{"id":"https://openalex.org/W2883686584","doi":"https://doi.org/10.1186/s12859-018-2247-6","title":"CEDAR OnDemand: a browser extension to generate ontology-based scientific metadata","display_name":"CEDAR OnDemand: a browser extension to generate ontology-based scientific metadata","publication_year":2018,"publication_date":"2018-07-16","ids":{"openalex":"https://openalex.org/W2883686584","doi":"https://doi.org/10.1186/s12859-018-2247-6","mag":"2883686584","pmid":"https://pubmed.ncbi.nlm.nih.gov/30012108"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-018-2247-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2247-6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2247-6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2247-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076999947","display_name":"Syed Ahmad Chan Bukhari","orcid":"https://orcid.org/0000-0002-6517-5261"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Syed Ahmad Chan Bukhari","raw_affiliation_strings":["Department of Pathology, Yale School of Medicine, New Haven, CT, USA. ahmad.chan@yale.edu","Department of Pathology, Yale School of Medicine, New Haven, CT, USA"],"raw_orcid":"https://orcid.org/0000-0002-6517-5261","affiliations":[{"raw_affiliation_string":"Department of Pathology, Yale School of Medicine, New Haven, CT, USA. ahmad.chan@yale.edu","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Pathology, Yale School of Medicine, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073479149","display_name":"Marcos Mart\u00ednez-Romero","orcid":"https://orcid.org/0000-0002-9814-3258"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Marcos Mart\u00ednez-Romero","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012365943","display_name":"Martin J. O\u2019 Connor","orcid":null},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Martin J. O\u2019 Connor","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091291704","display_name":"Attila L. Egyedi","orcid":"https://orcid.org/0000-0003-0730-5053"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Attila L. Egyedi","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048795530","display_name":"Debra Willrett","orcid":"https://orcid.org/0000-0002-3767-2957"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Debra Willrett","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044043304","display_name":"John Graybeal","orcid":"https://orcid.org/0000-0001-6875-5360"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"John Graybeal","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009128820","display_name":"Mark A. Musen","orcid":"https://orcid.org/0000-0003-3325-793X"},"institutions":[{"id":"https://openalex.org/I97018004","display_name":"Stanford University","ror":"https://ror.org/00f54p054","country_code":"US","type":"education","lineage":["https://openalex.org/I97018004"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mark A. Musen","raw_affiliation_strings":["Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Stanford Center for Biomedical Informatics Research, Stanford University, Stanford, CA, USA","institution_ids":["https://openalex.org/I97018004"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110209950","display_name":"Kei\u2010Hoi Cheung","orcid":null},"institutions":[{"id":"https://openalex.org/I2802730090","display_name":"Yale Cancer Center","ror":"https://ror.org/03j7sze86","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802730090","https://openalex.org/I4210117499","https://openalex.org/I4210165192"]},{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kei-Hoi Cheung","raw_affiliation_strings":["Department of Emergency Medicine and Yale Center for Medical Informatics, Yale University School of Medicine, New Haven, CT, USA. kei.cheung@yale.edu","Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA. kei.cheung@yale.edu","Department of Emergency Medicine and Yale Center for Medical Informatics, Yale University School of Medicine, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Emergency Medicine and Yale Center for Medical Informatics, Yale University School of Medicine, New Haven, CT, USA. kei.cheung@yale.edu","institution_ids":["https://openalex.org/I32971472","https://openalex.org/I2802730090"]},{"raw_affiliation_string":"Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA. kei.cheung@yale.edu","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Department of Emergency Medicine and Yale Center for Medical Informatics, Yale University School of Medicine, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066562919","display_name":"Steven