{"id":"https://openalex.org/W2803507683","doi":"https://doi.org/10.1186/s12859-018-2153-y","title":"SPIDR: small-molecule peptide-influenced drug repurposing","display_name":"SPIDR: small-molecule peptide-influenced drug repurposing","publication_year":2018,"publication_date":"2018-04-16","ids":{"openalex":"https://openalex.org/W2803507683","doi":"https://doi.org/10.1186/s12859-018-2153-y","mag":"2803507683","pmid":"https://pubmed.ncbi.nlm.nih.gov/29661129"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-018-2153-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2153-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2153-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2153-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101834729","display_name":"Matthew D. King","orcid":"https://orcid.org/0000-0003-1011-3108"},"institutions":[{"id":"https://openalex.org/I120156002","display_name":"Boise State University","ror":"https://ror.org/02e3zdp86","country_code":"US","type":"education","lineage":["https://openalex.org/I120156002"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Matthew D. King","raw_affiliation_strings":["Department of Chemistry and Biochemistry, Boise State University, Boise, USA"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry and Biochemistry, Boise State University, Boise, USA","institution_ids":["https://openalex.org/I120156002"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045028961","display_name":"Thomas Long","orcid":null},"institutions":[{"id":"https://openalex.org/I120156002","display_name":"Boise State University","ror":"https://ror.org/02e3zdp86","country_code":"US","type":"education","lineage":["https://openalex.org/I120156002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas Long","raw_affiliation_strings":["Department of Computer Science, Boise State University, Boise, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Boise State University, Boise, USA","institution_ids":["https://openalex.org/I120156002"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051961086","display_name":"Daniel L. Pfalmer","orcid":null},"institutions":[{"id":"https://openalex.org/I120156002","display_name":"Boise State University","ror":"https://ror.org/02e3zdp86","country_code":"US","type":"education","lineage":["https://openalex.org/I120156002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel L. Pfalmer","raw_affiliation_strings":["Biomolecular Sciences Ph.D. Program, Boise State University, Boise, USA"],"affiliations":[{"raw_affiliation_string":"Biomolecular Sciences Ph.D. Program, Boise State University, Boise, USA","institution_ids":["https://openalex.org/I120156002"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007449362","display_name":"Tim Andersen","orcid":"https://orcid.org/0000-0002-0279-2422"},"institutions":[{"id":"https://openalex.org/I120156002","display_name":"Boise State University","ror":"https://ror.org/02e3zdp86","country_code":"US","type":"education","lineage":["https://openalex.org/I120156002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Timothy L. Andersen","raw_affiliation_strings":["Department of Computer Science, Boise State University, Boise, USA"],"affiliations":[{"raw_affiliation_string":"Department of Computer Science, Boise State University, Boise, USA","institution_ids":["https://openalex.org/I120156002"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050447663","display_name":"Owen M. McDougal","orcid":"https://orcid.org/0000-0002-1502-3462"},"institutions":[{"id":"https://openalex.org/I120156002","display_name":"Boise State University","ror":"https://ror.org/02e3zdp86","country_code":"US","type":"education","lineage":["https://openalex.org/I120156002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Owen M. McDougal","raw_affiliation_strings":["Department of Chemistry and Biochemistry, Boise State University, Boise, USA. owenmcdougal@boisestate.edu","Department of Chemistry and Biochemistry, Boise State University, Boise, USA"],"affiliations":[{"raw_affiliation_string":"Department of Chemistry and Biochemistry, Boise State University, Boise, USA. owenmcdougal@boisestate.edu","institution_ids":[]},{"raw_affiliation_string":"Department of Chemistry and Biochemistry, Boise State University, Boise, USA","institution_ids":["https://openalex.org/I120156002"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101834729"],"corresponding_institution_ids":["https://openalex.org/I120156002"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.3511,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.89843194,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"19","issue":"1","first_page":"138","last_page":"138"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10911","display_name":"Chemical Synthesis and Analysis","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11178","display_name":"Receptor Mechanisms and Signaling","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drug-repositioning","display_name":"Drug