{"id":"https://openalex.org/W2990251597","doi":"https://doi.org/10.1186/s12859-019-3127-4","title":"Prioritizing candidate diseases-related metabolites based on literature and functional similarity","display_name":"Prioritizing candidate diseases-related metabolites based on literature and functional similarity","publication_year":2019,"publication_date":"2019-11-01","ids":{"openalex":"https://openalex.org/W2990251597","doi":"https://doi.org/10.1186/s12859-019-3127-4","mag":"2990251597","pmid":"https://pubmed.ncbi.nlm.nih.gov/31760947"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-019-3127-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-3127-4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3127-4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3127-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101577163","display_name":"Yongtian Wang","orcid":"https://orcid.org/0000-0003-2766-3106"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yongtian Wang","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. ydwang@hit.edu.cn","School of Computer Science and Technology, Harbin Institute of Technology, Harbin, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. ydwang@hit.edu.cn","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056364272","display_name":"Liran Juan","orcid":"https://orcid.org/0000-0001-8826-0269"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yongtian Wang","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. ydwang@hit.edu.cn","School of Life Science and Technology, Harbin Institute of Technology, Harbin, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. ydwang@hit.edu.cn","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"School of Life Science and Technology, Harbin Institute of Technology, Harbin, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056364272","display_name":"Liran Juan","orcid":"https://orcid.org/0000-0001-8826-0269"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Liran Juan","raw_affiliation_strings":["School of Life Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","School of Computer Science, Northwestern Polytechnical University, Xi\u2019an, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi\u2019an, People\u2019s Republic of China","institution_ids":["https://openalex.org/I17145004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084159324","display_name":"Tianyi Zang","orcid":"https://orcid.org/0000-0003-0195-8731"},"institutions":[{"id":"https://openalex.org/I17145004","display_name":"Northwestern Polytechnical University","ror":"https://ror.org/01y0j0j86","country_code":"CN","type":"education","lineage":["https://openalex.org/I17145004"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiajie Peng","raw_affiliation_strings":["School of Computer Science, Northwestern Polytechnical University, Xi'an, People's Republic of China","School of Computer Science and Technology, Harbin Institute of Technology, Harbin, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Northwestern Polytechnical University, Xi'an, People's Republic of China","institution_ids":["https://openalex.org/I17145004"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100392447","display_name":"Yadong Wang","orcid":"https://orcid.org/0000-0001-6500-6217"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Tianyi Zang","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. tianyi.zang@hit.edu.cn","School of Computer Science and Technology, Harbin Institute of Technology, Harbin, People\u2019s Republic of China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. tianyi.zang@hit.edu.cn","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, People\u2019s Republic of China","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100392447","display_name":"Yadong Wang","orcid":"https://orcid.org/0000-0001-6500-6217"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yadong Wang","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. ydwang@hit.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. ydwang@hit.edu.cn","institution_ids":["https://openalex.org/I204983213"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100392447","display_name":"Yadong Wang","orcid":"https://orcid.org/0000-0001-6500-6217"},"institutions":[{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yadong Wang","raw_affiliation_strings":["School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. ydwang@hit.edu.cn"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China","institution_ids":["https://openalex.org/I204983213"]},{"raw_affiliation_string":"School of Computer Science and Technology, Harbin Institute of Technology, Harbin, 150001, People's Republic of