{"id":"https://openalex.org/W2888821581","doi":"https://doi.org/10.1186/s12859-018-2314-z","title":"Clustering approaches for visual knowledge exploration in molecular interaction networks","display_name":"Clustering approaches for visual knowledge exploration in molecular interaction networks","publication_year":2018,"publication_date":"2018-08-29","ids":{"openalex":"https://openalex.org/W2888821581","doi":"https://doi.org/10.1186/s12859-018-2314-z","mag":"2888821581","pmid":"https://pubmed.ncbi.nlm.nih.gov/30157777"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-018-2314-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2314-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2314-z.pdf","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2314-z.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022319056","display_name":"Marek Ostaszewski","orcid":"https://orcid.org/0000-0003-1473-370X"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":true,"raw_author_name":"Marek Ostaszewski","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 7, Avenue des Hauts-Fourneaux, Esch-Belval, Luxembourg. marek.ostaszewski@uni.lu","Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-Belval, Luxembourg"],"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 7, Avenue des Hauts-Fourneaux, Esch-Belval, Luxembourg. marek.ostaszewski@uni.lu","institution_ids":["https://openalex.org/I186903577"]},{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075246253","display_name":"Emmanuel Kieffer","orcid":"https://orcid.org/0000-0002-5530-8577"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Emmanuel Kieffer","raw_affiliation_strings":["Interdisciplinary Centre for Security, Reliability and Trust, University of Luxembourg, 6, Avenue de la Fonte, Esch-Belval, Luxembourg","Interdisciplinary Centre for Security, Reliability and Trust, University of Luxembourg, Esch-Belval, Luxembourg"],"affiliations":[{"raw_affiliation_string":"Interdisciplinary Centre for Security, Reliability and Trust, University of Luxembourg, 6, Avenue de la Fonte, Esch-Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]},{"raw_affiliation_string":"Interdisciplinary Centre for Security, Reliability and Trust, University of Luxembourg, Esch-Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107678280","display_name":"Gr\u00e9goire Danoy","orcid":"https://orcid.org/0000-0001-9419-4210"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Gr\u00e9goire Danoy","raw_affiliation_strings":["Computer Science and Communications Research Unit, University of Luxembourg, 6, Avenue de la Fonte, Esch-Belval, Luxembourg","Computer Science and Communications Research Unit, University of Luxembourg, Esch-Belval, Luxembourg"],"affiliations":[{"raw_affiliation_string":"Computer Science and Communications Research Unit, University of Luxembourg, 6, Avenue de la Fonte, Esch-Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]},{"raw_affiliation_string":"Computer Science and Communications Research Unit, University of Luxembourg, Esch-Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079833473","display_name":"Reinhard Schneider","orcid":"https://orcid.org/0000-0002-8278-1618"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Reinhard Schneider","raw_affiliation_strings":["Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 7, Avenue des Hauts-Fourneaux, Esch-Belval, Luxembourg","Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-Belval, Luxembourg"],"affiliations":[{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, University of Luxembourg, 7, Avenue des Hauts-Fourneaux, Esch-Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]},{"raw_affiliation_string":"Luxembourg Centre for Systems Biomedicine, University of Luxembourg, Esch-Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5058311932","display_name":"Pascal Bouvry","orcid":"https://orcid.org/0000-0001-9338-2834"},"institutions":[{"id":"https://openalex.org/I186903577","display_name":"University of Luxembourg","ror":"https://ror.org/036x5ad56","country_code":"LU","type":"education","lineage":["https://openalex.org/I186903577"]}],"countries":["LU"],"is_corresponding":false,"raw_author_name":"Pascal Bouvry","raw_affiliation_strings":["Computer Science and Communications Research Unit, University of Luxembourg, 6, Avenue de la Fonte, Esch-Belval, Luxembourg","Computer Science and Communications Research Unit, University of Luxembourg, Esch-Belval, Luxembourg"],"affiliations":[{"raw_affiliation_string":"Computer Science and Communications Research Unit, University of Luxembourg, 6, Avenue de la Fonte, Esch-Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]},{"raw_affiliation_string":"Computer Science and Communications Research Unit, University of