repositioning","score":0.6664316654205322},{"id":"https://openalex.org/keywords/peptide","display_name":"Peptide","score":0.6405919194221497},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5593871474266052},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.5398094058036804},{"id":"https://openalex.org/keywords/small-molecule","display_name":"Small molecule","score":0.49698594212532043},{"id":"https://openalex.org/keywords/pharmacophore","display_name":"Pharmacophore","score":0.43603190779685974},{"id":"https://openalex.org/keywords/drug-development","display_name":"Drug development","score":0.41492849588394165},{"id":"https://openalex.org/keywords/drug","display_name":"Drug","score":0.40920767188072205},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.3724876046180725},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.36297428607940674},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2772126793861389},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.25159794092178345},{"id":"https://openalex.org/keywords/pharmacology","display_name":"Pharmacology","score":0.22128212451934814}],"concepts":[{"id":"https://openalex.org/C103637391","wikidata":"https://www.wikidata.org/wiki/Q5308921","display_name":"Drug repositioning","level":3,"score":0.6664316654205322},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.6405919194221497},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5593871474266052},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.5398094058036804},{"id":"https://openalex.org/C161624437","wikidata":"https://www.wikidata.org/wiki/Q1988322","display_name":"Small molecule","level":2,"score":0.49698594212532043},{"id":"https://openalex.org/C56173144","wikidata":"https://www.wikidata.org/wiki/Q1539893","display_name":"Pharmacophore","level":2,"score":0.43603190779685974},{"id":"https://openalex.org/C64903051","wikidata":"https://www.wikidata.org/wiki/Q2198549","display_name":"Drug development","level":3,"score":0.41492849588394165},{"id":"https://openalex.org/C2780035454","wikidata":"https://www.wikidata.org/wiki/Q8386","display_name":"Drug","level":2,"score":0.40920767188072205},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.3724876046180725},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.36297428607940674},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2772126793861389},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.25159794092178345},{"id":"https://openalex.org/C98274493","wikidata":"https://www.wikidata.org/wiki/Q128406","display_name":"Pharmacology","level":1,"score":0.22128212451934814}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008968","descriptor_name":"Molecular Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011978","descriptor_name":"Receptors, Nicotinic","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011978","descriptor_name":"Receptors, Nicotinic","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011978","descriptor_name":"Receptors, Nicotinic","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011978","descriptor_name":"Receptors, Nicotinic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011978","descriptor_name":"Receptors, Nicotinic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011978","descriptor_name":"Receptors, Nicotinic","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020916","descriptor_name":"Conotoxins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020916","descriptor_name":"Conotoxins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020916","descriptor_name":"Conotoxins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020916","descriptor_name":"Conotoxins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020916","descriptor_name":"Conotoxins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020916","descriptor_name":"Conotoxins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D054852","descriptor_name":"Small Molecule Libraries","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D054852","descriptor_name":"Small Molecule Libraries","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D054852","descriptor_name":"Small Molecule Libraries","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058492","descriptor_name":"Drug Repositioning","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":8,"locations":[{"id":"doi:10.1186/s12859-018-2153-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2153-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2153-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29661129","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29661129","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:scholarworks.boisestate.edu:chem_facpubs-1116","is_oa":true,"landing_page_url":"https://scholarworks.boisestate.edu/chem_facpubs/117","pdf_url":null,"source":{"id":"https://openalex.org/S4377196366","display_name":"Scholar Works  (Boise State University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I120156002","host_organization_name":"Boise State University","host_organization_lineage":["https://openalex.org/I120156002"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Chemistry Faculty Publications and