China. ydwang@hit.edu.cn","institution_ids":["https://openalex.org/I204983213"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5100392447","https://openalex.org/A5101577163"],"corresponding_institution_ids":["https://openalex.org/I204983213"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.531,"has_fulltext":true,"cited_by_count":11,"citation_normalized_percentile":{"value":0.63654638,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"20","issue":"S18","first_page":"574","last_page":"574"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.816100001335144,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.816100001335144,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.09860000014305115,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.012400000356137753,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6824918985366821},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5954525470733643},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5266696810722351},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.40695542097091675},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.40557241439819336},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3489070534706116},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.28364360332489014},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.15899768471717834},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.13217967748641968},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.11958032846450806}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6824918985366821},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5954525470733643},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5266696810722351},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40695542097091675},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.40557241439819336},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3489070534706116},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28364360332489014},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.15899768471717834},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.13217967748641968},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.11958032846450806},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012372","descriptor_name":"ROC Curve","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-019-3127-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-3127-4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3127-4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31760947","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31760947","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:6a9ab27aa16a46d7bbe4de1923a9e0b5","is_oa":true,"landing_page_url":"https://doaj.org/article/6a9ab27aa16a46d7bbe4de1923a9e0b5","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 20, Iss S18, Pp 1-11 (2019)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6876110","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6876110","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-019-3127-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-3127-4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3127-4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"display_name":"Partnerships for the goals","id":"https://metadata.un.org/sdg/17"}],"awards":[{"id":"https://openalex.org/G1165225680","display_name":null,"funder_award_id":"61571152","funder_id":"https://openalex.org/F4320335773","funder_display_name":"National High-tech Research and Development Program"},{"id":"https://openalex.org/G3092211254","display_name":null,"funder_award_id":"2015AA020108","funder_id":"https://openalex.org/F4320335773","funder_display_name":"National High-tech Research and Development Program"},{"id":"https://openalex.org/G3094467136","display_name":null,"funder_award_id":"2012AA02A601","funder_id":"https://openalex.org/F4320335773","funder_display_name":"National High-tech Research and Development Program"},{"id":"https://openalex.org/G3598598921","display_name":null,"funder_award_id":"2012AA02A601","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3901643197","display_name":null,"funder_award_id":"31601072","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4002265710","display_name":"\u764c\u75c7\u76f8\u5173\u7684\u589e\u5f3a\u5b50lncRNA\u8bc6\u522b\u53ca\u5206\u6790\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61571152","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4243412236","display_name":null,"funder_award_id":"863 Program","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5300874671","display_name":null,"funder_award_id":"2015AA020101","funder_id":"https://openalex.org/F4320335773","funder_display_name":"National High-tech Research and Development Program"},{"id":"https://openalex.org/G7869910188","display_name":null,"funder_award_id":"2015AA020101","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8710076561","display_name":null,"funder_award_id":"2015AA020108","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335773","display_name":"National High-tech Research and Development