{"id":"https://openalex.org/W2898959095","doi":"https://doi.org/10.1186/s12859-018-2408-7","title":"ISU FLUture: a veterinary diagnostic laboratory web-based platform to monitor the temporal genetic patterns of Influenza A virus in swine","display_name":"ISU FLUture: a veterinary diagnostic laboratory web-based platform to monitor the temporal genetic patterns of Influenza A virus in swine","publication_year":2018,"publication_date":"2018-10-31","ids":{"openalex":"https://openalex.org/W2898959095","doi":"https://doi.org/10.1186/s12859-018-2408-7","mag":"2898959095","pmid":"https://pubmed.ncbi.nlm.nih.gov/30382842"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-018-2408-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2408-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2408-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2408-7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073280214","display_name":"Michael Zeller","orcid":"https://orcid.org/0000-0001-5505-6931"},"institutions":[{"id":"https://openalex.org/I173911158","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78","country_code":"US","type":"education","lineage":["https://openalex.org/I173911158"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael A Zeller","raw_affiliation_strings":["Bioinformatics and Computational Biology Program, Iowa State University, Ames, IA, USA","Department of Veterinary Microbiology & Preventive Medicine, Iowa State University, Ames, IA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics and Computational Biology Program, Iowa State University, Ames, IA, USA","institution_ids":["https://openalex.org/I173911158"]},{"raw_affiliation_string":"Department of Veterinary Microbiology & Preventive Medicine, Iowa State University, Ames, IA, USA","institution_ids":["https://openalex.org/I173911158"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074627869","display_name":"Tavis K. Anderson","orcid":"https://orcid.org/0000-0002-3138-5535"},"institutions":[{"id":"https://openalex.org/I4210142913","display_name":"National Animal Disease Center","ror":"https://ror.org/04ky99h94","country_code":"US","type":"facility","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210142913","https://openalex.org/I4210154632"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tavis K Anderson","raw_affiliation_strings":["Virus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, USA","institution_ids":["https://openalex.org/I4210142913"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062419519","display_name":"Rasna W Walia","orcid":null},"institutions":[{"id":"https://openalex.org/I4210142913","display_name":"National Animal Disease Center","ror":"https://ror.org/04ky99h94","country_code":"US","type":"facility","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210142913","https://openalex.org/I4210154632"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Rasna W Walia","raw_affiliation_strings":["Virus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, USA","institution_ids":["https://openalex.org/I4210142913"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110095531","display_name":"Amy L. Vincent","orcid":null},"institutions":[{"id":"https://openalex.org/I4210142913","display_name":"National Animal Disease Center","ror":"https://ror.org/04ky99h94","country_code":"US","type":"facility","lineage":["https://openalex.org/I1312222531","https://openalex.org/I1336096307","https://openalex.org/I4210142913","https://openalex.org/I4210154632"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amy L Vincent","raw_affiliation_strings":["Virus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Virus and Prion Research Unit, National Animal Disease Center, USDA-ARS, Ames, IA, USA","institution_ids":["https://openalex.org/I4210142913"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043099682","display_name":"Phillip C. Gauger","orcid":"https://orcid.org/0000-0003-2540-8769"},"institutions":[{"id":"https://openalex.org/I173911158","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78","country_code":"US","type":"education","lineage":["https://openalex.org/I173911158"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Phillip C Gauger","raw_affiliation_strings":["Department of Veterinary Diagnostic & Production Animal Medicine, Iowa State University, 1575 Vet Med, 1850 Christensen Dr, Ames, IA, 50011-1134, USA. pcgauger@iastate.edu","Department of Veterinary Diagnostic & Production Animal Medicine, Iowa State University, 1575 Vet Med, 1850 Christensen Dr, Ames, IA, 50011-1134, USA"],"raw_orcid":"https://orcid.org/0000-0003-2540-8769","affiliations":[{"raw_affiliation_string":"Department of Veterinary Diagnostic & Production Animal Medicine, Iowa State University, 1575 Vet Med, 1850 Christensen Dr, Ames, IA, 50011-1134, USA. pcgauger@iastate.edu","institution_ids":["https://openalex.org/I173911158"]},{"raw_affiliation_string":"Department of Veterinary Diagnostic & Production Animal Medicine, Iowa State University, 1575 Vet Med, 1850 Christensen Dr, Ames, IA, 