H. Kleinstein","orcid":"https://orcid.org/0000-0003-4957-1544"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven H. Kleinstein","raw_affiliation_strings":["Department of Pathology, Yale School of Medicine, New Haven, CT, USA. steven.kleinstein@yale.edu","Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA. steven.kleinstein@yale.edu","Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology, Yale School of Medicine, New Haven, CT, USA. steven.kleinstein@yale.edu","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA. steven.kleinstein@yale.edu","institution_ids":["https://openalex.org/I32971472"]},{"raw_affiliation_string":"Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA","institution_ids":["https://openalex.org/I32971472"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5110209950"],"corresponding_institution_ids":["https://openalex.org/I2802730090","https://openalex.org/I32971472"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.2631,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.7972126,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"19","issue":"1","first_page":"268","last_page":"268"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7968999743461609,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7968999743461609,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.15199999511241913,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11937","display_name":"Research Data Management Practices","score":0.016899999231100082,"subfield":{"id":"https://openalex.org/subfields/1710","display_name":"Information Systems"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.7541900873184204},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7156484127044678},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5422592163085938},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5028142333030701},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4998478889465332},{"id":"https://openalex.org/keywords/standardization","display_name":"Standardization","score":0.49139395356178284},{"id":"https://openalex.org/keywords/metadata-repository","display_name":"Metadata repository","score":0.46705853939056396},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.34334367513656616}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.7541900873184204},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7156484127044678},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5422592163085938},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5028142333030701},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4998478889465332},{"id":"https://openalex.org/C188087704","wikidata":"https://www.wikidata.org/wiki/Q369577","display_name":"Standardization","level":2,"score":0.49139395356178284},{"id":"https://openalex.org/C153048206","wikidata":"https://www.wikidata.org/wiki/Q3454922","display_name":"Metadata repository","level":3,"score":0.46705853939056396},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.34334367513656616},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000071253","descriptor_name":"Metadata","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064229","descriptor_name":"Biological Ontologies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-018-2247-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2247-6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2247-6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:30012108","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/30012108","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:4fabf5217c8849a5ae0118e5007d03d1","is_oa":true,"landing_page_url":"https://doaj.org/article/4fabf5217c8849a5ae0118e5007d03d1","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 19, Iss 1, Pp 1-6 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:5006114","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/6048706","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-018-2247-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2247-6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2247-6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2184711298","display_name":null,"funder_award_id":"U54 AI117925","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6873799469","display_name":null,"funder_award_id":"U54 