{"id":"https://openalex.org/W2972551688","doi":"https://doi.org/10.1186/s12859-019-3063-3","title":"A network embedding-based multiple information integration method for the MiRNA-disease association prediction","display_name":"A network embedding-based multiple information integration method for the MiRNA-disease association prediction","publication_year":2019,"publication_date":"2019-09-12","ids":{"openalex":"https://openalex.org/W2972551688","doi":"https://doi.org/10.1186/s12859-019-3063-3","mag":"2972551688","pmid":"https://pubmed.ncbi.nlm.nih.gov/31510919"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-019-3063-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-3063-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3063-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3063-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073609436","display_name":"Yuchong Gong","orcid":null},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuchong Gong","raw_affiliation_strings":["School of Computer Science, Wuhan University, Wuhan, 430072, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Wuhan University, Wuhan, 430072, China","institution_ids":["https://openalex.org/I37461747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101495573","display_name":"Yanqing Niu","orcid":"https://orcid.org/0000-0001-7267-9305"},"institutions":[{"id":"https://openalex.org/I174442536","display_name":"South Central Minzu University","ror":"https://ror.org/03d7sax13","country_code":"CN","type":"education","lineage":["https://openalex.org/I174442536"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yanqing Niu","raw_affiliation_strings":["School of Mathematics and Statistics, South-Central University for Nationalities, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics and Statistics, South-Central University for Nationalities, Wuhan, 430074, China","institution_ids":["https://openalex.org/I174442536"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100448121","display_name":"Wen Zhang","orcid":"https://orcid.org/0000-0001-5221-2628"},"institutions":[{"id":"https://openalex.org/I204823248","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294","country_code":"CN","type":"education","lineage":["https://openalex.org/I204823248"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wen Zhang","raw_affiliation_strings":["College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China. zhangwen@mail.hzau.edu.cn","College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China. zhangwen@mail.hzau.edu.cn","institution_ids":["https://openalex.org/I204823248"]},{"raw_affiliation_string":"College of Informatics, Huazhong Agricultural University, Wuhan, 430070, China","institution_ids":["https://openalex.org/I204823248"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100606157","display_name":"Xiaohong Li","orcid":null},"institutions":[{"id":"https://openalex.org/I37461747","display_name":"Wuhan University","ror":"https://ror.org/033vjfk17","country_code":"CN","type":"education","lineage":["https://openalex.org/I37461747"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaohong Li","raw_affiliation_strings":["School of Computer Science, Wuhan University, Wuhan, 430072, China. leexh@whu.edu.cn","School of Computer Science, Wuhan University, Wuhan, 430072, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Computer Science, Wuhan University, Wuhan, 430072, China. leexh@whu.edu.cn","institution_ids":["https://openalex.org/I37461747"]},{"raw_affiliation_string":"School of Computer Science, Wuhan University, Wuhan, 430072, China","institution_ids":["https://openalex.org/I37461747"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100448121"],"corresponding_institution_ids":["https://openalex.org/I204823248"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":4.871,"has_fulltext":true,"cited_by_count":77,"citation_normalized_percentile":{"value":0.96779596,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"20","issue":"1","first_page":"468","last_page":"468"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9340000152587891,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9340000152587891,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.004399999976158142,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13426","display_name":"Kruppel-like factors research","score":0.003800000064074993,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/embedding","display_name":"Embedding","score":0.6191020607948303},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5983027815818787},{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.5796295404434204},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.5542621612548828},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.5369099974632263},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.48101574182510376},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.48100218176841736},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.47552040219306946},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.4130405783653259},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