{"id":"https://openalex.org/W3087455731","doi":"https://doi.org/10.1186/s12859-020-03645-9","title":"Convolutional architectures for virtual screening","display_name":"Convolutional architectures for virtual screening","publication_year":2020,"publication_date":"2020-09-01","ids":{"openalex":"https://openalex.org/W3087455731","doi":"https://doi.org/10.1186/s12859-020-03645-9","mag":"3087455731","pmid":"https://pubmed.ncbi.nlm.nih.gov/32938359"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-020-03645-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03645-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03645-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03645-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5032486403","display_name":"Isabella Mendolia","orcid":"https://orcid.org/0000-0001-9543-7018"},"institutions":[{"id":"https://openalex.org/I900890020","display_name":"University of Palermo","ror":"https://ror.org/044k9ta02","country_code":"IT","type":"education","lineage":["https://openalex.org/I900890020"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Isabella Mendolia","raw_affiliation_strings":["Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy. isabella.mendolia@unipa.it","Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy. isabella.mendolia@unipa.it","institution_ids":[]},{"raw_affiliation_string":"Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy","institution_ids":["https://openalex.org/I900890020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060079183","display_name":"Salvatore Contino","orcid":"https://orcid.org/0000-0002-7476-1545"},"institutions":[{"id":"https://openalex.org/I900890020","display_name":"University of Palermo","ror":"https://ror.org/044k9ta02","country_code":"IT","type":"education","lineage":["https://openalex.org/I900890020"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Salvatore Contino","raw_affiliation_strings":["Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy","institution_ids":["https://openalex.org/I900890020"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071626517","display_name":"Ugo Perricone","orcid":"https://orcid.org/0000-0002-2181-2468"},"institutions":[{"id":"https://openalex.org/I4210150906","display_name":"Ri.MED","ror":"https://ror.org/05qetrn02","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210150906"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Ugo Perricone","raw_affiliation_strings":["Gruppo Drug Design, Fondazione Ri.MED, 90133, Palermo, Italy. uperricone@fondazionerimed.com","Gruppo Drug Design, Fondazione Ri.MED, 90133, Palermo, Italy"],"affiliations":[{"raw_affiliation_string":"Gruppo Drug Design, Fondazione Ri.MED, 90133, Palermo, Italy. uperricone@fondazionerimed.com","institution_ids":[]},{"raw_affiliation_string":"Gruppo Drug Design, Fondazione Ri.MED, 90133, Palermo, Italy","institution_ids":["https://openalex.org/I4210150906"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048915192","display_name":"Edoardo Ardizzone","orcid":"https://orcid.org/0000-0002-3096-8253"},"institutions":[{"id":"https://openalex.org/I900890020","display_name":"University of Palermo","ror":"https://ror.org/044k9ta02","country_code":"IT","type":"education","lineage":["https://openalex.org/I900890020"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Edoardo Ardizzone","raw_affiliation_strings":["Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy","institution_ids":["https://openalex.org/I900890020"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5029869755","display_name":"Roberto Pirrone","orcid":"https://orcid.org/0000-0001-9453-510X"},"institutions":[{"id":"https://openalex.org/I900890020","display_name":"University of Palermo","ror":"https://ror.org/044k9ta02","country_code":"IT","type":"education","lineage":["https://openalex.org/I900890020"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Roberto Pirrone","raw_affiliation_strings":["Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Ingegneria Universit'a degli Studi di Palermo, Viale delle Scienze, Edificio 6, 90128, Palermo, Italy","institution_ids":["https://openalex.org/I900890020"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5032486403","https://openalex.org/A5071626517"],"corresponding_institution_ids":["https://openalex.org/I4210150906","https://openalex.org/I900890020"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.023,"has_fulltext":true,"cited_by_count":22,"citation_normalized_percentile":{"value":0.89810505,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"21","issue":"S8","first_page":"310","last_page":"310"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9818999767303467,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/virtual-screening","display_name":"Virtual screening","score":0.7715558409690857},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7576956152915955},{"id":"https://openalex.org/keywords/false-positive-paradox","display_name":"False positive paradox","score":0.6560561656951904},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5227673053741455},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.5206336379051208},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.49560844898223877},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.4477241635322571},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.43006694316864014},{"id":"https://openalex.org/keywords/convolutional-neural-network","display_name":"Convolutional