{"id":"https://openalex.org/W2955016363","doi":"https://doi.org/10.1186/s12859-019-2964-5","title":"Odyssey: a semi-automated pipeline for phasing, imputation, and analysis of genome-wide genetic data","display_name":"Odyssey: a semi-automated pipeline for phasing, imputation, and analysis of genome-wide genetic data","publication_year":2019,"publication_date":"2019-06-28","ids":{"openalex":"https://openalex.org/W2955016363","doi":"https://doi.org/10.1186/s12859-019-2964-5","mag":"2955016363","pmid":"https://pubmed.ncbi.nlm.nih.gov/31253090"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-019-2964-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-2964-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-2964-5.pdf","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-2964-5.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5041524260","display_name":"Ryan J. Eller","orcid":"https://orcid.org/0000-0002-5632-2792"},"institutions":[{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Ryan J. Eller","raw_affiliation_strings":["Department of Biology, Indiana University-Purdue University Indianapolis, 723 W. Michigan Street, Indianapolis, IN, USA. ryeller@iupui.edu","Department of Biology, Indiana University-Purdue University Indianapolis, 723 W. Michigan Street, Indianapolis, IN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Indiana University-Purdue University Indianapolis, 723 W. Michigan Street, Indianapolis, IN, USA. ryeller@iupui.edu","institution_ids":["https://openalex.org/I55769427"]},{"raw_affiliation_string":"Department of Biology, Indiana University-Purdue University Indianapolis, 723 W. Michigan Street, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066167699","display_name":"Sarath Chandra Janga","orcid":"https://orcid.org/0000-0001-7351-6268"},"institutions":[{"id":"https://openalex.org/I4394709130","display_name":"Indiana University School of Medicine","ror":"https://ror.org/02ets8c94","country_code":null,"type":"education","lineage":["https://openalex.org/I4394709130","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Sarath C. Janga","raw_affiliation_strings":["Center for Computational Biology and Bioinformatics, Indiana University School of Medicine, 5021 Health Information and Translational Sciences (HITS), 410 West 10th Street, Indianapolis, IN, USA","Department of Biohealth Informatics, School of Informatics and Computing, Indiana University-Purdue University, Indianapolis, IN, USA"],"affiliations":[{"raw_affiliation_string":"Center for Computational Biology and Bioinformatics, Indiana University School of Medicine, 5021 Health Information and Translational Sciences (HITS), 410 West 10th Street, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I55769427","https://openalex.org/I4394709130"]},{"raw_affiliation_string":"Department of Biohealth Informatics, School of Informatics and Computing, Indiana University-Purdue University, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I55769427"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088022576","display_name":"Susan Walsh","orcid":"https://orcid.org/0000-0002-7064-1589"},"institutions":[{"id":"https://openalex.org/I135191193","display_name":"University of Indianapolis","ror":"https://ror.org/052133d12","country_code":"US","type":"education","lineage":["https://openalex.org/I135191193"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan Walsh","raw_affiliation_strings":["Department of Biology, Indiana University-Purdue University Indianapolis, 723 W. Michigan Street, Indianapolis, IN, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biology, Indiana University-Purdue University Indianapolis, 723 W. Michigan Street, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5041524260"],"corresponding_institution_ids":["https://openalex.org/I135191193","https://openalex.org/I55769427"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.614,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.84671408,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"20","issue":"1","first_page":"364","last_page":"364"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7070208191871643},{"id":"https://openalex.org/keywords/imputation","display_name":"Imputation (statistics)","score":0.6872441172599792},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.5959309935569763},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.581985592842102},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.538941502571106},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.5228583812713623},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.4867968261241913},{"id":"https://openalex.org/keywords/data-visualization","display_name":"Data visualization","score":0.4601256549358368},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.4270891547203064},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3165830075740814},{"id":"https://openalex.org/keywords/missing-data","display_name":"Missing data","score":0.1737540066242218},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.15559935569763184},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1237516701221466},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.11047574877738953}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7070208191871643},{"id":"https://openalex.org/C58041806","wikidata":"https://www.wikidata.org/wiki/Q1660484","display_name":"Imputation (statistics)","level":3,"score":0.6872441172599792},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.5959309935569763},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.581985592842102},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.538941502571106},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.5228583812713623},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.4867968261241913},{"id":"https://openalex.org/C172367668","wikidata":"https://www.wikidata.org/wiki/Q6504956","display_name":"Data visualization","level":3,"score":0.4601256549358368},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.4270891547203064},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3165830075740814},{"id":"https://openalex.org/C9357733","wikidata":"https://www.wikidata.org/wiki/Q6878417","display_name":"Missing