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2152796983718872},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.14094653725624084},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.11097201704978943},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11018413305282593},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.09589436650276184},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001249","descriptor_name":"Asthma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001249","descriptor_name":"Asthma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001249","descriptor_name":"Asthma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001943","descriptor_name":"Breast Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-020-03769-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03769-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03769-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:33008305","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/33008305","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:6e6f2688de1a47d796415c2e0a3f1711","is_oa":true,"landing_page_url":"https://doaj.org/article/6e6f2688de1a47d796415c2e0a3f1711","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 21, Iss 1, Pp 1-20 (2020)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7531168","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7531168","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-020-03769-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03769-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03769-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.5799999833106995}],"awards":[{"id":"https://openalex.org/G1903355035","display_name":"\u57fa\u4e8e\u7ec4\u7ec7\u591a\u5c42\u7f51\u7edc\u6a21\u578b\u7684\u836f\u7269\u91cd\u5b9a\u4f4d\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61672406","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3116394099","display_name":null,"funder_award_id":"2015M582620","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G4078483090","display_name":null,"funder_award_id":"JB190306","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G519821748","display_name":"\u590d\u6742\u75be\u75c5\u7684\u7ed3\u6784\u5316\u7ec4\u7ec7\u89c4\u5f8b\u53d1\u73b0\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61772395","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6110802431","display_name":null,"funder_award_id":"61702396","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6640186486","display_name":null,"funder_award_id":"61532014","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6784617664","display_name":null,"funder_award_id":"JB190306","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G7499399211","display_name":null,"funder_award_id":"2015M582620","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G7957669371","display_name":"\u957f\u975e\u7f16\u7801RNA\u4e0e\u590d\u6742\u75be\u75c5\u5173\u8054\u5f02\u5e38\u6a21\u5f0f\u6316\u6398\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61672407","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8639979063","display_name":null,"funder_award_id":"61702397","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8899475930","display_name":null,"funder_award_id":"2018SHZDZX01","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321543","display_name":"China Postdoctoral Science Foundation","ror":"https://ror.org/0426zh255"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3091027434.pdf","grobid_xml":"https://content.openalex.org/works/W3091027434.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W1964716329","https://openalex.org/W1992062845","https://openalex.org/W2038920443","https://openalex.org/W2047031939","https://openalex.org/W2051674484","https://openalex.org/W2053870136","https://openalex.org/W2056782561","https://openalex.org/W2062533676","https://openalex.org/W2067305633","https://openalex.org/W2070009273","https://openalex.org/W2083045667","https://openalex.org/W2083431012","https://openalex.org/W2100761975","https://openalex.org/W2109521384","https://openalex.org/W2110553827","https://openalex.org/W2110684048","https://openalex.org/W2119412782","https://openalex.org/W2120176508","https://openalex.org/W2122237812","https://openalex.org/W2131161884","https://openalex.org/W2137131001","https://openalex.org/W2146512944","https://openalex.org/W2146994504","https://openalex.org/W2153806653","https://openalex.org/W2169589032","https://openalex.org/W2172024938","https://openalex.org/W2180749449","https://openalex.org/W2410122609","https://openalex.org/W2616561032","https://openalex.org/W2626606138","https://openalex.org/W2752291315","https://openalex.org/W2796153225","https://openalex.org/W2808363286","https://openalex.org/W2949557421","https://openalex.org/W2964198126","https://openalex.org/W3104123570","https://openalex.org/W4240710608","https://openalex.org/W4298042201"],"related_works":["https://openalex.org/W2080509092","https://openalex.org/W4225868462","https://openalex.org/W2169777166","https://openalex.org/W3209453710","https://openalex.org/W2132254605","https://openalex.org/W2600275996","https://openalex.org/W2164689880","https://openalex.org/W2979636089","https://openalex.org/W2147369993","https://openalex.org/W2949557421"],"abstract_inverted_index":{"BACKGROUND:":[0],"Precise":[1],"disease":[2,12,24,41,86,111,129,150,184],"module":[3,25,112,130],"is":[4,45,175],"conducive":[5],"to":[6,20,31,59,107,125,144],"understanding":[7,199],"the":[8,21,91,153,156,200],"molecular":[9],"mechanism":[10],"of":[11,23,40,94,119,142,149,155,186,202],"causation":[13],"and":[14,35,81,189,210],"identifying":[15],"drug":[16],"targets.":[17],"However,":[18],"due":[19],"fragmentization":[22],"in":[26,159,179,197,206],"incomplete":[27],"human":[28],"interactome,":[29],"how":[30],"determine":[32],"connectivity":[33,147,154],"pattern":[34,148],"detect":[36,108],"a":[37,65,84,100,109,115,139,181],"complete":[38,85],"neighbourhood":[39,185],"based":[42,89],"on":[43,90],"this":[44,52,146,170],"still":[46],"an":[47,60],"open":[48],"question.":[49],"RESULTS:":[50],"In":[51],"paper,":[53],"we":[54,98,135],"perform":[55],"exploratory":[56],"analysis":[57],"leading":[58],"important":[61],"observation":[62],"that":[63],"through":[64],"few":[66],"intermediate":[67,96,120],"nodes,":[68,97,121],"most":[69],"separate":[70,102],"connected":[71,80,103,183],"components":[72,104],"formed":[73],"by":[74,113],"disease-associated":[75],"proteins":[76],"can":[77],"be":[78],"effectively":[79],"eventually":[82],"form":[83],"module.":[87,151],"And":[88],"topological":[92],"properties":[93],"these":[95],"propose":[99],"connect":[101],"(C3)":[105],"method":[106],"succinct":[110],"introducing":[114],"relatively":[116],"small":[117],"number":[118],"which":[122],"allows":[123],"us":[124],"obtain":[126],"more":[127],"pure":[128],"than":[131],"other":[132],"methods.":[133],"Then":[134],"apply":[136],"C3":[137,173],"across":[138],"large":[140],"corpus":[141],"diseases":[143,188],"validate":[145],"Furthermore,":[152],"perturbed":[157],"genes":[158,205],"multi-omics":[160,192],"data":[161,209],"such":[162],"as":[163],"The":[164],"Cancer":[165],"Genome":[166],"Atlas":[167],"also":[168,195],"fits":[169],"pattern.":[171],"CONCLUSIONS:":[172],"tool":[174],"not":[176],"only":[177],"useful":[178],"detecting":[180],"clearly-defined":[182],"299":[187],"cancer":[190],"with":[191],"data,":[193],"but":[194],"helpful":[196],"better":[198],"interconnection":[201],"phenotypically":[203],"related":[204],"different":[207],"omics":[208],"studying":[211],"complex":[212],"pathological":[213],"processes.":[214]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":6},{"year":2021,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