.40120428800582886},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3681824803352356},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3528493642807007},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.34088942408561707},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2149951457977295},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.16005796194076538},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09471088647842407},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.07631143927574158}],"concepts":[{"id":"https://openalex.org/C41608201","wikidata":"https://www.wikidata.org/wiki/Q980509","display_name":"Embedding","level":2,"score":0.6191020607948303},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5983027815818787},{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.5796295404434204},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.5542621612548828},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.5369099974632263},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.48101574182510376},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.48100218176841736},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.47552040219306946},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.4130405783653259},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.40120428800582886},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3681824803352356},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3528493642807007},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.34088942408561707},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2149951457977295},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.16005796194076538},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09471088647842407},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.07631143927574158},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012307","descriptor_name":"Risk Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012307","descriptor_name":"Risk Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012307","descriptor_name":"Risk Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012307","descriptor_name":"Risk Factors","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-019-3063-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-3063-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3063-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31510919","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31510919","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:b9d8307529b643cbbbf3e1a22b370303","is_oa":true,"landing_page_url":"https://doaj.org/article/b9d8307529b643cbbbf3e1a22b370303","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 20, Iss 1, Pp 1-13 (2019)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6740005","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6740005","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-019-3063-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-3063-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-3063-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.41999998688697815,"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G1235053802","display_name":null,"funder_award_id":"2042018kf0249","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G4356451055","display_name":null,"funder_award_id":"61772381, 61572368","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5693357935","display_name":"\u57fa\u4e8e\u836f\u7269\u5927\u6570\u636e\u7684\u6f5c\u5728\u4e0d\u826f\u836f\u7269\u53cd\u5e94\u6316\u6398\u7814\u7a76","funder_award_id":"61772381","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G793318600","display_name":"\u591a\u6e90\u57fa\u56e0\u8868\u8fbe\u5927\u6570\u636e\u6574\u5408\u53ca\u4e09\u7ef4\u52a8\u6001\u6a21\u5f0f\u8bc6\u522b\u7684\u5173\u952e\u6280\u672f\u7814\u7a76","funder_award_id":"61572368","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8323965822","display_name":null,"funder_award_id":"2042017kf0219","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"},{"id":"https://openalex.org/G8777676422","display_name":null,"funder_award_id":"2018YFC0407904","funder_id":"https://openalex.org/F4320335777","funder_display_name":"National Key Research and Development Program of China"},{"id":"https://openalex.org/G8965235719","display_name":null,"funder_award_id":"2042017kf0219","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320324775","display_name":"Huazhong Agricultural University","ror":"https://ror.org/023b72294"},{"id":"https://openalex.org/F4320335777","display_name":"National Key Research and Development Program of