Luxembourg, Esch-Belval, Luxembourg","institution_ids":["https://openalex.org/I186903577"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5022319056"],"corresponding_institution_ids":["https://openalex.org/I186903577"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.1862,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.53845386,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":96},"biblio":{"volume":"19","issue":"1","first_page":"308","last_page":"308"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9648000001907349,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.8247779607772827},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7050281763076782},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.6925041079521179},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.633497953414917},{"id":"https://openalex.org/keywords/hierarchical-clustering","display_name":"Hierarchical clustering","score":0.62274169921875},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5374947190284729},{"id":"https://openalex.org/keywords/euclidean-distance","display_name":"Euclidean distance","score":0.5152223706245422},{"id":"https://openalex.org/keywords/knowledge-extraction","display_name":"Knowledge extraction","score":0.47828301787376404},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4622587561607361},{"id":"https://openalex.org/keywords/fuzzy-clustering","display_name":"Fuzzy clustering","score":0.4399740993976593},{"id":"https://openalex.org/keywords/consensus-clustering","display_name":"Consensus clustering","score":0.41913196444511414},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.36022043228149414},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3529885411262512},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.3312460780143738},{"id":"https://openalex.org/keywords/cure-data-clustering-algorithm","display_name":"CURE data clustering algorithm","score":0.2118699848651886},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.09072136878967285}],"concepts":[{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.8247779607772827},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7050281763076782},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.6925041079521179},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.633497953414917},{"id":"https://openalex.org/C92835128","wikidata":"https://www.wikidata.org/wiki/Q1277447","display_name":"Hierarchical clustering","level":3,"score":0.62274169921875},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5374947190284729},{"id":"https://openalex.org/C120174047","wikidata":"https://www.wikidata.org/wiki/Q847073","display_name":"Euclidean distance","level":2,"score":0.5152223706245422},{"id":"https://openalex.org/C120567893","wikidata":"https://www.wikidata.org/wiki/Q1582085","display_name":"Knowledge extraction","level":2,"score":0.47828301787376404},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4622587561607361},{"id":"https://openalex.org/C17212007","wikidata":"https://www.wikidata.org/wiki/Q5511111","display_name":"Fuzzy clustering","level":3,"score":0.4399740993976593},{"id":"https://openalex.org/C186767784","wikidata":"https://www.wikidata.org/wiki/Q5162841","display_name":"Consensus clustering","level":5,"score":0.41913196444511414},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.36022043228149414},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3529885411262512},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.3312460780143738},{"id":"https://openalex.org/C33704608","wikidata":"https://www.wikidata.org/wiki/Q5014717","display_name":"CURE data clustering algorithm","level":4,"score":0.2118699848651886},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.09072136878967285},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-018-2314-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2314-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2314-z.pdf","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30157777","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30157777","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:c8af4d48c14f48e68831b0e48621ed67","is_oa":true,"landing_page_url":"https://doaj.org/article/c8af4d48c14f48e68831b0e48621ed67","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 19, Iss 1, Pp 1-15 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5113530","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6116538","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:orbilu.uni.lu:10993/37040","is_oa":false,"landing_page_url":"https://orbilu.uni.lu/handle/10993/37040","pdf_url":null,"source":{"id":"https://openalex.org/S4306401815","display_name":"Open Repository and Bibliography (University of Luxembourg)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I186903577","host_organization_name":"University of