{"id":"https://openalex.org/W2919190028","doi":"https://doi.org/10.1186/s12859-019-2613-z","title":"PaperBot: open-source web-based search and metadata organization of scientific literature","display_name":"PaperBot: open-source web-based search and metadata organization of scientific literature","publication_year":2019,"publication_date":"2019-01-24","ids":{"openalex":"https://openalex.org/W2919190028","doi":"https://doi.org/10.1186/s12859-019-2613-z","mag":"2919190028","pmid":"https://pubmed.ncbi.nlm.nih.gov/30678631"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-019-2613-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-2613-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-019-2613-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-019-2613-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5057385529","display_name":"Patricia Maraver","orcid":null},"institutions":[{"id":"https://openalex.org/I162714631","display_name":"George Mason University","ror":"https://ror.org/02jqj7156","country_code":"US","type":"education","lineage":["https://openalex.org/I162714631"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Patricia Maraver","raw_affiliation_strings":["Bioengineering Department; George Mason University, Fairfax, USA","Center for Neural Informatics, Structures, & Plasticity; Krasnow Institute for Advanced Study; George Mason University, Fairfax, USA","Krasnow Institute for Advanced Study","George Mason University, Fairfax, USA","Center for Neural Informatics, Structures, & Plasticity"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering Department; George Mason University, Fairfax, USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Center for Neural Informatics, Structures, & Plasticity; Krasnow Institute for Advanced Study; George Mason University, Fairfax, USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Krasnow Institute for Advanced Study","institution_ids":[]},{"raw_affiliation_string":"George Mason University, Fairfax, USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Center for Neural Informatics, Structures, & Plasticity","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041627450","display_name":"Rub\u00e9n Arma\u00f1anzas","orcid":"https://orcid.org/0000-0003-4049-0000"},"institutions":[{"id":"https://openalex.org/I162714631","display_name":"George Mason University","ror":"https://ror.org/02jqj7156","country_code":"US","type":"education","lineage":["https://openalex.org/I162714631"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rub\u00e9n Arma\u00f1anzas","raw_affiliation_strings":["Bioengineering Department; George Mason University, Fairfax, USA","Center for Neural Informatics, Structures, & Plasticity; Krasnow Institute for Advanced Study; George Mason University, Fairfax, USA","George Mason University, Fairfax, USA","Center for Neural Informatics, Structures, & Plasticity","Krasnow Institute for Advanced Study"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering Department; George Mason University, Fairfax, USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Center for Neural Informatics, Structures, & Plasticity; Krasnow Institute for Advanced Study; George Mason University, Fairfax, USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"George Mason University, Fairfax, USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Center for Neural Informatics, Structures, & Plasticity","institution_ids":[]},{"raw_affiliation_string":"Krasnow Institute for Advanced Study","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032063950","display_name":"Todd A. Gillette","orcid":"https://orcid.org/0000-0001-6896-4824"},"institutions":[{"id":"https://openalex.org/I162714631","display_name":"George Mason University","ror":"https://ror.org/02jqj7156","country_code":"US","type":"education","lineage":["https://openalex.org/I162714631"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Todd A. Gillette","raw_affiliation_strings":["Center for Neural Informatics, Structures, & Plasticity; Krasnow Institute for Advanced Study; George Mason University, Fairfax, USA","George Mason University, Fairfax, USA","Krasnow Institute for Advanced Study","Center for Neural Informatics, Structures, & Plasticity"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Neural Informatics, Structures, & Plasticity; Krasnow Institute for Advanced Study; George Mason