{"id":"https://openalex.org/W2904436729","doi":"https://doi.org/10.1186/s12859-018-2470-1","title":"Towards a supervised classification of neocortical interneuron morphologies","display_name":"Towards a supervised classification of neocortical interneuron morphologies","publication_year":2018,"publication_date":"2018-12-01","ids":{"openalex":"https://openalex.org/W2904436729","doi":"https://doi.org/10.1186/s12859-018-2470-1","mag":"2904436729","pmid":"https://pubmed.ncbi.nlm.nih.gov/30558530"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-018-2470-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2470-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2470-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2470-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065703423","display_name":"Bojan Mihaljevi\u0107","orcid":"https://orcid.org/0000-0002-1656-6135"},"institutions":[{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":true,"raw_author_name":"Bojan Mihaljevi\u0107","raw_affiliation_strings":["Departamento de Inteligencia Artificial, Universidad Polit\u00e9cnica de Madrid, Boadilla del Monte, 28660, Spain. bmihaljevic@fi.upm.es","Departamento de Inteligencia Artificial, Universidad Polit\u00e9cnica de Madrid, Boadilla del Monte, 28660, Spain"],"raw_orcid":"https://orcid.org/0000-0002-1656-6135","affiliations":[{"raw_affiliation_string":"Departamento de Inteligencia Artificial, Universidad Polit\u00e9cnica de Madrid, Boadilla del Monte, 28660, Spain. bmihaljevic@fi.upm.es","institution_ids":["https://openalex.org/I88060688"]},{"raw_affiliation_string":"Departamento de Inteligencia Artificial, Universidad Polit\u00e9cnica de Madrid, Boadilla del Monte, 28660, Spain","institution_ids":["https://openalex.org/I88060688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049812833","display_name":"Pedro Larra\u00f1aga","orcid":"https://orcid.org/0000-0003-0652-9872"},"institutions":[{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Pedro Larra\u00f1aga","raw_affiliation_strings":["Departamento de Inteligencia Artificial, Universidad Polit\u00e9cnica de Madrid, Boadilla del Monte, 28660, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Inteligencia Artificial, Universidad Polit\u00e9cnica de Madrid, Boadilla del Monte, 28660, Spain","institution_ids":["https://openalex.org/I88060688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026777668","display_name":"Ruth Benavides\u2010Piccione","orcid":"https://orcid.org/0000-0003-3288-9820"},"institutions":[{"id":"https://openalex.org/I2184545","display_name":"Instituto Cajal","ror":"https://ror.org/012gwbh42","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I2184545"]},{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Ruth Benavides-Piccione","raw_affiliation_strings":["Laboratorio Cajal de Circuitos Corticales, Universidad Polit\u00e9cnica de Madrid and Instituto Cajal (CSIC), Pozuelo de Alarc\u00f3n, 28223, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratorio Cajal de Circuitos Corticales, Universidad Polit\u00e9cnica de Madrid and Instituto Cajal (CSIC), Pozuelo de Alarc\u00f3n, 28223, Spain","institution_ids":["https://openalex.org/I2184545","https://openalex.org/I88060688"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048268124","display_name":"Sean Hill","orcid":"https://orcid.org/0000-0001-8055-860X"},"institutions":[{"id":"https://openalex.org/I1338135719","display_name":"Centre for Addiction and Mental Health","ror":"https://ror.org/03e71c577","country_code":"CA","type":"healthcare","lineage":["https://openalex.org/I1338135719"]},{"id":"https://openalex.org/I5124864","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052","country_code":"CH","type":"education","lineage":["https://openalex.org/I2799323385","https://openalex.org/I5124864"]}],"countries":["CA","CH"],"is_corresponding":false,"raw_author_name":"Sean Hill","raw_affiliation_strings":["Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Gen\u00e8ve, CH-1202, Switzerland","Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, M5T 1R8, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Blue Brain Project, \u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne, Gen\u00e8ve, CH-1202, Switzerland","institution_ids":["https://openalex.org/I5124864"]},{"raw_affiliation_string":"Krembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, M5T 1R8, Canada","institution_ids":["https://openalex.org/I1338135719"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040552736","display_name":"Javier DeFelipe","orcid":"https://orcid.org/0000-0001-5484-0660"},"institutions":[{"id":"https://openalex.org/I2184545","display_name":"Instituto Cajal","ror":"https://ror.org/012gwbh42","country_code":"ES","type":"facility","lineage":["https://openalex.org/I134820265","https://openalex.org/I2184545"]},{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Javier DeFelipe","raw_affiliation_strings":["Laboratorio Cajal de Circuitos Corticales, Universidad Polit\u00e9cnica de Madrid and Instituto Cajal (CSIC), Pozuelo de Alarc\u00f3n, 28223, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratorio Cajal de Circuitos Corticales, Universidad Polit\u00e9cnica de Madrid and Instituto Cajal (CSIC), Pozuelo de Alarc\u00f3n, 