Luxembourg","host_organization_lineage":["https://openalex.org/I186903577"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 19 (1), 308 (2018)","raw_type":"peer reviewed"}],"best_oa_location":{"id":"doi:10.1186/s12859-018-2314-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2314-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2314-z.pdf","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3267933815","display_name":null,"funder_award_id":"9984150","funder_id":"https://openalex.org/F4320321038","funder_display_name":"Fonds National de la Recherche Luxembourg"}],"funders":[{"id":"https://openalex.org/F4320310700","display_name":"Universit\u00e9 du Luxembourg","ror":"https://ror.org/036x5ad56"},{"id":"https://openalex.org/F4320321038","display_name":"Fonds National de la Recherche Luxembourg","ror":"https://ror.org/039z13y21"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2888821581.pdf","grobid_xml":"https://content.openalex.org/works/W2888821581.grobid-xml"},"referenced_works_count":68,"referenced_works":["https://openalex.org/W60164658","https://openalex.org/W87092222","https://openalex.org/W93290947","https://openalex.org/W143174683","https://openalex.org/W217162355","https://openalex.org/W799063744","https://openalex.org/W893557411","https://openalex.org/W1128809682","https://openalex.org/W1511522460","https://openalex.org/W1532325895","https://openalex.org/W1579973977","https://openalex.org/W1649408115","https://openalex.org/W1781517108","https://openalex.org/W1871096589","https://openalex.org/W1894267660","https://openalex.org/W1983066278","https://openalex.org/W1984953641","https://openalex.org/W1989277387","https://openalex.org/W1990297162","https://openalex.org/W1995576455","https://openalex.org/W1998871699","https://openalex.org/W2012070790","https://openalex.org/W2016381774","https://openalex.org/W2019369816","https://openalex.org/W2023250031","https://openalex.org/W2035618305","https://openalex.org/W2043460027","https://openalex.org/W2045478141","https://openalex.org/W2050886929","https://openalex.org/W2060793878","https://openalex.org/W2062518448","https://openalex.org/W2069157810","https://openalex.org/W2070693635","https://openalex.org/W2075900721","https://openalex.org/W2083595371","https://openalex.org/W2086508062","https://openalex.org/W2096173332","https://openalex.org/W2100761975","https://openalex.org/W2109042184","https://openalex.org/W2117875901","https://openalex.org/W2120529703","https://openalex.org/W2122197732","https://openalex.org/W2126105956","https://openalex.org/W2126997165","https://openalex.org/W2127218421","https://openalex.org/W2136850043","https://openalex.org/W2138003801","https://openalex.org/W2140099276","https://openalex.org/W2146026780","https://openalex.org/W2153258203","https://openalex.org/W2157306201","https://openalex.org/W2158190097","https://openalex.org/W2160039585","https://openalex.org/W2161682775","https://openalex.org/W2166933393","https://openalex.org/W2262188337","https://openalex.org/W2299922160","https://openalex.org/W2411305692","https://openalex.org/W2441924832","https://openalex.org/W2497122656","https://openalex.org/W2523314419","https://openalex.org/W2558229157","https://openalex.org/W2559588208","https://openalex.org/W2608467350","https://openalex.org/W2962889697","https://openalex.org/W4213009331","https://openalex.org/W4239852074","https://openalex.org/W6603586546"],"related_works":["https://openalex.org/W2577956156","https://openalex.org/W2476489150","https://openalex.org/W2157179134","https://openalex.org/W2390866118","https://openalex.org/W4312222690","https://openalex.org/W2799087180","https://openalex.org/W2150969552","https://openalex.org/W2406185607","https://openalex.org/W4224256651","https://openalex.org/W4231226332"],"abstract_inverted_index":{"In":[0],"this":[1],"work":[2],"we":[3],"examined":[4],"the":[5,42,48,67],"impact":[6],"of":[7,13,33,44,57],"different":[8],"distance":[9,23,49],"functions":[10,24,50,59],"on":[11],"clustering":[12,61],"a":[14],"visual":[15,80],"biomedical":[16],"knowledge":[17,64,81],"repository.":[18],"We":[19,36,70],"found":[20],"that":[21,72],"combining":[22],"may":[25],"be":[26,76],"beneficial":[27],"for":[28,79],"clustering,":[29],"and":[30,55,63],"improve":[31],"exploration":[32],"such":[34],"repositories.":[35],"proposed":[37],"bi-level":[38],"optimization":[39],"to":[40],"evaluate":[41],"importance":[43],"order":[45,56],"by":[46],"which":[47],"are":[51],"combined.":[52],"Both":[53],"combination":[54],"these":[58],"affected":[60],"quality":[62],"recognition":[65],"in":[66],"considered":[68],"benchmarks.":[69],"propose":[71],"multiple":[73],"dimensions":[74],"can":[75],"utilized":[77],"simultaneously":[78],"exploration.":[82]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2019,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
