{"id":"https://openalex.org/W2995188884","doi":"https://doi.org/10.1186/s12859-019-3249-8","title":"Association between ALS and retroviruses: evidence from bioinformatics analysis","display_name":"Association between ALS and retroviruses: evidence from bioinformatics analysis","publication_year":2019,"publication_date":"2019-12-01","ids":{"openalex":"https://openalex.org/W2995188884","doi":"https://doi.org/10.1186/s12859-019-3249-8","mag":"2995188884","pmid":"https://pubmed.ncbi.nlm.nih.gov/31861978"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-019-3249-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-3249-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3249-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3249-8","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018092203","display_name":"Jon P. Klein","orcid":"https://orcid.org/0000-0002-1903-1478"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Jon P. Klein","raw_affiliation_strings":["Department of Neurology, Mayo Clinic, 200 First St. SW, Rochester, MN, 55905, USA"],"affiliations":[{"raw_affiliation_string":"Department of Neurology, Mayo Clinic, 200 First St. SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067865294","display_name":"Zhifu Sun","orcid":"https://orcid.org/0000-0001-8461-7523"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Zhifu Sun","raw_affiliation_strings":["Department of Health Science Research, Division of Biomedical Statistics and Informatics, Mayo Clinic, 200 First St. SW, Rochester, MN, 55905, USA"],"affiliations":[{"raw_affiliation_string":"Department of Health Science Research, Division of Biomedical Statistics and Informatics, Mayo Clinic, 200 First St. SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I1330342723"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084777911","display_name":"Nathan P. Staff","orcid":"https://orcid.org/0000-0001-6760-3859"},"institutions":[{"id":"https://openalex.org/I1330342723","display_name":"Mayo Clinic","ror":"https://ror.org/02qp3tb03","country_code":"US","type":"funder","lineage":["https://openalex.org/I1330342723"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nathan P. Staff","raw_affiliation_strings":["Department of Neurology, Mayo Clinic, 200 First St. SW, Rochester, MN, 55905, USA. staff.nathan@mayo.edu","Department of Neurology, Mayo Clinic, 200 First St. SW, Rochester, MN, 55905, USA"],"affiliations":[{"raw_affiliation_string":"Department of Neurology, Mayo Clinic, 200 First St. SW, Rochester, MN, 55905, USA. staff.nathan@mayo.edu","institution_ids":[]},{"raw_affiliation_string":"Department of Neurology, Mayo Clinic, 200 First St. SW, Rochester, MN, 55905, USA","institution_ids":["https://openalex.org/I1330342723"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5018092203"],"corresponding_institution_ids":["https://openalex.org/I1330342723"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.7215,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.84525071,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"20","issue":"S24","first_page":"680","last_page":"680"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10855","display_name":"Amyotrophic Lateral Sclerosis Research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2728","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10855","display_name":"Amyotrophic Lateral Sclerosis Research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/2728","display_name":"Neurology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12915","display_name":"Biochemical Acid Research Studies","score":0.9797000288963318,"subfield":{"id":"https://openalex.org/subfields/1303","display_name":"Biochemistry"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10949","display_name":"Genetic Neurodegenerative Diseases","score":0.9161999821662903,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.47385838627815247},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4666103720664978},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4344610571861267},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.43010038137435913},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.4206749200820923},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.36657625436782837},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10298079252243042},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.08242496848106384}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.47385838627815247},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4666103720664978},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4344610571861267},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.43010038137435913},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.4206749200820923},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.36657625436782837},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10298079252243042},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.08242496848106384},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.0},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000690","descriptor_name":"Amyotrophic Lateral Sclerosis","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000690","descriptor_name":"Amyotrophic Lateral Sclerosis","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D000690","descriptor_name":"Amyotrophic Lateral Sclerosis","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008137","descriptor_name":"Longitudinal Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008137","descriptor_name":"Longitudinal Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008137","descriptor_name":"Longitudinal Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012190","descriptor_name":"Retroviridae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012190","descriptor_name":"Retroviridae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012190","descriptor_name":"Retroviridae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-019-3249-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-3249-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3249-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31861978","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31861978","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:ebd1934fc9834ddb886cb5960cdf1a9b","is_oa":true,"landing_page_url":"https://doaj.org/article/ebd1934fc9834ddb886cb5960cdf1a9b","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 20, Iss S24, Pp 1-8 (2019)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6923964","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6923964","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-019-3249-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-3249-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3249-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.75,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320309464","display_name":"Mayo Foundation for Medical Education and Research","ror":"https://ror.org/02qp3tb03"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2995188884.pdf","grobid_xml":"https://content.openalex.org/works/W2995188884.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W314830874","https://openalex.org/W1509233575","https://openalex.org/W1930450098","https://openalex.org/W1980205755","https://openalex.org/W1986611577","https://openalex.org/W1992843642","https://openalex.org/W1996024251","https://openalex.org/W2008949845","https://openalex.org/W2012662246","https://openalex.org/W2022235747","https://openalex.org/W2034254855","https://openalex.org/W2039042963","https://openalex.org/W2047671727","https://openalex.org/W2049756837","https://openalex.org/W2066828509","https://openalex.org/W2069781018","https://openalex.org/W2076376940","https://openalex.org/W2085662515","https://openalex.org/W2096173332","https://openalex.org/W2110632763","https://openalex.org/W2115818030","https://openalex.org/W2116710635","https://openalex.org/W2119950848","https://openalex.org/W2130638985","https://openalex.org/W2136850043","https://openalex.org/W2151871684","https://openalex.org/W2159675211","https://openalex.org/W2161355626","https://openalex.org/W2169589032","https://openalex.org/W2236767140","https://openalex.org/W2312354603","https://openalex.org/W2477863367","https://openalex.org/W2523572491","https://openalex.org/W2769770300","https://openalex.org/W2782888173","https://openalex.org/W2794926869","https://openalex.org/W2883160990","https://openalex.org/W3150918956","https://openalex.org/W4210735407","https://openalex.org/W6640223757"],"related_works":["https://openalex.org/W4391375266","https://openalex.org/W2352440174","https://openalex.org/W4309440960","https://openalex.org/W2062168445","https://openalex.org/W2348940229","https://openalex.org/W2363046693","https://openalex.org/W2389491697","https://openalex.org/W4301044699","https://openalex.org/W2067476155","https://openalex.org/W2728345702"],"abstract_inverted_index":{"Bioinformatics":[0],"analysis":[1,26],"provides":[2],"evidence":[3],"to":[4],"support":[5],"pathological":[6],"links":[7],"between":[8],"ALS":[9],"and":[10,15,24,42],"retroviral":[11,40],"activation.":[12],"The":[13,22],"neuroinflammation":[14],"apoptotic":[16],"regulation":[17],"pathways":[18],"are":[19],"specifically":[20],"implicated.":[21],"continuation":[23],"further":[25],"of":[27],"large":[28],"scale":[29],"genome":[30],"studies":[31],"may":[32,45],"prove":[33],"useful":[34],"in":[35,39],"exploring":[36],"genes":[37],"important":[38],"activation":[41],"ALS,":[43],"which":[44],"help":[46],"discover":[47],"new":[48],"drug":[49],"targets.":[50]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