data","level":2,"score":0.1737540066242218},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.15559935569763184},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1237516701221466},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.11047574877738953},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055106","descriptor_name":"Genome-Wide Association Study","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1186/s12859-019-2964-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-2964-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-2964-5.pdf","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31253090","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31253090","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:397c25b060b34c6399ff22603b453b48","is_oa":true,"landing_page_url":"https://doaj.org/article/397c25b060b34c6399ff22603b453b48","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 20, Iss 1, Pp 1-8 (2019)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6599316","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6599316","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:scholarworks.indianapolis.iu.edu:1805/20851","is_oa":false,"landing_page_url":"https://hdl.handle.net/1805/20851","pdf_url":null,"source":{"id":"https://openalex.org/S4306400987","display_name":"IUScholarWorks (Indiana University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I592451","host_organization_name":"Indiana University","host_organization_lineage":["https://openalex.org/I592451"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PMC","raw_type":"Article"},{"id":"pmh:oai:scholarworks.iupui.edu:1805/20851","is_oa":true,"landing_page_url":"http://hdl.handle.net/1805/20851","pdf_url":null,"source":{"id":"https://openalex.org/S4306400987","display_name":"IUScholarWorks (Indiana University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I592451","host_organization_name":"Indiana University","host_organization_lineage":["https://openalex.org/I592451"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"PMC","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1186/s12859-019-2964-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-2964-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-019-2964-5.pdf","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/9","score":0.5400000214576721,"display_name":"Industry, innovation and infrastructure"}],"awards":[{"id":"https://openalex.org/G3405798594","display_name":null,"funder_award_id":"-R2-CX-","funder_id":"https://openalex.org/F4320337430","funder_display_name":"National Institute of Justice"},{"id":"https://openalex.org/G4431066772","display_name":null,"funder_award_id":"2015-R2-CX-0023 and 2014-DN-BX-K031","funder_id":"https://openalex.org/F4320337430","funder_display_name":"National Institute of Justice"},{"id":"https://openalex.org/G5052547404","display_name":null,"funder_award_id":"2015-R2-CX-0023","funder_id":"https://openalex.org/F4320337430","funder_display_name":"National Institute of Justice"},{"id":"https://openalex.org/G5297010808","display_name":null,"funder_award_id":"2014-DN-BX-K031","funder_id":"https://openalex.org/F4320337430","funder_display_name":"National Institute of Justice"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320307758","display_name":"Eli Lilly and Company","ror":"https://ror.org/01qat3289"},{"id":"https://openalex.org/F4320309409","display_name":"Lilly Endowment","ror":"https://ror.org/00cpsd622"},{"id":"https://openalex.org/F4320337430","display_name":"National Institute of Justice","ror":"https://ror.org/00v8p7w89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2955016363.pdf","grobid_xml":"https://content.openalex.org/works/W2955016363.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1966775465","https://openalex.org/W1980168725","https://openalex.org/W1992436001","https://openalex.org/W2009588715","https://openalex.org/W2027093932","https://openalex.org/W2029101308","https://openalex.org/W2058401000","https://openalex.org/W2061539393","https://openalex.org/W2087036932","https://openalex.org/W2090075367","https://openalex.org/W2097576041","https://openalex.org/W2099085143","https://openalex.org/W2104549677","https://openalex.org/W2108234281","https://openalex.org/W2110417468","https://openalex.org/W2119444539","https://openalex.org/W2134783591","https://openalex.org/W2149791927","https://openalex.org/W2166501262","https://openalex.org/W2284253967","https://openalex.org/W2477863367","https://openalex.org/W2493472693","https://openalex.org/W2510973425","https://openalex.org/W2511515754","https://openalex.org/W2529241974","https://openalex.org/W2613409207","https://openalex.org/W2737435306","https://openalex.org/W2906926620","https://openalex.org/W2952353133"],"related_works":["https://openalex.org/W1981780420","https://openalex.org/W2182707996","https://openalex.org/W45233828","https://openalex.org/W2964988449","https://openalex.org/W2397952901","https://openalex.org/W2029380707","https://openalex.org/W188202134","https://openalex.org/W4255934811","https://openalex.org/W3083218341","https://openalex.org/W4404973076"],"abstract_inverted_index":{"Odyssey":[0,44],"facilitates":[1],"efficient":[2],"and":[3,9,21,40,53],"fast":[4],"genome-wide":[5],"association":[6,19],"analysis":[7],"automation":[8],"can":[10,62],"go":[11],"from":[12],"raw":[13],"genetic":[14],"data":[15,71],"to":[16,47,55],"genome:":[17],"phenome":[18],"visualization":[20],"analyses":[22],"results":[23],"in":[24],"3-8":[25],"h":[26],"on":[27,30,66],"average,":[28],"depending":[29],"the":[31,38],"input":[32],"data,":[33],"choice":[34],"of":[35],"programs":[36],"within":[37],"pipeline":[39],"available":[41],"computer":[42],"resources.":[43],"was":[45],"built":[46],"be":[48],"flexible,":[49],"portable,":[50],"compatible,":[51],"scalable,":[52],"easy":[54],"setup.":[56],"Biologists":[57],"less":[58],"familiar":[59],"with":[60,67],"programing":[61],"now":[63],"work":[64],"hands":[65],"their":[68],"own":[69],"big":[70],"using":[72],"this":[73],"easy-to-use":[74],"pipeline.":[75]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":7},{"year":2020,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
