{"id":"https://openalex.org/W2942448186","doi":"https://doi.org/10.1186/s12859-019-2725-5","title":"Reporting and connecting cell type names and gating definitions through ontologies","display_name":"Reporting and connecting cell type names and gating definitions through ontologies","publication_year":2019,"publication_date":"2019-04-01","ids":{"openalex":"https://openalex.org/W2942448186","doi":"https://doi.org/10.1186/s12859-019-2725-5","mag":"2942448186","pmid":"https://pubmed.ncbi.nlm.nih.gov/31272390"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-019-2725-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-2725-5","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1186/s12859-019-2725-5","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5009238690","display_name":"James A. Overton","orcid":"https://orcid.org/0000-0001-5139-5557"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"James A. Overton","raw_affiliation_strings":["Knocean Inc., Toronto, Ontario, Canada"],"affiliations":[{"raw_affiliation_string":"Knocean Inc., Toronto, Ontario, Canada","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069243187","display_name":"Randi Vita","orcid":"https://orcid.org/0000-0001-8957-7612"},"institutions":[{"id":"https://openalex.org/I1311191458","display_name":"La Jolla Institute for Immunology","ror":"https://ror.org/05vkpd318","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1311191458"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Randi Vita","raw_affiliation_strings":["Division for Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA, USA"],"affiliations":[{"raw_affiliation_string":"Division for Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA, USA","institution_ids":["https://openalex.org/I1311191458"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024859023","display_name":"Patrick Dunn","orcid":"https://orcid.org/0000-0003-1868-9689"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Patrick Dunn","raw_affiliation_strings":["ImmPort Curation Team, NG Health Solutions, Rockville, MD, USA"],"affiliations":[{"raw_affiliation_string":"ImmPort Curation Team, NG Health Solutions, Rockville, MD, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034776323","display_name":"Julie G. Burel","orcid":"https://orcid.org/0000-0003-1692-2758"},"institutions":[{"id":"https://openalex.org/I1311191458","display_name":"La Jolla Institute for Immunology","ror":"https://ror.org/05vkpd318","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1311191458"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Julie G. Burel","raw_affiliation_strings":["Division for Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA, USA"],"affiliations":[{"raw_affiliation_string":"Division for Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA, USA","institution_ids":["https://openalex.org/I1311191458"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005186462","display_name":"Syed Bukhari","orcid":"https://orcid.org/0000-0002-6861-2623"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Syed Ahmad Chan Bukhari","raw_affiliation_strings":["Department of Pathology, Yale School of Medicine, New Haven, Connecticut, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pathology, Yale School of Medicine, New Haven, Connecticut, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110209950","display_name":"Kei\u2010Hoi Cheung","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Kei-Hoi Cheung","raw_affiliation_strings":["Department of Emergency Medicine and Yale Center for Medical Informatics, Yale School of Medicine, New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Department of Emergency Medicine and Yale Center for Medical Informatics, Yale School of Medicine, New Haven, CT, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066562919","display_name":"Steven H. Kleinstein","orcid":"https://orcid.org/0000-0003-4957-1544"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven H. Kleinstein","raw_affiliation_strings":["Department of Pathology, Yale School of Medicine, New Haven, Connecticut, USA","Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pathology, Yale School of Medicine, New Haven, Connecticut, USA","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084833749","display_name":"Alexander D. Diehl","orcid":"https://orcid.org/0000-0001-9990-8331"},"institutions":[{"id":"https://openalex.org/I63190737","display_name":"University at Buffalo, State University of New York","ror":"https://ror.org/01y64my43","country_code":"US","type":"education","lineage":["https://openalex.org/I63190737"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Alexander D. Diehl","raw_affiliation_strings":["Department of Biomedical Informatics, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Jacobs School of Medicine and Biomedical Sciences, University at Buffalo, Buffalo, NY, USA","institution_ids":["https://openalex.org/I63190737"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023547268","display_name":"Bjoern Peters","orcid":"https://orcid.org/0000-0002-8457-6693"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California, San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Bjoern Peters","raw_affiliation_strings":["Department of Medicine, University of California San Diego, La Jolla, CA, USA. bpeters@lji.org","Division for Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA, USA. bpeters@lji.org","Department of Medicine, University of California San Diego, La Jolla, CA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, University of California San Diego, La Jolla, CA, USA. bpeters@lji.org","institution_ids":[]},{"raw_affiliation_string":"Division for Vaccine Discovery, La Jolla Institute for Allergy and Immunology, La Jolla, CA, USA. bpeters@lji.org","institution_ids":[]},{"raw_affiliation_string":"Department of Medicine, University of California San Diego, La Jolla, CA, USA","institution_ids":["https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5023547268"],"corresponding_institution_ids":["https://openalex.org/I36258959"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.8563,"has_fulltext":false,"cited_by_count":12,"citation_normalized_percentile":{"value":0.72428138,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"20","issue":"S5","first_page":"182","last_page":"182"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9933000206947327,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9679999947547913,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6815851926803589},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6699498295783997},{"id":"https://openalex.org/keywords/gating","display_name":"Gating","score":0.6698825359344482},{"id":"https://openalex.org/keywords/mass-cytometry","display_name":"Mass