28223, Spain","institution_ids":["https://openalex.org/I2184545","https://openalex.org/I88060688"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5010920098","display_name":"Concha Bielza","orcid":"https://orcid.org/0000-0001-7109-2668"},"institutions":[{"id":"https://openalex.org/I88060688","display_name":"Universidad Polit\u00e9cnica de Madrid","ror":"https://ror.org/03n6nwv02","country_code":"ES","type":"education","lineage":["https://openalex.org/I88060688"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Concha Bielza","raw_affiliation_strings":["Departamento de Inteligencia Artificial, Universidad Polit\u00e9cnica de Madrid, Boadilla del Monte, 28660, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departamento de Inteligencia Artificial, Universidad Polit\u00e9cnica de Madrid, Boadilla del Monte, 28660, Spain","institution_ids":["https://openalex.org/I88060688"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5065703423"],"corresponding_institution_ids":["https://openalex.org/I88060688"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.5279,"has_fulltext":true,"cited_by_count":24,"citation_normalized_percentile":{"value":0.81845747,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"19","issue":"1","first_page":"511","last_page":"511"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.8185999989509583,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10581","display_name":"Neural dynamics and brain function","score":0.8185999989509583,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10448","display_name":"Memory and Neural Mechanisms","score":0.054499998688697815,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10077","display_name":"Neuroscience and Neuropharmacology Research","score":0.022299999371170998,"subfield":{"id":"https://openalex.org/subfields/2804","display_name":"Cellular and Molecular Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/interneuron","display_name":"Interneuron","score":0.7837464213371277},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.5839178562164307},{"id":"https://openalex.org/keywords/neocortex","display_name":"Neocortex","score":0.5408064126968384},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5030235648155212},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.40860167145729065},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3333406448364258}],"concepts":[{"id":"https://openalex.org/C2779296341","wikidata":"https://www.wikidata.org/wiki/Q1500732","display_name":"Interneuron","level":3,"score":0.7837464213371277},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.5839178562164307},{"id":"https://openalex.org/C2777222312","wikidata":"https://www.wikidata.org/wiki/Q726562","display_name":"Neocortex","level":2,"score":0.5408064126968384},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5030235648155212},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.40860167145729065},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3333406448364258},{"id":"https://openalex.org/C17077164","wikidata":"https://www.wikidata.org/wiki/Q1185869","display_name":"Inhibitory postsynaptic potential","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002478","descriptor_name":"Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003712","descriptor_name":"Dendrites","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003712","descriptor_name":"Dendrites","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003712","descriptor_name":"Dendrites","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003712","descriptor_name":"Dendrites","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003712","descriptor_name":"Dendrites","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D007395","descriptor_name":"Interneurons","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017208","descriptor_name":"Rats, Wistar","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017208","descriptor_name":"Rats, Wistar","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017208","descriptor_name":"Rats, Wistar","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017208","descriptor_name":"Rats, Wistar","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017208","descriptor_name":"Rats, Wistar","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019579","descriptor_name":"Neocortex","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D019579","descriptor_name":"Neocortex","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D019579","descriptor_name":"Neocortex","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D019579","descriptor_name":"Neocortex","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D019579","descriptor_name":"Neocortex","qualifier_ui":"Q000166","qualifier_name":"cytology","is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1186/s12859-018-2470-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2470-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2470-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30558530","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30558530","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:hispana.mcu.es:35438877","is_oa":false,"landing_page_url":"https://oa.upm.es/54567/","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"BMC Bioinformatics, ISSN 