{"id":"https://openalex.org/W2800915484","doi":"https://doi.org/10.1186/s12859-018-2064-y","title":"A new method to measure the semantic similarity from query phenotypic abnormalities to diseases based on the human phenotype ontology","display_name":"A new method to measure the semantic similarity from query phenotypic abnormalities to diseases based on the human phenotype ontology","publication_year":2018,"publication_date":"2018-05-01","ids":{"openalex":"https://openalex.org/W2800915484","doi":"https://doi.org/10.1186/s12859-018-2064-y","mag":"2800915484","pmid":"https://pubmed.ncbi.nlm.nih.gov/29745853"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-018-2064-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2064-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2064-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2064-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5049975167","display_name":"Xiao\u2010Feng Gong","orcid":"https://orcid.org/0000-0001-8360-8107"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaofeng Gong","raw_affiliation_strings":["Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021957889","display_name":"Jianping Jiang","orcid":"https://orcid.org/0000-0002-1066-6362"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianping Jiang","raw_affiliation_strings":["Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012969475","display_name":"Zhongqu Duan","orcid":"https://orcid.org/0000-0001-7281-5346"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhongqu Duan","raw_affiliation_strings":["Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100716955","display_name":"Hui L\u00fc","orcid":"https://orcid.org/0000-0001-8347-0830"},"institutions":[{"id":"https://openalex.org/I183067930","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04","country_code":"CN","type":"education","lineage":["https://openalex.org/I183067930"]},{"id":"https://openalex.org/I4210162648","display_name":"Shanghai Center For Bioinformation Technology","ror":"https://ror.org/04nyf1f54","country_code":"CN","type":"facility","lineage":["https://openalex.org/I4210162648"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hui Lu","raw_affiliation_strings":["Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China. huilu@sjtu.edu.cn","Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China. huilu@sjtu.edu.cn","institution_ids":["https://openalex.org/I4210162648"]},{"raw_affiliation_string":"Department of Bioinformatics and Biostatistics, SJTU-Yale Joint Center for Biostatistics, Shanghai Jiao Tong University, Shanghai, China","institution_ids":["https://openalex.org/I183067930"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.4337,"has_fulltext":true,"cited_by_count":15,"citation_normalized_percentile":{"value":0.83272241,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"19","issue":"S4","first_page":"162","last_page":"162"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9678000211715698,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9678000211715698,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.026399999856948853,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.0017000000225380063,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7079142928123474},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.661726713180542},{"id":"https://openalex.org/keywords/noise","display_name":"Noise (video)","score":0.639008641242981},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5814465284347534},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5659922957420349},{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.5557079315185547},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5245447754859924},{"id":"https://openalex.org/keywords/measure","display_name":"Measure (data warehouse)","score":0.49121612310409546},{"id":"https://openalex.org/keywords/rank","display_name":"Rank (graph theory)","score":0.4718461036682129},{"id":"https://openalex.org/keywords/ranking","display_name":"Ranking (information retrieval)","score":0.42927631735801697},{"id":"https://openalex.org/keywords/similarity-measure","display_name":"Similarity measure","score":0.42504510283470154},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.42151159048080444},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.3933297395706177},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.33280256390571594},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.1488761007785797}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7079142928123474},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.661726713180542},{"id":"https://openalex.org/C99498987","wikidata":"https://www.wikidata.org/wiki/Q2210247","display_name":"Noise (video)","level":3,"score":0.639008641242981},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5814465284347534},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5659922957420349},{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.5557079315185547},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5245447754859924},{"id":"https://openalex.org/C2780009758","wikidata":"https://www.wikidata.org/wiki/Q6804172","display_name":"Measure (data warehouse)","level":2,"score":0.49121612310409546},{"id":"https://openalex.org/C164226766","wikidata":"https://www.wikidata.org/wiki/Q7293202","display_name":"Rank (graph theory)","level":2,"score":0.4718461036682129},{"id":"https://openalex.org/C189430467","wikidata":"https://www.wikidata.org/wiki/Q7293293","display_name":"Ranking (information retrieval)","level":2,"score":0.42927631735801697},{"id":"https://openalex.org/C2776517306","wikidata":"https://www.wikidata.org/wiki/Q29017317","display_name":"Similarity