neural network","score":0.41775134205818176},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.37908071279525757},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3380786180496216},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.1971207857131958},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.14323356747627258},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.07560646533966064}],"concepts":[{"id":"https://openalex.org/C103697762","wikidata":"https://www.wikidata.org/wiki/Q4112105","display_name":"Virtual screening","level":3,"score":0.7715558409690857},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7576956152915955},{"id":"https://openalex.org/C64869954","wikidata":"https://www.wikidata.org/wiki/Q1859747","display_name":"False positive paradox","level":2,"score":0.6560561656951904},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5227673053741455},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.5206336379051208},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.49560844898223877},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.4477241635322571},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.43006694316864014},{"id":"https://openalex.org/C81363708","wikidata":"https://www.wikidata.org/wiki/Q17084460","display_name":"Convolutional neural network","level":2,"score":0.41775134205818176},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.37908071279525757},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3380786180496216},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.1971207857131958},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.14323356747627258},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.07560646533966064},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-020-03645-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03645-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03645-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:32938359","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/32938359","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:iris.unipa.it:10447/514063","is_oa":true,"landing_page_url":"http://hdl.handle.net/10447/514063","pdf_url":"http://hdl.handle.net/10447/514063","source":{"id":"https://openalex.org/S4306401065","display_name":"Nova Science Publishers (Nova Science Publishers, Inc.)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:a25eae56877b4aeb8acb0a6699be0398","is_oa":true,"landing_page_url":"https://doaj.org/article/a25eae56877b4aeb8acb0a6699be0398","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 21, Iss S8, Pp 1-14 (2020)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:7493874","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/7493874","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-020-03645-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-020-03645-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-020-03645-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5600000023841858,"id":"https://metadata.un.org/sdg/16","display_name":"Peace, Justice and strong institutions"},{"score":0.4300000071525574,"id":"https://metadata.un.org/sdg/10","display_name":"Reduced inequalities"}],"awards":[{"id":"https://openalex.org/G3464696808","display_name":null,"funder_award_id":"G77B17000110001","funder_id":"https://openalex.org/F4320326083","funder_display_name":"Regione Siciliana"},{"id":"https://openalex.org/G7148320766","display_name":null,"funder_award_id":"FSC 2014/2020","funder_id":"https://openalex.org/F4320326083","funder_display_name":"Regione Siciliana"},{"id":"https://openalex.org/G7811779775","display_name":null,"funder_award_id":"CheMISt-CUPG77B17000110001","funder_id":"https://openalex.org/F4320326083","funder_display_name":"Regione Siciliana"}],"funders":[{"id":"https://openalex.org/F4320326083","display_name":"Regione Siciliana","ror":"https://ror.org/025079t78"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W3087455731.pdf","grobid_xml":"https://content.openalex.org/works/W3087455731.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1738019091","https://openalex.org/W1911433256","https://openalex.org/W1979900513","https://openalex.org/W1983478747","https://openalex.org/W1996327711","https://openalex.org/W2005361085","https://openalex.org/W2028217398","https://openalex.org/W2053717624","https://openalex.org/W2079019214","https://openalex.org/W2214665483","https://openalex.org/W2526925775","https://openalex.org/W2556014018","https://openalex.org/W2578240541","https://openalex.org/W2604296437","https://openalex.org/W2775684663","https://openalex.org/W2795068716","https://openalex.org/W2809595040","https://openalex.org/W2906755148","https://openalex.org/W2907597838","https://openalex.org/W3100704554"],"related_works":["https://openalex.org/W1557094818","https://openalex.org/W3180887190","https://openalex.org/W2320211095","https://openalex.org/W2308164565","https://openalex.org/W2062768126","https://openalex.org/W2922499735","https://openalex.org/W2183246718","https://openalex.org/W2099261052","https://openalex.org/W2069870126","https://openalex.org/W2344540030"],"abstract_inverted_index":{"The":[0],"proposed":[1],"architecture":[2],"outperforms":[3],"state-of-the-art":[4],"ML":[5],"approaches,":[6],"and":[7],"some":[8],"interesting":[9],"insights":[10],"on":[11],"molecular":[12],"fingerprints":[13],"are":[14],"devised.":[15]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