Program","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2990251597.pdf","grobid_xml":"https://content.openalex.org/works/W2990251597.grobid-xml"},"referenced_works_count":51,"referenced_works":["https://openalex.org/W90362830","https://openalex.org/W146511194","https://openalex.org/W1486317198","https://openalex.org/W1538574688","https://openalex.org/W1965475219","https://openalex.org/W1971040550","https://openalex.org/W2002928619","https://openalex.org/W2007897985","https://openalex.org/W2010707723","https://openalex.org/W2012696260","https://openalex.org/W2025294701","https://openalex.org/W2027455260","https://openalex.org/W2041255286","https://openalex.org/W2062090250","https://openalex.org/W2095011547","https://openalex.org/W2124045889","https://openalex.org/W2125118217","https://openalex.org/W2133299088","https://openalex.org/W2139939149","https://openalex.org/W2140030351","https://openalex.org/W2154431984","https://openalex.org/W2158743996","https://openalex.org/W2165106082","https://openalex.org/W2165674132","https://openalex.org/W2165944862","https://openalex.org/W2171631429","https://openalex.org/W2179544415","https://openalex.org/W2190251428","https://openalex.org/W2294516783","https://openalex.org/W2341985741","https://openalex.org/W2594247694","https://openalex.org/W2609210159","https://openalex.org/W2759279048","https://openalex.org/W2767683865","https://openalex.org/W2769571805","https://openalex.org/W2773644739","https://openalex.org/W2776531206","https://openalex.org/W2792440843","https://openalex.org/W2792533056","https://openalex.org/W2796725206","https://openalex.org/W2810316347","https://openalex.org/W2885716250","https://openalex.org/W2915806464","https://openalex.org/W2921754629","https://openalex.org/W2953208595","https://openalex.org/W2977393556","https://openalex.org/W4211085285","https://openalex.org/W4233182706","https://openalex.org/W4294326454","https://openalex.org/W6674365917","https://openalex.org/W6679726148"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W1971568933","https://openalex.org/W2013243191","https://openalex.org/W2117258802"],"abstract_inverted_index":{"BACKGROUND:":[0],"As":[1,239,256],"the":[2,24,48,94,100,113,133,146,192,223,229,242,247],"terminal":[3],"products":[4],"of":[5,31,43,56,59,81,102,109,135,142,149,169,222,231,252,280],"cellular":[6],"regulatory":[7],"process,":[8],"functional":[9,77,165,316],"related":[10,33,186,303],"metabolites":[11,34,74,90,103,128,185,205,302],"have":[12],"a":[13,36,53,67,118,157,240,257,286],"close":[14],"relationship":[15],"with":[16,23,125,176,201,275],"complex":[17],"diseases,":[18,203,237],"and":[19,79,91,151,155,167,196,206,215,227,233,295,315],"are":[20],"often":[21],"associated":[22,326],"same":[25],"or":[26],"similar":[27],"diseases.":[28,116,188],"Therefore,":[29],"identification":[30],"disease":[32,325],"play":[35],"critical":[37],"role":[38],"in":[39,179,267,299],"understanding":[40],"comprehensively":[41],"pathogenesis":[42],"disease,":[44],"aiming":[45],"at":[46],"improving":[47],"clinical":[49],"medicine.":[50],"Considering":[51],"that":[52,312],"large":[54],"number":[55],"metabolic":[57,270],"markers":[58],"diseases":[60,92,274,305],"need":[61],"to":[62,70,182,187,264,304,323],"be":[63,265,319],"explored,":[64],"we":[65,98,139,172,211],"propose":[66],"computational":[68,287],"model":[69,288],"identify":[71],"potential":[72,269,301],"disease-related":[73,137],"based":[75,104],"on":[76,105,235],"relationships":[78],"scores":[80,141,168],"referred":[82],"literatures":[83],"between":[84,89,115,127],"metabolites.":[85,333],"First,":[86],"obtaining":[87],"associations":[88,166,317],"from":[93,145,218],"Human":[95,224],"Metabolome":[96,225],"database,":[97],"calculate":[99],"similarities":[101,114,126],"modified":[106],"recommendation":[107],"strategy":[108],"collaborative":[110],"filtering":[111],"utilizing":[112],"Next,":[117],"disease-associated":[119,159,193],"metabolite":[120,160,194,327],"network":[121,161,181,195,199,328],"(DMN)":[122],"is":[123,254,262,289],"built":[124],"as":[129],"weight.":[130],"To":[131],"improve":[132],"ability":[134],"identifying":[136],"metabolites,":[138],"introduce":[140],"text":[143],"mining":[144],"existing":[147],"database":[148,226],"chemicals":[150],"proteins":[152],"into":[153],"DMN":[154,232,253],"build":[156],"new":[158],"(FLDMN)":[162,200],"by":[163],"fusing":[164],"literatures.":[170],"Finally,":[171],"utilize":[173],"random":[174],"walking":[175],"restart":[177],"(RWR)":[178],"this":[180,284],"predict":[183],"candidate":[184,331],"RESULTS:":[189],"We":[190],"construct":[191,324],"its":[197],"improved":[198,259],"245":[202],"587":[204],"28,715":[207],"disease-metabolite":[208],"associations.":[209],"Subsequently,":[210],"extract":[212],"training":[213],"sets":[214,217],"testing":[216],"two":[219],"different":[220],"versions":[221],"assess":[228],"performance":[230,298],"FLDMN":[234,261],"19":[236,273],"respectively.":[238],"result,":[241],"average":[243,277],"AUC":[244,278],"(area":[245],"under":[246],"receiver":[248],"operating":[249],"characteristic":[250],"curve)":[251],"64.35%.":[255],"further":[258],"network,":[260],"proven":[263],"successful":[266],"predicting":[268,300],"signatures":[271],"for":[272,291,329],"an":[276,320],"value":[279],"76.03%.":[281],"CONCLUSION:":[282],"In":[283],"paper,":[285],"proposed":[290],"exploring":[292],"metabolite-disease":[293],"pairs":[294],"has":[296],"good":[297],"through":[306],"adequate":[307],"validation.":[308],"This":[309],"result":[310],"suggests":[311],"integrating":[313],"literature":[314],"can":[318],"effective":[321],"way":[322],"prioritizing":[330],"diseases-related":[332]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":2}],"updated_date":"2026-07-19T05:54:51.957546","created_date":"2025-10-10T00:00:00"}