1471-2105, 2018-12, Vol. 19","raw_type":"PeerReviewed"},{"id":"pmh:oai:digital.csic.es:10261/173607","is_oa":true,"landing_page_url":"http://hdl.handle.net/10261/173607","pdf_url":null,"source":{"id":"https://openalex.org/S4306400616","display_name":"DIGITAL.CSIC (Spanish National Research Council (CSIC))","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134820265","host_organization_name":"Consejo Superior de Investigaciones Cient\u00edficas","host_organization_lineage":["https://openalex.org/I134820265"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"http://purl.org/coar/resource_type/c_6501"},{"id":"pmh:oai:dnet:archivodigit::5f9ec105214e7af867b315b2e946f5db","is_oa":true,"landing_page_url":"http://oa.upm.es/54567/","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, ISSN 1471-2105, 2018-12, Vol. 19","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:doaj.org/article:1ee93846029e496fb6570f55db1a5b12","is_oa":true,"landing_page_url":"https://doaj.org/article/1ee93846029e496fb6570f55db1a5b12","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 19, Iss 1, Pp 1-22 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5267432","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC6296106","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:infoscience.epfl.ch:262735","is_oa":true,"landing_page_url":"http://infoscience.epfl.ch/record/262735","pdf_url":null,"source":{"id":"https://openalex.org/S4306400487","display_name":"Infoscience (Ecole Polytechnique F\u00e9d\u00e9rale de Lausanne)","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"research article"},{"id":"pmh:oai:pubmedcentral.nih.gov:6296106","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6296106","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-018-2470-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2470-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2470-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","score":0.5400000214576721,"id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G1918095058","display_name":null,"funder_award_id":"HBP SGA2","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G1936523210","display_name":null,"funder_award_id":"S2013","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G2222999142","display_name":null,"funder_award_id":"TIN2016-79684-P","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G2228619995","display_name":null,"funder_award_id":"C080020-09","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G3590194597","display_name":null,"funder_award_id":"TIN2016-79684","funder_id":"https://openalex.org/F4320321837","funder_display_name":"Ministerio de Econom\u00eda y Competitividad"},{"id":"https://openalex.org/G5193558347","display_name":null,"funder_award_id":"720270","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G5766349579","display_name":"Human Brain Project Specific Grant Agreement 2","funder_award_id":"785907","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6607577419","display_name":null,"funder_award_id":"785907","funder_id":"https://openalex.org/F4320332999","funder_display_name":"Horizon 2020 Framework Programme"},{"id":"https://openalex.org/G7493594167","display_name":null,"funder_award_id":"S2013/ICE-2845-CASI-CAM-CM","funder_id":"https://openalex.org/F4320325116","funder_display_name":"Consejer\u00eda de Educaci\u00f3n, Juventud y Deporte, Comunidad de Madrid"},{"id":"https://openalex.org/G8681506169","display_name":null,"funder_award_id":"HBP SGA2","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"}],"funders":[{"id":"https://openalex.org/F4320309764","display_name":"Fundaci\u00f3n BBVA","ror":"https://ror.org/01jzs3b90"},{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320320915","display_name":"\u00c9cole Polytechnique F\u00e9d\u00e9rale de Lausanne","ror":"https://ror.org/02s376052"},{"id":"https://openalex.org/F4320321837","display_name":"Ministerio de Econom\u00eda y Competitividad","ror":"https://ror.org/034900433"},{"id":"https://openalex.org/F4320323113","display_name":"Banco Bilbao Vizcaya Argentaria","ror":"https://ror.org/0537dnd74"},{"id":"https://openalex.org/F4320325116","display_name":"Consejer\u00eda de Educaci\u00f3n, Juventud y Deporte, Comunidad de Madrid","ror":"https://ror.org/038tahs86"},{"id":"https://openalex.org/F4320332999","display_name":"Horizon 2020 Framework Programme","ror":"https://ror.org/00k4n6c32"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2904436729.pdf","grobid_xml":"https://content.openalex.org/works/W2904436729.grobid-xml"},"referenced_works_count":85,"referenced_works":["https://openalex.org/W86409741","https://openalex.org/W94052953","https://openalex.org/W273955616","https://openalex.org/W342038080","https://openalex.org/W652807069","https://openalex.org/W1503398984","https://openalex.org/W1508135620","https://openalex.org/W1513618424","https://openalex.org/W1554944419","https://openalex.org/W1588764503","https://openalex.org/W1594031697","https://openalex.org/W1660390307","https://openalex.org/W1666942233","https://openalex.org/W1896739462","https://openalex.org/W1921182138","https://openalex.org/W1922017469","https://openalex.org/W1924290394","https://openalex.org/W1972978214","https://openalex.org/W1974089633","https://openalex.org/W1992560317","https://openalex.org/W1993055859","https://openalex.org/W1995031373","https://openalex.org/W1995054497","https://openalex.org/W1998341727","https://openalex.org/W2000865365","https://openalex.org/W2011430131","https://openalex.org/W2014476089","https://openalex.org/W2023639956","https://openalex.org/W2025603247","https://openalex.org/W2026133800","https://openalex.org/W2041282815","https://openalex.org/W2041848975","https://openalex.org/W2042967751","https://openalex.org/W2047951563","https://openalex.org/W2053724458","https://openalex.org/W2061186544","https://openalex.org/W2062450961","https://openalex.org/W2064316480","https://openalex.org/W2064886678","https://openalex.org/W2070468940","https://openalex.org/W2074633779","https://openalex.org/W2077356414","https://openalex.org/W2086550814","https://openalex.org/W2097360283","https://openalex.org/W2106525823","https://openalex.org/W2112417784","https://openalex.org/W2114240651","https://openalex.org/W2117317133","https://openalex.org/W2118978333","https://openalex.org/W2119387367","https://openalex.org/W2129620008","https://openalex.org/W2131683071","https://openalex.org/W2131980109","https://openalex.org/W2133864802","https://openalex.org/W2135046866","https://openalex.org/W2138776277","https://openalex.org/W2138891743","https://openalex.org/W2147916701","https://openalex.org/W2151230899","https://openalex.org/W2153635508","https://openalex.org/W2155924534","https://openalex.org/W2156780983","https://openalex.org/W2166303717","https://openalex.org/W2179178098","https://openalex.org/W2231058499","https://openalex.org/W2503929286","https://openalex.org/W2519338513","https://openalex.org/W2547711524","https://openalex.org/W2582743722","https://openalex.org/W2583596256","https://openalex.org/W2608239929","https://openalex.org/W2616038248","https://openalex.org/W2617908299","https://openalex.org/W2744478946","https://openalex.org/W2787894218","https://openalex.org/W2911964244","https://openalex.org/W3085162807","https://openalex.org/W3100570787","https://openalex.org/W4205699531","https://openalex.org/W4233942997","https://openalex.org/W4245426967","https://openalex.org/W4250567079","https://openalex.org/W4252684946","https://openalex.org/W4294541781","https://openalex.org/W6843735874"],"related_works":["https://openalex.org/W2773340159","https://openalex.org/W2054930781","https://openalex.org/W1987038781","https://openalex.org/W2777736219","https://openalex.org/W2051057512","https://openalex.org/W2054754390","https://openalex.org/W2102146626","https://openalex.org/W1779991491","https://openalex.org/W2099952757","https://openalex.org/W2011059219"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1],"challenge":[2],"of":[3,32,109,162,177],"classifying":[4],"cortical":[5],"interneurons":[6,36],"is":[7,192],"yet":[8],"to":[9,145,157,184],"be":[10],"solved.":[11],"Data-driven":[12],"classification":[13,82,190],"into":[14,44],"established":[15],"morphological":[16],"types":[17,101,138],"may":[18,168],"provide":[19],"insight":[20],"and":[21,42,51,68,87,89,98,122,126,132,174,191,198],"practical":[22,185],"value.":[23],"RESULTS:":[24],"We":[25,47,71,91,113,135],"trained":[26,72],"models":[27,141,167],"using":[28],"217":[29],"high-quality":[30,154],"morphologies":[31],"rat":[33],"somatosensory":[34],"neocortex":[35],"reconstructed":[37],"by":[38],"a":[39,73,163],"single":[40],"laboratory":[41],"pre-classified":[43],"eight":[45],"types.":[46,134],"quantified":[48],"103":[49],"axonal":[50],"dendritic":[52,69],"morphometrics,":[53],"including":[54],"novel":[55],"ones":[56],"that":[57],"capture":[58],"features":[59],"such":[60],"as":[61],"arbor":[62],"orientation,":[63],"extent":[64],"in":[65],"layer":[66],"one,":[67],"polarity.":[70],"one-versus-rest":[74],"classifier":[75],"for":[76,117,129,150,188],"each":[77],"type,":[78],"combining":[79],"well-known":[80],"supervised":[81],"algorithms":[83],"with":[84,102,139,143,195],"feature":[85],"selection":[86],"over-":[88],"under-sampling.":[90],"accurately":[92],"classified":[93],"the":[94,103,118,130,137],"nest":[95],"basket,":[96,152],"Martinotti,":[97],"basket":[99,124],"cell":[100],"Martinotti":[104],"model":[105,161],"outperforming":[106],"39":[107],"out":[108],"42":[110],"leading":[111],"neuroscientists.":[112],"had":[114],"moderate":[115],"accuracy":[116,128],"double":[119],"bouquet,":[120],"small":[121],"large":[123,151],"types,":[125],"limited":[127],"chandelier":[131],"bitufted":[133],"characterized":[136],"interpretable":[140],"or":[142],"up":[144],"ten":[146],"morphometrics.":[147],"CONCLUSION:":[148],"Except":[149],"50":[153],"reconstructions":[155],"sufficed":[156],"learn":[158],"an":[159],"accurate":[160],"type.":[164],"Improving":[165],"these":[166],"require":[169],"quantifying":[170],"complex":[171],"arborization":[172],"patterns":[173],"finding":[175],"correlates":[176],"bouton-related":[178],"features.":[179],"Our":[180],"study":[181],"brings":[182],"attention":[183],"aspects":[186],"important":[187],"neuron":[189],"readily":[193],"reproducible,":[194],"all":[196],"code":[197],"data":[199],"available":[200],"online.":[201]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1}],"updated_date":"2026-07-30T17:31:21.811387","created_date":"2025-10-10T00:00:00"}