University, Fairfax, USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"George Mason University, Fairfax, USA","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Krasnow Institute for Advanced Study","institution_ids":[]},{"raw_affiliation_string":"Center for Neural Informatics, Structures, & Plasticity","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5087672831","display_name":"Giorgio A. Ascoli","orcid":"https://orcid.org/0000-0002-0964-676X"},"institutions":[{"id":"https://openalex.org/I162714631","display_name":"George Mason University","ror":"https://ror.org/02jqj7156","country_code":"US","type":"education","lineage":["https://openalex.org/I162714631"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Giorgio A. Ascoli","raw_affiliation_strings":["Bioengineering Department; George Mason University, Fairfax, USA. ascoli@gmu.edu","Center for Neural Informatics, Structures, & Plasticity; Krasnow Institute for Advanced Study; George Mason University, Fairfax, USA. ascoli@gmu.edu","Krasnow Institute for Advanced Study","Center for Neural Informatics, Structures, & Plasticity","George Mason University, Fairfax, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioengineering Department; George Mason University, Fairfax, USA. ascoli@gmu.edu","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Center for Neural Informatics, Structures, & Plasticity; Krasnow Institute for Advanced Study; George Mason University, Fairfax, USA. ascoli@gmu.edu","institution_ids":["https://openalex.org/I162714631"]},{"raw_affiliation_string":"Krasnow Institute for Advanced Study","institution_ids":[]},{"raw_affiliation_string":"Center for Neural Informatics, Structures, & Plasticity","institution_ids":[]},{"raw_affiliation_string":"George Mason University, Fairfax, USA","institution_ids":["https://openalex.org/I162714631"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I162714631"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":4.4353,"has_fulltext":true,"cited_by_count":20,"citation_normalized_percentile":{"value":0.9571739,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"20","issue":"1","first_page":"50","last_page":"50"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9455999732017517,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.910099983215332,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8422085046768188},{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.6781250834465027},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5994839668273926},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5740687847137451},{"id":"https://openalex.org/keywords/web-crawler","display_name":"Web crawler","score":0.4740336239337921},{"id":"https://openalex.org/keywords/digital-library","display_name":"Digital library","score":0.4701279103755951},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.45176225900650024}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8422085046768188},{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.6781250834465027},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5994839668273926},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5740687847137451},{"id":"https://openalex.org/C13743948","wikidata":"https://www.wikidata.org/wiki/Q45842","display_name":"Web crawler","level":2,"score":0.4740336239337921},{"id":"https://openalex.org/C513874922","wikidata":"https://www.wikidata.org/wiki/Q212805","display_name":"Digital library","level":3,"score":0.4701279103755951},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.45176225900650024},{"id":"https://openalex.org/C124952713","wikidata":"https://www.wikidata.org/wiki/Q8242","display_name":"Literature","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C142362112","wikidata":"https://www.wikidata.org/wiki/Q735","display_name":"Art","level":0,"score":0.0},{"id":"https://openalex.org/C164913051","wikidata":"https://www.wikidata.org/wiki/Q482","display_name":"Poetry","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011642","descriptor_name":"Publications","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016206","descriptor_name":"Databases, Bibliographic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016206","descriptor_name":"Databases, Bibliographic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016206","descriptor_name":"Databases, Bibliographic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035843","descriptor_name":"Biomedical Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-019-2613-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-2613-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-019-2613-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"mag:30678631","is_oa":false,"landing_page_url":"https://repository.kulib.kyoto-u.ac.jp/dspace/bitstream/2433/122319/1/Hazama_tohogaku_2005.pdf","pdf_url":null,"source":{"id":"https://openalex.org/S4306552540","display_name":"\u6771\u65b9\u5b66","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"\u6771\u65b9\u5b66","raw_type":null},{"id":"pmid:30678631","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30678631","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:6345070","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6345070","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:doaj.org/article:ddbb19a4477345c195fa5087072d297c","is_oa":true,"landing_page_url":"https://doaj.org/article/ddbb19a4477345c195fa5087072d297c","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 20, Iss 1, Pp 1-13 (2019)","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12859-019-2613-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-019-2613-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-019-2613-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3515618948","display_name":null,"funder_award_id":"U01MH114829","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4177482270","display_name":null,"funder_award_id":"R01NS086082","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5753608401","display_name":null,"funder_award_id":"R01NS39600","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5945143151","display_name":null,"funder_award_id":"U01 MH114829","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G6523194972","display_name":null,"funder_award_id":"R01 NS086082","funder_id":"https://openalex.org/F4320337359","funder_display_name":"National Institute of Neurological Disorders and Stroke"},{"id":"https://openalex.org/G7439062176","display_name":null,"funder_award_id":"R01 NS039600","funder_id":"https://openalex.org/F4320337359","funder_display_name":"National Institute of Neurological Disorders and Stroke"}],"funders":[{"id":"https://openalex.org/F4320309029","display_name":"George Mason University","ror":"https://ror.org/02jqj7156"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"},{"id":"https://openalex.org/F4320337359","display_name":"National Institute of Neurological Disorders and Stroke","ror":"https://ror.org/01s5ya894"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2919190028.pdf","grobid_xml":"https://content.openalex.org/works/W2919190028.grobid-xml"},"referenced_works_count":45,"referenced_works":["https://openalex.org/W8550301","https://openalex.org/W64676784","https://openalex.org/W281630335","https://openalex.org/W652438635","https://openalex.org/W1858759550","https://openalex.org/W1927830505","https://openalex.org/W1988512338","https://openalex.org/W1990584060","https://openalex.org/W1991869139","https://openalex.org/W2001291669","https://openalex.org/W2023754051","https://openalex.org/W2057240659","https://openalex.org/W2059715474","https://openalex.org/W2065108361","https://openalex.org/W2086383321","https://openalex.org/W2091266855","https://openalex.org/W2107062718","https://openalex.org/W2110462941","https://openalex.org/W2121539402","https://openalex.org/W2123029908","https://openalex.org/W2124260444","https://openalex.org/W2124475033","https://openalex.org/W2124496187","https://openalex.org/W2124582661","https://openalex.org/W2133585176","https://openalex.org/W2138150506","https://openalex.org/W2138281354","https://openalex.org/W2145687948","https://openalex.org/W2161311669","https://openalex.org/W2167868121","https://openalex.org/W2168840105","https://openalex.org/W2169041128","https://openalex.org/W2184425661","https://openalex.org/W2250857132","https://openalex.org/W2269487093","https://openalex.org/W2529518929","https://openalex.org/W2583596256","https://openalex.org/W2605454765","https://openalex.org/W2606673240","https://openalex.org/W2953216885","https://openalex.org/W3164292494","https://openalex.org/W4238185984","https://openalex.org/W4240572877","https://openalex.org/W4253875976","https://openalex.org/W4292887282"],"related_works":["https://openalex.org/W3005260231","https://openalex.org/W2904469652","https://openalex.org/W4362647146","https://openalex.org/W2383572231","https://openalex.org/W2042034567","https://openalex.org/W3179424333","https://openalex.org/W2058118494","https://openalex.org/W2392768766","https://openalex.org/W4230722125","https://openalex.org/W2149158941"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,158,179,197],"biomedical":[2],"literature":[3],"is":[4,232],"expanding":[5],"at":[6],"ever-increasing":[7],"rates,":[8],"and":[9,23,43,72,80,90,111,151,176,253,267,293,305],"it":[10,63],"has":[11],"become":[12],"extremely":[13],"challenging":[14],"for":[15,186],"researchers":[16],"to":[17,40,214,221,240,264,272],"keep":[18],"abreast":[19],"of":[20,30,103,125,144,154,164,172,200,210,275,280,290,320],"new":[21],"data":[22,255,283],"discoveries":[24],"even":[25],"in":[26,234,243,278],"their":[27,148],"own":[28],"domains":[29],"expertise.":[31],"We":[32],"introduce":[33],"PaperBot,":[34],"a":[35,100,183,206,218,235,259,325],"configurable,":[36],"modular,":[37],"open-source":[38],"crawler":[39],"automatically":[41],"find":[42],"efficiently":[44,242],"index":[45],"peer-reviewed":[46,269],"publications":[47],"based":[48,94,146],"on":[49,95,147],"periodic":[50],"full-text":[51,91],"searches":[52],"across":[53],"publisher":[54],"web":[55,139],"portals.":[56],"RESULTS:":[57],"PaperBot":[58,78,126,201,263,285,311],"may":[59],"operate":[60],"stand-alone":[61],"or":[62,194,220,225],"can":[64],"be":[65,222],"easily":[66],"integrated":[67,223],"with":[68,224],"other":[69],"software":[70],"platforms":[71],"knowledge":[73],"bases.":[74],"Without":[75],"user":[76,132],"interactions,":[77],"retrieves":[79],"stores":[81],"the":[82,122,128,131,161,170,247,281,287,317],"bibliographic":[83],"information":[84,137,322],"(full":[85],"reference,":[86],"corresponding":[87],"email":[88],"contact,":[89],"keyword":[92],"hits)":[93],"pre-set":[96],"search":[97,120,173],"logic":[98],"from":[99,130],"wide":[101],"range":[102],"sources":[104],"including":[105],"Elsevier,":[106],"Wiley,":[107],"Springer,":[108],"PubMed/PubMedCentral,":[109],"Nature,":[110],"Google":[112],"Scholar.":[113],"Although":[114],"different":[115,119],"publishing":[116],"sites":[117],"require":[118],"configurations,":[121],"common":[123],"interface":[124],"unifies":[127],"process":[129],"perspective.":[133],"Once":[134],"saved,":[135],"all":[136,165],"becomes":[138],"accessible":[140],"allowing":[141],"efficient":[142],"triage":[143],"articles":[145,188,270],"actual":[149],"relevance":[150],"seamless":[152],"annotation":[153],"suitable":[155],"metadata":[156,177,231,295],"content.":[157],"platform":[159],"allows":[160],"agile":[162],"reconfiguration":[163],"key":[166],"details,":[167],"such":[168,297],"as":[169,205,217,298],"selection":[171],"portals,":[174],"keywords,":[175],"dimensions.":[178],"tool":[180],"also":[181],"provides":[182],"one-click":[184],"option":[185],"adding":[187],"manually":[189],"via":[190],"digital":[191,273,306],"object":[192],"identifier":[193],"PubMed":[195],"ID.":[196],"microservice":[198],"architecture":[199],"implements":[202],"these":[203],"capabilities":[204],"loosely":[207],"coupled":[208],"collection":[209],"distinct":[211],"modules":[212],"devised":[213],"work":[215],"separately,":[216],"whole,":[219],"replaced":[226],"by":[227,245],"additional":[228],"software.":[229],"All":[230],"stored":[233],"schema-less":[236],"NoSQL":[237],"database":[238],"designed":[239],"scale":[241],"clusters":[244],"minimizing":[246],"impedance":[248],"mismatch":[249],"between":[250],"relational":[251],"model":[252],"in-memory":[254],"structures.":[256],"CONCLUSIONS:":[257],"As":[258],"testbed,":[260],"we":[261],"deployed":[262],"help":[265],"identify":[266],"manage":[268],"pertaining":[271],"reconstructions":[274],"neuronal":[276],"morphology":[277],"support":[279],"NeuroMorpho.Org":[282,313],"repository.":[284],"enabled":[286],"custom":[288],"definition":[289],"both":[291],"general":[292],"neuroscience-specific":[294],"dimensions,":[296],"animal":[299],"species,":[300],"brain":[301],"region,":[302],"neuron":[303],"type,":[304],"tracing":[307],"system.":[308],"Since":[309],"deployment,":[310],"helped":[312],"more":[314],"than":[315],"quintuple":[316],"yearly":[318],"volume":[319],"processed":[321],"while":[323],"maintaining":[324],"stable":[326],"personnel":[327],"workforce.":[328]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2}],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2025-10-10T00:00:00"}