Presentations","raw_type":"text"},{"id":"pmh:oai:doaj.org/article:45ba5aa17c5d41298f9ee12873d3c712","is_oa":true,"landing_page_url":"https://doaj.org/article/45ba5aa17c5d41298f9ee12873d3c712","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 19, Iss 1, Pp 1-11 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:4837245","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC5902895","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:osti.gov:1618532","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1618532","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:osti.gov:1626768","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1626768","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5902895","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5902895","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-018-2153-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2153-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2153-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1065316766","display_name":null,"funder_award_id":"Award","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G1072663433","display_name":null,"funder_award_id":"0923535","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G1219390414","display_name":null,"funder_award_id":"P20GM109095","funder_id":"https://openalex.org/F4320306203","funder_display_name":"M.J. Murdock Charitable Trust"},{"id":"https://openalex.org/G1260581288","display_name":null,"funder_award_id":"P20GM103408","funder_id":"https://openalex.org/F4320306203","funder_display_name":"M.J. Murdock Charitable Trust"},{"id":"https://openalex.org/G1807241915","display_name":null,"funder_award_id":"P20GM109095","funder_id":"https://openalex.org/F4320309625","funder_display_name":"Boise State University"},{"id":"https://openalex.org/G1856142252","display_name":null,"funder_award_id":"DE-AC07-05ID14517","funder_id":"https://openalex.org/F4320309625","funder_display_name":"Boise State University"},{"id":"https://openalex.org/G2401603855","display_name":null,"funder_award_id":"#P20GM103408","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3196004359","display_name":null,"funder_award_id":"#0923535","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3238773084","display_name":null,"funder_award_id":"P20GM10909","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G3265997201","display_name":null,"funder_award_id":"20GM103408","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3362351903","display_name":null,"funder_award_id":"GM103408","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G3599619881","display_name":null,"funder_award_id":"P20GM103408","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G3672243547","display_name":null,"funder_award_id":"0923535","funder_id":"https://openalex.org/F4320335353","funder_display_name":"National Science Foundation of Sri Lanka"},{"id":"https://openalex.org/G4072255364","display_name":null,"funder_award_id":"-AC07-05ID14517","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G4083741887","display_name":null,"funder_award_id":"P20GM109095","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4370315139","display_name":null,"funder_award_id":"0923535","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4518677568","display_name":null,"funder_award_id":"P20GM10909","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4692122550","display_name":null,"funder_award_id":"DE-AC07-05ID14517","funder_id":"https://openalex.org/F4320332364","funder_display_name":"Office of Nuclear Energy"},{"id":"https://openalex.org/G4844227136","display_name":null,"funder_award_id":"P20GM109095","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5339432235","display_name":null,"funder_award_id":"0619793","funder_id":"https://openalex.org/F4320335353","funder_display_name":"National Science Foundation of Sri Lanka"},{"id":"https://openalex.org/G5436868630","display_name":null,"funder_award_id":"P20GM103408 and P20GM109095","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5508821569","display_name":null,"funder_award_id":"0619793","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5775933103","display_name":null,"funder_award_id":"P20GM103408 and P20GM109095","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G5917383049","display_name":null,"funder_award_id":"0619793","funder_id":"https://openalex.org/F4320306203","funder_display_name":"M.J. Murdock Charitable Trust"},{"id":"https://openalex.org/G5918565969","display_name":null,"funder_award_id":"GM109095","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5938308449","display_name":null,"funder_award_id":"0619793","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G6068872038","display_name":null,"funder_award_id":"20GM103408","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G6293982872","display_name":null,"funder_award_id":"DE-AC07-05ID14517","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G662644597","display_name":null,"funder_award_id":"P20GM109095","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G6687630329","display_name":null,"funder_award_id":"GM103408","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G6731173656","display_name":null,"funder_award_id":"Contract