cytometry","score":0.4783708155155182},{"id":"https://openalex.org/keywords/axiom","display_name":"Axiom","score":0.4713318347930908},{"id":"https://openalex.org/keywords/prot\u00e9g\u00e9","display_name":"Prot\u00e9g\u00e9","score":0.4678797125816345},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.438225656747818},{"id":"https://openalex.org/keywords/web-ontology-language","display_name":"Web Ontology Language","score":0.4184049367904663},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.36380207538604736},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.34150874614715576},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3310479521751404},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.17186254262924194},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.16471436619758606},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.11906838417053223},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.0887245237827301},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.08620259165763855}],"concepts":[{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6815851926803589},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6699498295783997},{"id":"https://openalex.org/C194544171","wikidata":"https://www.wikidata.org/wiki/Q21105679","display_name":"Gating","level":2,"score":0.6698825359344482},{"id":"https://openalex.org/C2778015335","wikidata":"https://www.wikidata.org/wiki/Q17051163","display_name":"Mass cytometry","level":4,"score":0.4783708155155182},{"id":"https://openalex.org/C167729594","wikidata":"https://www.wikidata.org/wiki/Q17736","display_name":"Axiom","level":2,"score":0.4713318347930908},{"id":"https://openalex.org/C2779247653","wikidata":"https://www.wikidata.org/wiki/Q2066865","display_name":"Prot\u00e9g\u00e9","level":3,"score":0.4678797125816345},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.438225656747818},{"id":"https://openalex.org/C101230327","wikidata":"https://www.wikidata.org/wiki/Q826165","display_name":"Web Ontology Language","level":3,"score":0.4184049367904663},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.36380207538604736},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34150874614715576},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3310479521751404},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.17186254262924194},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.16471436619758606},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.11906838417053223},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0887245237827301},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.08620259165763855},{"id":"https://openalex.org/C2524010","wikidata":"https://www.wikidata.org/wiki/Q8087","display_name":"Geometry","level":1,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007107","descriptor_name":"Immune System","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007107","descriptor_name":"Immune System","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007107","descriptor_name":"Immune System","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D021122","descriptor_name":"Protein Subunits","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D021122","descriptor_name":"Protein Subunits","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D021122","descriptor_name":"Protein Subunits","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-019-2725-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-2725-5","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:31272390","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/31272390","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:143a76f8dbf943c198ef9fadd6d456bd","is_oa":true,"landing_page_url":"https://doaj.org/article/143a76f8dbf943c198ef9fadd6d456bd","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 20, Iss S5, Pp 259-264 (2019)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5527923","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6509839","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-019-2725-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-2725-5","pdf_url":null,"source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":9,"referenced_works":["https://openalex.org/W1827379041","https://openalex.org/W1963654627","https://openalex.org/W1982967011","https://openalex.org/W2021074129","https://openalex.org/W2044257395","https://openalex.org/W2103017472","https://openalex.org/W2103260426","https://openalex.org/W2557399158","https://openalex.org/W2792468812"],"related_works":["https://openalex.org/W2573887251","https://openalex.org/W2962735030","https://openalex.org/W4289666603","https://openalex.org/W1308093","https://openalex.org/W2952252430","https://openalex.org/W2397702946","https://openalex.org/W2395648879","https://openalex.org/W2404660578","https://openalex.org/W105108921","https://openalex.org/W2253471"],"abstract_inverted_index":{"We":[0,18],"suggest":[1,20],"adoption":[2],"of":[3,23,48],"our":[4,67],"proposed":[5],"format":[6],"for":[7,62,83],"describing":[8],"gating":[9,28],"and":[10,46,76],"cell":[11,78],"type":[12],"definitions":[13,29],"to":[14,26,57,85],"make":[15],"comparisons":[16],"easier.":[17],"also":[19],"a":[21],"number":[22],"new":[24,77],"terms":[25],"describe":[27],"in":[30,41,59,70],"flow":[31],"cytometry":[32],"that":[33],"are":[34],"not":[35],"based":[36],"on":[37,44,72],"molecular":[38],"markers":[39],"captured":[40],"PRO,":[42],"but":[43],"forward-":[45],"side-scatter":[47],"light":[49],"during":[50],"data":[51],"acquisition,":[52],"which":[53],"is":[54],"more":[55],"appropriate":[56],"capture":[58],"the":[60,86],"Ontology":[61],"Biomedical":[63],"Investigations":[64],"(OBI).":[65],"Finally,":[66],"approach":[68],"results":[69],"suggestions":[71],"what":[73],"logical":[74],"axioms":[75],"types":[79],"could":[80],"be":[81],"considered":[82],"addition":[84],"Cell":[87],"Ontology.":[88]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