AI117925","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2883686584.pdf","grobid_xml":"https://content.openalex.org/works/W2883686584.grobid-xml"},"referenced_works_count":47,"referenced_works":["https://openalex.org/W47183382","https://openalex.org/W90362830","https://openalex.org/W1527927437","https://openalex.org/W1588405331","https://openalex.org/W1600673540","https://openalex.org/W1957272438","https://openalex.org/W2021074129","https://openalex.org/W2028195352","https://openalex.org/W2033377040","https://openalex.org/W2036288429","https://openalex.org/W2044257395","https://openalex.org/W2054575828","https://openalex.org/W2066453373","https://openalex.org/W2105836514","https://openalex.org/W2107751776","https://openalex.org/W2113142309","https://openalex.org/W2116034137","https://openalex.org/W2131660156","https://openalex.org/W2141541659","https://openalex.org/W2142678031","https://openalex.org/W2142793248","https://openalex.org/W2159092541","https://openalex.org/W2162323699","https://openalex.org/W2163040665","https://openalex.org/W2167060800","https://openalex.org/W2180180358","https://openalex.org/W2302501749","https://openalex.org/W2394597347","https://openalex.org/W2396634530","https://openalex.org/W2415732438","https://openalex.org/W2497612950","https://openalex.org/W2553758616","https://openalex.org/W2556833357","https://openalex.org/W2735285652","https://openalex.org/W2744988442","https://openalex.org/W2750987793","https://openalex.org/W2766414528","https://openalex.org/W2768618120","https://openalex.org/W2773787581","https://openalex.org/W2916147039","https://openalex.org/W2950588019","https://openalex.org/W2951384761","https://openalex.org/W2977393556","https://openalex.org/W4243596557","https://openalex.org/W4247986096","https://openalex.org/W4285086121","https://openalex.org/W4400177176"],"related_works":["https://openalex.org/W1552553528","https://openalex.org/W2183628870","https://openalex.org/W3023161639","https://openalex.org/W2008531296","https://openalex.org/W2782431616","https://openalex.org/W2379265733","https://openalex.org/W2394393789","https://openalex.org/W2374379029","https://openalex.org/W1503116306","https://openalex.org/W4299935056"],"abstract_inverted_index":{"BACKGROUND:":[0],"Public":[1],"biomedical":[2],"data":[3,215],"repositories":[4],"often":[5],"provide":[6],"web-based":[7,196],"interfaces":[8,15],"to":[9,29,49,108,118,128],"collect":[10],"experimental":[11],"metadata.":[12,37],"However,":[13],"these":[14],"typically":[16],"reflect":[17],"the":[18,25,35,43,46,66,97,124,130,150,178,188,204,223],"ad":[19],"hoc":[20],"metadata":[21,112,167,197,211],"specification":[22],"practices":[23],"of":[24,32,40,45,65,158,206],"associated":[26],"repositories,":[27],"leading":[28],"a":[30,92,155],"lack":[31,39],"standardization":[33,41],"in":[34,177],"collected":[36],"This":[38,87],"limits":[42],"ability":[44],"source":[47],"datasets":[48,69],"be":[50,71],"broadly":[51],"discovered,":[52],"reused,":[53],"and":[54,63,134,154],"integrated":[55],"with":[56,137],"other":[57,82],"datasets.":[58],"To":[59],"increase":[60],"reuse,":[61],"discoverability,":[62],"reproducibility":[64],"described":[67],"experiments,":[68],"should":[70],"appropriately":[72],"annotated":[73],"by":[74,96],"using":[75],"agreed-upon":[76],"terms,":[77],"ideally":[78],"from":[79],"ontologies":[80,139,162,208],"or":[81],"controlled":[83],"term":[84],"sources.":[85],"RESULTS:":[86],"work":[88],"presents":[89],"\"CEDAR":[90],"OnDemand\",":[91],"browser":[93],"extension":[94],"powered":[95],"NCBO":[98,151],"(National":[99,190],"Center":[100,191],"for":[101,165,172,192,213],"Biomedical":[102],"Ontology)":[103],"BioPortal":[104],"that":[105],"enables":[106],"users":[107],"seamlessly":[109],"enter":[110],"ontology-based":[111],"through":[113,187],"existing":[114],"web":[115,125,174],"forms":[116],"native":[117],"individual":[119],"repositories.":[120,216],"CEDAR":[121,169,184,200,217],"OnDemand":[122,170,185,201,218],"analyzes":[123],"page":[126],"contents":[127],"identify":[129],"text":[131],"input":[132,146],"fields":[133],"associate":[135],"them":[136],"relevant":[138],"which":[140],"are":[141,163],"recommended":[142],"automatically":[143],"based":[144],"upon":[145],"fields'":[147],"labels":[148],"(using":[149],"ontology":[152],"recommender)":[153],"pre-defined":[156],"list":[157],"ontologies.":[159],"These":[160],"field-specific":[161],"used":[164],"controlling":[166],"entry.":[168,198],"works":[171,186],"any":[173],"form":[175],"designed":[176],"HTML":[179],"format.":[180],"We":[181],"demonstrate":[182],"how":[183],"NCBI":[189],"Biotechnology":[193],"Information)":[194],"BioSample":[195],"CONCLUSION:":[199],"helps":[202],"lower":[203],"barrier":[205],"incorporating":[207],"into":[209],"standardized":[210],"entry":[212],"public":[214],"is":[219],"available":[220],"freely":[221],"on":[222],"Google":[224],"Chrome":[225],"store":[226],"https://chrome.google.com/webstore/search/CEDAROnDemand.":[227]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}