{"id":"https://openalex.org/W2805620226","doi":"https://doi.org/10.1186/s12859-018-2156-8","title":"PDZscape: a comprehensive PDZ-protein database","display_name":"PDZscape: a comprehensive PDZ-protein database","publication_year":2018,"publication_date":"2018-04-25","ids":{"openalex":"https://openalex.org/W2805620226","doi":"https://doi.org/10.1186/s12859-018-2156-8","mag":"2805620226","pmid":"https://pubmed.ncbi.nlm.nih.gov/29699484"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-018-2156-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2156-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2156-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2156-8","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5038464726","display_name":"Jitesh Doshi","orcid":"https://orcid.org/0000-0003-3872-1738"},"institutions":[{"id":"https://openalex.org/I4210157422","display_name":"Advanced Centre for Treatment, Research and Education in Cancer","ror":"https://ror.org/05b9pgt88","country_code":"IN","type":"funder","lineage":["https://openalex.org/I2800098698","https://openalex.org/I4210157422"]},{"id":"https://openalex.org/I2800098698","display_name":"Tata Memorial Hospital","ror":"https://ror.org/010842375","country_code":"IN","type":"healthcare","lineage":["https://openalex.org/I2800098698"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Jitesh Doshi","raw_affiliation_strings":["Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India"],"affiliations":[{"raw_affiliation_string":"Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India","institution_ids":["https://openalex.org/I4210157422","https://openalex.org/I2800098698"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030136302","display_name":"Raja Reddy Kuppili","orcid":null},"institutions":[{"id":"https://openalex.org/I2800098698","display_name":"Tata Memorial Hospital","ror":"https://ror.org/010842375","country_code":"IN","type":"healthcare","lineage":["https://openalex.org/I2800098698"]},{"id":"https://openalex.org/I200207707","display_name":"Homi Bhabha National Institute","ror":"https://ror.org/02bv3zr67","country_code":"IN","type":"education","lineage":["https://openalex.org/I200207707"]},{"id":"https://openalex.org/I4210157422","display_name":"Advanced Centre for Treatment, Research and Education in Cancer","ror":"https://ror.org/05b9pgt88","country_code":"IN","type":"funder","lineage":["https://openalex.org/I2800098698","https://openalex.org/I4210157422"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Raja Reddy Kuppili","raw_affiliation_strings":["Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India","Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India"],"affiliations":[{"raw_affiliation_string":"Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India","institution_ids":["https://openalex.org/I200207707"]},{"raw_affiliation_string":"Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India","institution_ids":["https://openalex.org/I4210157422","https://openalex.org/I2800098698"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063413441","display_name":"Siddharth Gurdasani","orcid":null},"institutions":[{"id":"https://openalex.org/I74973139","display_name":"Carnegie Mellon University","ror":"https://ror.org/05x2bcf33","country_code":"US","type":"education","lineage":["https://openalex.org/I74973139"]},{"id":"https://openalex.org/I4210157422","display_name":"Advanced Centre for Treatment, Research and Education in Cancer","ror":"https://ror.org/05b9pgt88","country_code":"IN","type":"funder","lineage":["https://openalex.org/I2800098698","https://openalex.org/I4210157422"]},{"id":"https://openalex.org/I2800098698","display_name":"Tata Memorial Hospital","ror":"https://ror.org/010842375","country_code":"IN","type":"healthcare","lineage":["https://openalex.org/I2800098698"]}],"countries":["IN","US"],"is_corresponding":false,"raw_author_name":"Siddharth Gurdasani","raw_affiliation_strings":["Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India","Present Address: Carnegie Mellon University, 5000 Forbes Ave, Pittsburgh, PA, 15213, USA"],"affiliations":[{"raw_affiliation_string":"Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India","institution_ids":["https://openalex.org/I4210157422","https://openalex.org/I2800098698"]},{"raw_affiliation_string":"Present Address: Carnegie Mellon University, 5000 Forbes Ave, Pittsburgh, PA, 15213, USA","institution_ids":["https://openalex.org/I74973139"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037824590","display_name":"Navneet Venkatakrishnan","orcid":null},"institutions":[{"id":"https://openalex.org/I2800098698","display_name":"Tata Memorial Hospital","ror":"https://ror.org/010842375","country_code":"IN","type":"healthcare","lineage":["https://openalex.org/I2800098698"]},{"id":"https://openalex.org/I4210157422","display_name":"Advanced Centre for Treatment, Research and Education in