No. DE-AC07-05ID14517","funder_id":"https://openalex.org/F4320332364","funder_display_name":"Office of Nuclear Energy"},{"id":"https://openalex.org/G6757593912","display_name":null,"funder_award_id":"AC07-05ID14517","funder_id":"https://openalex.org/F4320332364","funder_display_name":"Office of Nuclear Energy"},{"id":"https://openalex.org/G6774565858","display_name":null,"funder_award_id":"#P20GM103408","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7108482798","display_name":null,"funder_award_id":"AC07-05ID14517","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G7702513433","display_name":null,"funder_award_id":"0923535","funder_id":"https://openalex.org/F4320306203","funder_display_name":"M.J. Murdock Charitable Trust"},{"id":"https://openalex.org/G8083102032","display_name":null,"funder_award_id":"0923535","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G8414908677","display_name":null,"funder_award_id":"DE-AC0","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G848032724","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G8944282817","display_name":null,"funder_award_id":"DE-AC07-05ID1451","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320306203","display_name":"M.J. Murdock Charitable Trust","ror":"https://ror.org/02hxgd925"},{"id":"https://openalex.org/F4320306487","display_name":"Research Corporation for Science Advancement","ror":"https://ror.org/00jp8d455"},{"id":"https://openalex.org/F4320309625","display_name":"Boise State University","ror":"https://ror.org/02e3zdp86"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332364","display_name":"Office of Nuclear Energy","ror":"https://ror.org/05tj7dm33"},{"id":"https://openalex.org/F4320335353","display_name":"National Science Foundation of Sri Lanka","ror":"https://ror.org/010xaa060"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2803507683.pdf","grobid_xml":"https://content.openalex.org/works/W2803507683.grobid-xml"},"referenced_works_count":57,"referenced_works":["https://openalex.org/W1560891849","https://openalex.org/W1757046366","https://openalex.org/W1884123732","https://openalex.org/W1889517434","https://openalex.org/W1976892175","https://openalex.org/W1977062831","https://openalex.org/W1982597534","https://openalex.org/W1984084871","https://openalex.org/W1985588649","https://openalex.org/W1987730034","https://openalex.org/W1990399577","https://openalex.org/W1993004568","https://openalex.org/W2012746420","https://openalex.org/W2014858249","https://openalex.org/W2016574472","https://openalex.org/W2020530495","https://openalex.org/W2036173433","https://openalex.org/W2059495695","https://openalex.org/W2059824750","https://openalex.org/W2062941476","https://openalex.org/W2065283382","https://openalex.org/W2080368522","https://openalex.org/W2083258699","https://openalex.org/W2091582185","https://openalex.org/W2096541451","https://openalex.org/W2096864392","https://openalex.org/W2097345469","https://openalex.org/W2103311408","https://openalex.org/W2113245544","https://openalex.org/W2121365620","https://openalex.org/W2123179625","https://openalex.org/W2126829020","https://openalex.org/W2133552860","https://openalex.org/W2143014450","https://openalex.org/W2144879169","https://openalex.org/W2149679250","https://openalex.org/W2158534713","https://openalex.org/W2165526004","https://openalex.org/W2165998358","https://openalex.org/W2169817478","https://openalex.org/W2170146596","https://openalex.org/W2170715446","https://openalex.org/W2177317049","https://openalex.org/W2273267066","https://openalex.org/W2279500636","https://openalex.org/W2295332248","https://openalex.org/W2295730657","https://openalex.org/W2551539687","https://openalex.org/W2593436234","https://openalex.org/W2599126941","https://openalex.org/W2601953349","https://openalex.org/W2739999456","https://openalex.org/W2751214316","https://openalex.org/W2980243618","https://openalex.org/W4233925078","https://openalex.org/W4405989070","https://openalex.org/W6735358564"],"related_works":["https://openalex.org/W4288690660","https://openalex.org/W2951512731","https://openalex.org/W4312078611","https://openalex.org/W2043558654","https://openalex.org/W3175975129","https://openalex.org/W4291511859","https://openalex.org/W4386306110","https://openalex.org/W4225792090","https://openalex.org/W2090863707","https://openalex.org/W1963666259"],"abstract_inverted_index":{"SPIDR":[0],"has":[1],"been":[2],"generalized":[3],"and":[4,22,26,42],"integrated":[5],"into":[6],"DockoMatic":[7,33],"v":[8],"2.1.":[9],"This":[10],"software":[11],"contains":[12],"an":[13],"intuitive":[14],"graphical":[15],"interface":[16],"for":[17,37],"peptide":[18],"mutant":[19],"screening":[20],"workflow":[21],"facilitates":[23],"mapping,":[24],"clustering,":[25],"searching":[27],"of":[28],"local":[29],"molecular":[30],"databases,":[31],"making":[32],"a":[34],"valuable":[35],"tool":[36],"researchers":[38],"in":[39],"drug":[40],"design":[41],"repurposing.":[43]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":5},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":1}],"updated_date":"2026-04-18T07:56:08.524223","created_date":"2025-10-10T00:00:00"}