50011-1134, USA","institution_ids":["https://openalex.org/I173911158"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5043099682"],"corresponding_institution_ids":["https://openalex.org/I173911158"],"apc_list":{"value":2990,"currency":"USD","value_usd":2990},"apc_paid":{"value":2990,"currency":"USD","value_usd":2990},"fwci":3.8466,"has_fulltext":true,"cited_by_count":68,"citation_normalized_percentile":{"value":0.94365231,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":99},"biblio":{"volume":"19","issue":"1","first_page":"397","last_page":"397"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":0.9672999978065491,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10167","display_name":"Influenza Virus Research Studies","score":0.9672999978065491,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11560","display_name":"Animal Disease Management and Epidemiology","score":0.010200000368058681,"subfield":{"id":"https://openalex.org/subfields/1102","display_name":"Agronomy and Crop Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11243","display_name":"Respiratory viral infections research","score":0.006300000008195639,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/virology","display_name":"Virology","score":0.5644637942314148},{"id":"https://openalex.org/keywords/influenza-a-virus","display_name":"Influenza A virus","score":0.5431106090545654},{"id":"https://openalex.org/keywords/virus","display_name":"Virus","score":0.5335527062416077},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.42364245653152466},{"id":"https://openalex.org/keywords/influenza-a-virus-subtype-h5n1","display_name":"Influenza A virus subtype H5N1","score":0.42256003618240356},{"id":"https://openalex.org/keywords/veterinary-medicine","display_name":"Veterinary medicine","score":0.38886570930480957},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2360832393169403}],"concepts":[{"id":"https://openalex.org/C159047783","wikidata":"https://www.wikidata.org/wiki/Q7215","display_name":"Virology","level":1,"score":0.5644637942314148},{"id":"https://openalex.org/C2777546802","wikidata":"https://www.wikidata.org/wiki/Q834390","display_name":"Influenza A virus","level":3,"score":0.5431106090545654},{"id":"https://openalex.org/C2522874641","wikidata":"https://www.wikidata.org/wiki/Q808","display_name":"Virus","level":2,"score":0.5335527062416077},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.42364245653152466},{"id":"https://openalex.org/C519248777","wikidata":"https://www.wikidata.org/wiki/Q160122","display_name":"Influenza A virus subtype H5N1","level":3,"score":0.42256003618240356},{"id":"https://openalex.org/C42972112","wikidata":"https://www.wikidata.org/wiki/Q170201","display_name":"Veterinary medicine","level":1,"score":0.38886570930480957},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2360832393169403}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007753","descriptor_name":"Laboratories","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D007753","descriptor_name":"Laboratories","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D007753","descriptor_name":"Laboratories","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D009976","descriptor_name":"Orthomyxoviridae Infections","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D009976","descriptor_name":"Orthomyxoviridae Infections","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D009976","descriptor_name":"Orthomyxoviridae Infections","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D009976","descriptor_name":"Orthomyxoviridae Infections","qualifier_ui":"Q000662","qualifier_name":"veterinary","is_major_topic":false},{"descriptor_ui":"D009976","descriptor_name":"Orthomyxoviridae Infections","qualifier_ui":"Q000662","qualifier_name":"veterinary","is_major_topic":false},{"descriptor_ui":"D009976","descriptor_name":"Orthomyxoviridae Infections","qualifier_ui":"Q000662","qualifier_name":"veterinary","is_major_topic":false},{"descriptor_ui":"D009976","descriptor_name":"Orthomyxoviridae Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D009976","descriptor_name":"Orthomyxoviridae Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D009976","descriptor_name":"Orthomyxoviridae Infections","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D009980","descriptor_name":"Influenza A virus","qualifier_ui":"Q000302","qualifier_name":"isolation & purification","is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013552","descriptor_name":"Swine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013552","descriptor_name":"Swine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013552","descriptor_name":"Swine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013553","descriptor_name":"Swine Diseases","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D013553","descriptor_name":"Swine Diseases","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D013553","descriptor_name":"Swine Diseases","qualifier_ui":"Q000175","qualifier_name":"diagnosis","is_major_topic":false},{"descriptor_ui":"D013553","descriptor_name":"Swine Diseases","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D013553","descriptor_name":"Swine Diseases","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D013553","descriptor_name":"Swine Diseases","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D013553","descriptor_name":"Swine Diseases","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D013553","descriptor_name":"Swine