Cancer","ror":"https://ror.org/05b9pgt88","country_code":"IN","type":"funder","lineage":["https://openalex.org/I2800098698","https://openalex.org/I4210157422"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Navneet Venkatakrishnan","raw_affiliation_strings":["Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India"],"affiliations":[{"raw_affiliation_string":"Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India","institution_ids":["https://openalex.org/I4210157422","https://openalex.org/I2800098698"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5069806075","display_name":"Amit Saxena","orcid":"https://orcid.org/0000-0002-5019-2595"},"institutions":[{"id":"https://openalex.org/I1331500379","display_name":"Centre for Development of Advanced Computing","ror":"https://ror.org/022abst40","country_code":"IN","type":"facility","lineage":["https://openalex.org/I1331500379","https://openalex.org/I4210121746"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Amit Saxena","raw_affiliation_strings":["Centre for Development of Advanced Computing (C-DAC), Pune University Campus, Ganesh Khind, Pune, Maharashtra, 411007, India"],"affiliations":[{"raw_affiliation_string":"Centre for Development of Advanced Computing (C-DAC), Pune University Campus, Ganesh Khind, Pune, Maharashtra, 411007, India","institution_ids":["https://openalex.org/I1331500379"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5064388098","display_name":"Kakoli Bose","orcid":"https://orcid.org/0000-0002-3748-6003"},"institutions":[{"id":"https://openalex.org/I200207707","display_name":"Homi Bhabha National Institute","ror":"https://ror.org/02bv3zr67","country_code":"IN","type":"education","lineage":["https://openalex.org/I200207707"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Kakoli Bose","raw_affiliation_strings":["Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India. kbose@actrec.gov.in","Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India. kbose@actrec.gov.in","Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India"],"affiliations":[{"raw_affiliation_string":"Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India. kbose@actrec.gov.in","institution_ids":[]},{"raw_affiliation_string":"Integrated Biophysics and Structural Biology Lab, Advanced Centre for Treatment, Research and Education in Cancer (ACTREC), Tata Memorial Centre, Kharghar, Navi Mumbai, 410210, India. kbose@actrec.gov.in","institution_ids":[]},{"raw_affiliation_string":"Homi Bhabha National Institute, Training School Complex, Anushakti Nagar, Mumbai, 400094, India","institution_ids":["https://openalex.org/I200207707"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5038464726"],"corresponding_institution_ids":["https://openalex.org/I2800098698","https://openalex.org/I4210157422"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.1175,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.45495398,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"19","issue":"1","first_page":"160","last_page":"160"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12065","display_name":"Hippo pathway signaling and YAP/TAZ","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12065","display_name":"Hippo pathway signaling and YAP/TAZ","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9761999845504761,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9750000238418579,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/pdz-domain","display_name":"PDZ domain","score":0.931442141532898},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.8224445581436157},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank (RCSB PDB)","score":0.6000354886054993},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5590227246284485},{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.5477461814880371},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4419933557510376},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.405434250831604},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3047823905944824},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16202139854431152},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.10704448819160461},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.07856059074401855}],"concepts":[{"id":"https://openalex.org/C154428179","wikidata":"https://www.wikidata.org/wiki/Q24721050","display_name":"PDZ domain","level":2,"score":0.931442141532898},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.8224445581436157},{"id":"https://openalex.org/C65556437","wikidata":"https://www.wikidata.org/wiki/Q766195","display_name":"Protein Data Bank (RCSB PDB)","level":2,"score":0.6000354886054993},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5590227246284485},{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.5477461814880371},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4419933557510376},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.405434250831604},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3047823905944824},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16202139854431152},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.10704448819160461},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.07856059074401855}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013223","descriptor_name":"Statistics as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054731","descriptor_name":"PDZ Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054731","descriptor_name":"PDZ Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054731","descriptor_name":"PDZ Domains","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-018-2156-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2156-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2156-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29699484","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29699484","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:5765c78b1da045eebe5ce81a78f35c1c","is_oa":true,"landing_page_url":"https://doaj.org/article/5765c78b1da045eebe5ce81a78f35c1c","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 19, Iss 1, Pp 1-6 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:4851109","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5921291","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-018-2156-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2156-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2156-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2805620226.pdf","grobid_xml":"https://content.openalex.org/works/W2805620226.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1987704449","https://openalex.org/W2008472371","https://openalex.org/W2043764521","https://openalex.org/W2055043387","https://openalex.org/W2057545775","https://openalex.org/W2074570440","https://openalex.org/W2086868097","https://openalex.org/W2127325055","https://openalex.org/W2130479394","https://openalex.org/W2133167066","https://openalex.org/W2142678478","https://openalex.org/W2148853951","https://openalex.org/W2157942351","https://openalex.org/W2167818972"],"related_works":["https://openalex.org/W2162388472","https://openalex.org/W3132544722","https://openalex.org/W3181892255","https://openalex.org/W4232154957","https://openalex.org/W2103435205","https://openalex.org/W2022209941","https://openalex.org/W4292058683","https://openalex.org/W4205671017","https://openalex.org/W4307362031","https://openalex.org/W2052301877"],"abstract_inverted_index":{"PDZ-containing":[0,85],"proteins":[1,35,50,86,158],"comprise":[2],"one":[3,95],"of":[4,25,47,65,115,186],"the":[5,39,79,141,150,176],"most":[6],"widely":[7],"distributed":[8],"protein":[9,70,110,185],"families":[10],"playing":[11],"major":[12],"role":[13],"in":[14,28],"localization":[15],"and":[16,90,128,152,181],"membrane":[17],"receptor":[18],"clustering.":[19],"They":[20],"are":[21],"hence":[22],"important":[23],"regulators":[24],"signal":[26],"transduction":[27],"cellular":[29],"pathways.":[30],"Although":[31],"knowledge":[32],"on":[33,68,83,94,136],"these":[34],"has":[36,98],"increased":[37],"exponentially,":[38],"existing":[40],"database":[41,148,177],"'PDZBase'":[42],"is":[43,188,193],"limited":[44],"by":[45,161],"presence":[46],"only":[48],"339":[49],"as":[51],"it":[52,132,166],"dates":[53],"back":[54],"to":[55,74,174,182],"2004":[56],"when":[57],"very":[58],"little":[59],"data":[60],"was":[61],"available.":[62],"Thus,":[63],"lack":[64],"exclusive":[66],"information":[67,82,135],"this":[69,147],"family":[71],"led":[72],"us":[73],"develop":[75],"PDZscape.":[76],"'PDZscape'":[77],"encompasses":[78,149],"complete":[80],"available":[81,195],"58,648":[84],"with":[87,108,155],"their":[88],"known":[89],"putative":[91],"binding":[92],"partners":[93],"platform.":[96],"It":[97,170],"a":[99,167,189],"user-friendly":[100],"web":[101],"interface":[102],"that":[103],"can":[104],"be":[105],"easily":[106],"queried":[107],"external":[109],"identifiers.":[111],"With":[112],"unique":[113],"integration":[114],"prominent":[116],"databases":[117],"including":[118],"NCBI,":[119],"UniProtKB,":[120],"Swiss-Prot,":[121],"Pubmed,":[122],"PDB,":[123],"STRING,":[124],"IntAct,":[125],"KEGG,":[126],"Pfam":[127],"Protein":[129],"Mutant":[130],"Database,":[131],"provides":[133],"detailed":[134],"PDZ":[137,156],"interactome":[138],"apart":[139],"from":[140],"customized":[142],"BLAST":[143],"option.":[144],"Most":[145],"importantly,":[146],"mutations":[151],"diseases":[153],"associated":[154],"containing":[157],"manually":[159],"curated":[160],"our":[162],"group,":[163],"thus":[164],"making":[165],"comprehensive":[168],"compilation.":[169],"also":[171],"features":[172],"tools":[173],"query":[175],"using":[178],"sequence":[179],"(PDZ-Blast)":[180],"find":[183],"if":[184],"interest":[187],"PDZ-binding":[190],"protein.":[191],"PDZscape":[192],"freely":[194],"at":[196],"http://www.actrec.gov.in:8080/pdzscape":[197],".":[198]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