China","ror":null},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2972551688.pdf","grobid_xml":"https://content.openalex.org/works/W2972551688.grobid-xml"},"referenced_works_count":59,"referenced_works":["https://openalex.org/W1667789979","https://openalex.org/W2017426710","https://openalex.org/W2047967134","https://openalex.org/W2083069604","https://openalex.org/W2083115283","https://openalex.org/W2089001345","https://openalex.org/W2090335107","https://openalex.org/W2097308346","https://openalex.org/W2098318517","https://openalex.org/W2103151642","https://openalex.org/W2122211092","https://openalex.org/W2128768066","https://openalex.org/W2134245005","https://openalex.org/W2135836598","https://openalex.org/W2138325942","https://openalex.org/W2146292498","https://openalex.org/W2154851992","https://openalex.org/W2158135353","https://openalex.org/W2166488637","https://openalex.org/W2171232191","https://openalex.org/W2231136593","https://openalex.org/W2259305122","https://openalex.org/W2289350117","https://openalex.org/W2294932744","https://openalex.org/W2299038317","https://openalex.org/W2313599265","https://openalex.org/W2344103844","https://openalex.org/W2387462954","https://openalex.org/W2393319904","https://openalex.org/W2498615797","https://openalex.org/W2533379596","https://openalex.org/W2559350119","https://openalex.org/W2601934706","https://openalex.org/W2607159126","https://openalex.org/W2607497028","https://openalex.org/W2612872092","https://openalex.org/W2750900465","https://openalex.org/W2757108520","https://openalex.org/W2767178841","https://openalex.org/W2783465657","https://openalex.org/W2789789321","https://openalex.org/W2793459592","https://openalex.org/W2799307902","https://openalex.org/W2805643613","https://openalex.org/W2809156537","https://openalex.org/W2809363952","https://openalex.org/W2889405680","https://openalex.org/W2889626364","https://openalex.org/W2900758217","https://openalex.org/W2904828342","https://openalex.org/W2905566661","https://openalex.org/W2911964244","https://openalex.org/W2946438679","https://openalex.org/W2948996631","https://openalex.org/W2962756421","https://openalex.org/W3025349570","https://openalex.org/W3104097132","https://openalex.org/W4321429270","https://openalex.org/W6602452458"],"related_works":["https://openalex.org/W2081900870","https://openalex.org/W2737319532","https://openalex.org/W3151405604","https://openalex.org/W2565797512","https://openalex.org/W2380654781","https://openalex.org/W2114797768","https://openalex.org/W2176214140","https://openalex.org/W2516873349","https://openalex.org/W1990601549","https://openalex.org/W2379232404"],"abstract_inverted_index":{"BACKGROUND:":[0],"MiRNAs":[1],"play":[2],"significant":[3],"roles":[4],"in":[5,102],"many":[6],"fundamental":[7],"and":[8,12,43,85,112,121,125,156,163,190,204],"important":[9],"biological":[10,117],"processes,":[11],"predicting":[13,217],"potential":[14,180,223],"miRNA-disease":[15,45,50,72,77,131,142,187,218,229],"associations":[16,51,78,124],"makes":[17],"contributions":[18],"to":[19,97,129,224],"understanding":[20],"the":[21,48,71,86,103,107,134,141,146,178,186,226],"molecular":[22],"mechanism":[23],"of":[24,32,100,110,167,181,228],"human":[25],"diseases.":[26],"Existing":[27],"state-of-the-art":[28,159],"methods":[29],"make":[30],"use":[31],"miRNA-target":[33],"associations,":[34,36,46,219],"miRNA-family":[35],"miRNA":[37],"functional":[38],"similarity,":[39],"disease":[40,126],"semantic":[41,127],"similarity":[42],"known":[44,49,76],"but":[47],"are":[52,79,114,137],"not":[53],"well":[54],"exploited.":[55],"RESULTS:":[56],"In":[57,149],"this":[58],"paper,":[59],"a":[60,82,211],"network":[61,87,182,195],"embedding-based":[62],"multiple":[63],"information":[64],"integration":[65],"method":[66,89,184],"(NEMII)":[67],"is":[68,95,169],"proposed":[69],"for":[70,185,216],"association":[73,188,230],"prediction.":[74,231],"First,":[75],"formulated":[80],"as":[81],"bipartite":[83,104],"network,":[84],"embedding":[88,108,183,196],"Structural":[90],"Deep":[91],"Network":[92],"Embedding":[93,202],"(SDNE)":[94],"adopted":[96],"learn":[98],"embeddings":[99],"nodes":[101],"network.":[105],"Second,":[106],"representations":[109],"miRNAs":[111,120],"diseases":[113,122],"combined":[115],"with":[116],"features":[118],"about":[119],"(miRNA-family":[123],"similarities)":[128],"represent":[130],"pairs.":[132],"Third,":[133],"prediction":[135],"models":[136],"constructed":[138],"based":[139],"on":[140],"pairs":[143],"by":[144,172],"using":[145],"random":[147],"forest.":[148],"computational":[150],"experiments,":[151],"NEMII":[152,168],"achieves":[153],"high-accuracy":[154],"performances":[155],"outperforms":[157,192],"other":[158,193],"methods:":[160,197],"GRNMF,":[161],"NTSMDA":[162],"PBMDA.":[164],"The":[165,175],"usefulness":[166],"further":[170],"validated":[171],"case":[173],"studies.":[174],"studies":[176],"demonstrate":[177],"great":[179,222],"prediction,":[189],"SDNE":[191],"popular":[194],"DeepWalk,":[198],"High-Order":[199],"Proximity":[200],"preserved":[201],"(HOPE)":[203],"Laplacian":[205],"Eigenmaps":[206],"(LE).":[207],"CONCLUSION:":[208],"We":[209],"propose":[210],"new":[212],"method,":[213],"named":[214],"NEMII,":[215],"which":[220],"has":[221],"benefit":[225],"field":[227]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":7},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":15},{"year":2021,"cited_by_count":25},{"year":2020,"cited_by_count":21},{"year":2019,"cited_by_count":2}],"updated_date":"2026-06-06T09:05:17.133730","created_date":"2025-10-10T00:00:00"}