Diseases","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D013553","descriptor_name":"Swine Diseases","qualifier_ui":"Q000821","qualifier_name":"virology","is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D014481","descriptor_name":"United States","qualifier_ui":"Q000453","qualifier_name":"epidemiology","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025202","descriptor_name":"Molecular Diagnostic Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025202","descriptor_name":"Molecular Diagnostic Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025202","descriptor_name":"Molecular Diagnostic Techniques","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1186/s12859-018-2408-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2408-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2408-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30382842","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30382842","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":"Journal Article"},{"id":"pmh:oai:europepmc.org:5167807","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6211438","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:6211438","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6211438","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:dr.lib.iastate.edu:20.500.12876/8zn7GLdw","is_oa":true,"landing_page_url":"https://dr.lib.iastate.edu/handle/20.500.12876/8zn7GLdw","pdf_url":null,"source":{"id":"https://openalex.org/S4377196104","display_name":"Iowa State University Digital Repository (Iowa State University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I173911158","host_organization_name":"Iowa State University","host_organization_lineage":["https://openalex.org/I173911158"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://doi.org/10.1186/s12859-018-2408-7","raw_type":"article"},{"id":"pmh:oai:doaj.org/article:535c22705d5c4015b508f869d922bfce","is_oa":true,"landing_page_url":"https://doaj.org/article/535c22705d5c4015b508f869d922bfce","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 19, Iss 1, Pp 1-10 (2018)","raw_type":"article"},{"id":"pmh:oai:osti.gov:1618534","is_oa":false,"landing_page_url":"https://www.osti.gov/biblio/1618534","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:osti.gov:1626770","is_oa":false,"landing_page_url":"https://www.osti.gov/biblio/1626770","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"doi:10.1186/s12859-018-2408-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2408-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2408-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G103575219","display_name":null,"funder_award_id":"HHSN272201400008C)","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G2988778103","display_name":null,"funder_award_id":"DE-AC05?","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G365113682","display_name":null,"funder_award_id":"-AC05- 06OR23100","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G491774827","display_name":null,"funder_award_id":"#DE-AC05-06OR23100","funder_id":"https://openalex.org/F4320332382","funder_display_name":"Oak Ridge Institute for Science and Education"},{"id":"https://openalex.org/G5079000793","display_name":null,"funder_award_id":"DE\u2010AC05\u201006OR23100","funder_id":"https://openalex.org/F4320306114","funder_display_name":"U.S. Department of Agriculture"},{"id":"https://openalex.org/G5214264906","display_name":null,"funder_award_id":"DE-AC05-060R23100","funder_id":"https://openalex.org/F4320332382","funder_display_name":"Oak Ridge Institute for Science and Education"},{"id":"https://openalex.org/G7059131728","display_name":null,"funder_award_id":"HHSN272201400008C","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8007998598","display_name":null,"funder_award_id":"DE-AC05-06OR23100","funder_id":"https://openalex.org/F4320332605","funder_display_name":"Agricultural Research Service"},{"id":"https://openalex.org/G857543222","display_name":null,"funder_award_id":"DE-AC05- 06OR23100","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G8820807475","display_name":null,"funder_award_id":"number DE-AC05-06OR23100","funder_id":"https://openalex.org/F4320332382","funder_display_name":"Oak Ridge Institute for Science and Education"}],"funders":[{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320306114","display_name":"U.S. Department of Agriculture","ror":"https://ror.org/01na82s61"},{"id":"https://openalex.org/F4320311090","display_name":"Iowa State University","ror":"https://ror.org/04rswrd78"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332382","display_name":"Oak Ridge Institute for Science and Education","ror":"https://ror.org/0526p1y61"},{"id":"https://openalex.org/F4320332605","display_name":"Agricultural Research Service","ror":"https://ror.org/02d2m2044"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2898959095.pdf","grobid_xml":"https://content.openalex.org/works/W2898959095.