measure","level":2,"score":0.42504510283470154},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.42151159048080444},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.3933297395706177},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.33280256390571594},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.1488761007785797},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C114614502","wikidata":"https://www.wikidata.org/wiki/Q76592","display_name":"Combinatorics","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019992","descriptor_name":"Databases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019992","descriptor_name":"Databases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019992","descriptor_name":"Databases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-018-2064-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2064-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2064-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29745853","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29745853","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:cd83fb6f4e984ef882c88e345c5280ce","is_oa":true,"landing_page_url":"https://doaj.org/article/cd83fb6f4e984ef882c88e345c5280ce","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 19, Iss S4, Pp 111-119 (2018)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:4965286","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC5998886","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:5998886","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5998886","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-018-2064-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2064-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2064-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320308380","display_name":"Yale University","ror":"https://ror.org/03v76x132"},{"id":"https://openalex.org/F4320322999","display_name":"Shanghai Jiao Tong University","ror":"https://ror.org/0220qvk04"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2800915484.pdf","grobid_xml":"https://content.openalex.org/works/W2800915484.grobid-xml"},"referenced_works_count":29,"referenced_works":["https://openalex.org/W1495712943","https://openalex.org/W1547875771","https://openalex.org/W1647729745","https://openalex.org/W1961827049","https://openalex.org/W1965364342","https://openalex.org/W2006233587","https://openalex.org/W2012361142","https://openalex.org/W2059313072","https://openalex.org/W2069303969","https://openalex.org/W2080770151","https://openalex.org/W2089903000","https://openalex.org/W2094500541","https://openalex.org/W2100935296","https://openalex.org/W2104008606","https://openalex.org/W2105290783","https://openalex.org/W2119412782","https://openalex.org/W2121343862","https://openalex.org/W2127006085","https://openalex.org/W2128049108","https://openalex.org/W2136410628","https://openalex.org/W2170282111","https://openalex.org/W2246559112","https://openalex.org/W2269037521","https://openalex.org/W2410525650","https://openalex.org/W2557385283","https://openalex.org/W2575171872","https://openalex.org/W2608239929","https://openalex.org/W2950225692","https://openalex.org/W2953332543"],"related_works":["https://openalex.org/W2003333417","https://openalex.org/W2188500270","https://openalex.org/W2303858293","https://openalex.org/W2152992791","https://openalex.org/W2915512527","https://openalex.org/W2798198862","https://openalex.org/W51364034","https://openalex.org/W2798997222","https://openalex.org/W2378862226","https://openalex.org/W3160516639"],"abstract_inverted_index":{"BACKGROUND:":[0],"Although":[1],"rapid":[2],"developed":[3],"sequencing":[4,29],"technologies":[5],"make":[6,31,142],"it":[7,18,242],"possible":[8],"for":[9,22],"genotype":[10],"data":[11],"to":[12,24,68,85,92,129,141,222,225],"be":[13,223,260,265],"used":[14,140],"in":[15,214,233,249,269],"clinical":[16,42,131,270],"diagnosis,":[17],"is":[19],"still":[20],"challenging":[21],"clinicians":[23],"understand":[25],"the":[26,49,52,58,69,89,101,106,154,163,172,182,193,204,234,250],"results":[27],"of":[28,51,60,71,112,162,171,181,192,266],"and":[30,57,98,146,168,177,187,190,199,227,239,256],"correct":[32],"judgement":[33],"based":[34,40,95,114],"on":[35,41,96,115,160],"them.":[36],"Before":[37],"this,":[38],"diagnosis":[39],"features":[43],"held":[44],"a":[45,80,110],"leading":[46],"position.":[47],"With":[48],"establishment":[50],"Human":[53],"Phenotype":[54],"Ontology":[55],"(HPO)":[56],"enrichment":[59],"phenotype-disease":[61],"annotations,":[62],"there":[63],"throws":[64],"much":[65],"more":[66],"attention":[67],"improvement":[70],"phenotype-based":[72],"diagnosis.":[73],"RESULTS:":[74],"In":[75],"this":[76],"study,":[77],"we":[78,108],"presented":[79],"novel":[81],"method":[82],"called":[83],"RelativeBestPair":[84,145,152,210,220,263],"measure":[86],"similarity":[87,150,208],"from":[88],"query":[90],"terms":[91],"hereditary":[93],"diseases":[94],"HPO":[97],"then":[99],"rank":[100],"candidate":[102],"diseases.":[103,118],"To":[104],"evaluate":[105],"performance,":[107],"simulated":[109,137,164,173,183,194,235,251],"set":[111],"patients":[113],"44":[116],"complex":[117],"Besides,":[119],"by":[120],"adding":[121],"noise":[122,167,176,186,198,238,255],"or":[123,125],"imprecision":[124],"both,":[126],"cases":[127],"closer":[128],"real":[130],"conditions":[132],"were":[133,139],"generated.":[134],"Thus,":[135],"four":[136],"datasets":[138,216],"comparison":[143],"among":[144],"seven":[147,205,247],"existing":[148,206],"semantic":[149,207],"measures.":[151],"ranked":[153],"underlying":[155],"disease":[156],"as":[157],"top":[158],"1":[159],"93.73%":[161],"dataset":[165,174,184,195,236,252],"without":[166,178,185,217,237],"imprecision,":[169,179,189,241],"93.64%":[170],"with":[175,188,196,203,240,253],"39.82%":[180],"33.64%":[191],"both":[197,254],"imprecision.":[200,218,257],"CONCLUSION:":[201],"Compared":[202],"measures,":[209],"showed":[211],"similar":[212],"performance":[213],"two":[215],"While":[219],"appeared":[221],"equal":[224],"Resnik":[226],"better":[228],"than":[229],"other":[230,246],"six":[231],"methods":[232,248],"significantly":[243],"outperformed":[244],"all":[245],"It":[258],"can":[259],"indicated":[261],"that":[262],"might":[264],"great":[267],"help":[268],"setting.":[271]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":4},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":5}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}