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W48990259","https://openalex.org/W1526257973","https://openalex.org/W1528398343","https://openalex.org/W1817385113","https://openalex.org/W1921696809","https://openalex.org/W1924177306","https://openalex.org/W1963793916","https://openalex.org/W1979844273","https://openalex.org/W1982116029","https://openalex.org/W1988533731","https://openalex.org/W2003459588","https://openalex.org/W2010836377","https://openalex.org/W2021210077","https://openalex.org/W2023119818","https://openalex.org/W2029150236","https://openalex.org/W2031611770","https://openalex.org/W2032063214","https://openalex.org/W2044470080","https://openalex.org/W2061333604","https://openalex.org/W2090789808","https://openalex.org/W2100230258","https://openalex.org/W2121008201","https://openalex.org/W2135415614","https://openalex.org/W2138383643","https://openalex.org/W2147901189","https://openalex.org/W2148447408","https://openalex.org/W2154977191","https://openalex.org/W2156541837","https://openalex.org/W2160378127","https://openalex.org/W2164655171","https://openalex.org/W2165173106","https://openalex.org/W2279580999","https://openalex.org/W2312463092","https://openalex.org/W2328977468","https://openalex.org/W2336629522","https://openalex.org/W2525128349","https://openalex.org/W2544073586","https://openalex.org/W2551331317","https://openalex.org/W2563295531","https://openalex.org/W2915177181","https://openalex.org/W4232080945","https://openalex.org/W4233233641","https://openalex.org/W4237767719"],"related_works":["https://openalex.org/W2137143631","https://openalex.org/W2016551366","https://openalex.org/W2188759708","https://openalex.org/W2138564085","https://openalex.org/W2123163123","https://openalex.org/W4386371748","https://openalex.org/W2147145791","https://openalex.org/W2124103225","https://openalex.org/W2162191803","https://openalex.org/W4389981580"],"abstract_inverted_index":{"BACKGROUND:":[0],"Influenza":[1],"A":[2],"Virus":[3],"(IAV)":[4],"causes":[5],"respiratory":[6,49],"disease":[7,50],"in":[8,17,51,69,97,134,155,225,229,241,261,302],"swine":[9,18,52,70,93,199,230,262,274,284],"and":[10,35,53,71,113,124,133,141,150,158,166,169,180,185,197,223,244,267,288,298],"is":[11,114,239,245,255,306],"a":[12,211,248,278],"zoonotic":[13],"pathogen.":[14],"Uncontrolled":[15],"IAV":[16,68,94,125,128,162,192,226,260,275,285,301],"herds":[19],"not":[20],"only":[21],"affects":[22],"animal":[23],"health,":[24],"it":[25],"also":[26],"impacts":[27],"production":[28],"through":[29],"increased":[30],"costs":[31],"associated":[32,104],"with":[33,105,280],"treatment":[34],"prevention":[36],"efforts.":[37],"The":[38,102,178,270,304],"Iowa":[39],"State":[40],"University":[41],"Veterinary":[42],"Diagnostic":[43],"Laboratory":[44],"(ISU":[45],"VDL)":[46],"diagnoses":[47],"influenza":[48],"provides":[54,183,210,277],"epidemiological":[55,168],"analyses":[56],"on":[57,152],"samples":[58,130],"submitted":[59],"by":[60],"veterinarians.":[61],"DESCRIPTION:":[62],"To":[63],"assess":[64],"the":[65,74,87,90,98,137,189,202,232,236,281,296],"incidence":[66],"of":[67,89,111,191,205,213,300],"inform":[72],"stakeholders,":[73],"ISU":[75,91,153,208,233],"FLUture":[76,154,209],"website":[77,305],"was":[78],"developed":[79],"as":[80],"an":[81],"interactive":[82],"visualization":[83],"tool":[84],"that":[85,263],"allows":[86,289],"exploration":[88],"VDL":[92],"aggregate":[95],"data":[96,147,276],"clinical":[99],"diagnostic":[100,106,164,251],"database.":[101],"information":[103,171],"cases":[107,165],"has":[108],"varying":[109],"levels":[110],"completeness":[112],"anonymous,":[115],"but":[116],"minimally":[117],"contains:":[118],"sample":[119],"collection":[120],"date,":[121],"specimen":[122],"type,":[123],"subtype.":[126],"Many":[127],"positive":[129,163],"are":[131,144,148,174],"sequenced,":[132],"these":[135],"cases,":[136],"hemagglutinin":[138],"(HA)":[139],"sequence":[140],"genetic":[142],"classification":[143],"completed.":[145],"These":[146],"collected":[149],"presented":[151,175],"near":[156,242],"real-time,":[157],"more":[159],"than":[160],"6,000":[161],"their":[167],"evolutionary":[170],"since":[172],"2003":[173],"to":[176,216,219,272,291],"date.":[177],"database":[179,237],"web":[181],"interface":[182],"rapid":[184],"unique":[186],"insight":[187],"into":[188],"trends":[190,222],"derived":[193],"from":[194,231],"both":[195],"large-":[196],"small-scale":[198],"farms":[200],"across":[201],"United":[203],"States":[204],"America.":[206],"CONCLUSION:":[207],"suite":[212],"web-based":[214],"tools":[215],"allow":[217],"stakeholders":[218],"search":[220],"for":[221,258],"correlations":[224],"case":[227],"metadata":[228],"VDL.":[234],"Since":[235],"infrastructure":[238],"updated":[240],"real-time":[243,273],"integrated":[246],"within":[247],"high-volume":[249],"veterinary":[250],"laboratory,":[252],"earlier":[253],"detection":[254],"now":[256],"possible":[257],"emerging":[259],"subsequently":[264],"cause":[265],"vaccination":[266],"control":[268,299],"challenges.":[269],"access":[271],"link":[279],"national":[282],"USDA":[283],"surveillance":[286],"system":[287],"veterinarians":[290],"make":[292],"objective":[293],"decisions":[294],"regarding":[295],"management":[297],"swine.":[303],"publicly":[307],"accessible":[308],"at":[309],"http://influenza.cvm.iastate.edu":[310],".":[311]},"counts_by_year":[{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":12},{"year":2023,"cited_by_count":8},{"year":2022,"cited_by_count":14},{"year":2021,"cited_by_count":12},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":4}],"updated_date":"2026-09-11T09:22:31.653822","created_date":"2025-10-10T00:00:00"}
