{"id":"https://openalex.org/W2788592718","doi":"https://doi.org/10.1186/s12859-018-2052-2","title":"StructRNAfinder: an automated pipeline and web server for RNA families prediction","display_name":"StructRNAfinder: an automated pipeline and web server for RNA families prediction","publication_year":2018,"publication_date":"2018-02-16","ids":{"openalex":"https://openalex.org/W2788592718","doi":"https://doi.org/10.1186/s12859-018-2052-2","mag":"2788592718","pmid":"https://pubmed.ncbi.nlm.nih.gov/29454313"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-018-2052-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2052-2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2052-2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2052-2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030024244","display_name":"Ra\u00fal Arias\u2010Carrasco","orcid":"https://orcid.org/0000-0003-1698-9282"},"institutions":[{"id":"https://openalex.org/I116419501","display_name":"Universidad Mayor","ror":"https://ror.org/00pn44t17","country_code":"CL","type":"education","lineage":["https://openalex.org/I116419501"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Ra\u00fal Arias-Carrasco","raw_affiliation_strings":["Centro de Gen\u00f3mica y Bioinform\u00e1tica, Facultad de Ciencias, Universidad Mayor, 8580745, Santiago, Chile","Programa de Doctorado en Gen\u00f3mica Integrativa, Vicerrector\u00eda de Investigaci\u00f3n, Universidad Mayor, 8580745, Santiago, Chile"],"affiliations":[{"raw_affiliation_string":"Centro de Gen\u00f3mica y Bioinform\u00e1tica, Facultad de Ciencias, Universidad Mayor, 8580745, Santiago, Chile","institution_ids":["https://openalex.org/I116419501"]},{"raw_affiliation_string":"Programa de Doctorado en Gen\u00f3mica Integrativa, Vicerrector\u00eda de Investigaci\u00f3n, Universidad Mayor, 8580745, Santiago, Chile","institution_ids":["https://openalex.org/I116419501"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088283026","display_name":"Yessenia V\u00e1squez-Mor\u00e1n","orcid":null},"institutions":[{"id":"https://openalex.org/I116419501","display_name":"Universidad Mayor","ror":"https://ror.org/00pn44t17","country_code":"CL","type":"education","lineage":["https://openalex.org/I116419501"]}],"countries":["CL"],"is_corresponding":false,"raw_author_name":"Yessenia V\u00e1squez-Mor\u00e1n","raw_affiliation_strings":["Centro de Gen\u00f3mica y Bioinform\u00e1tica, Facultad de Ciencias, Universidad Mayor, 8580745, Santiago, Chile"],"affiliations":[{"raw_affiliation_string":"Centro de Gen\u00f3mica y Bioinform\u00e1tica, Facultad de Ciencias, Universidad Mayor, 8580745, Santiago, Chile","institution_ids":["https://openalex.org/I116419501"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022539185","display_name":"Helder I. Nakaya","orcid":"https://orcid.org/0000-0001-5297-9108"},"institutions":[{"id":"https://openalex.org/I17974374","display_name":"Universidade de S\u00e3o Paulo","ror":"https://ror.org/036rp1748","country_code":"BR","type":"education","lineage":["https://openalex.org/I17974374"]},{"id":"https://openalex.org/I4210131245","display_name":"Instituto de Ci\u00eancias Farmac\u00eauticas","ror":"https://ror.org/02k3jph89","country_code":"BR","type":"facility","lineage":["https://openalex.org/I4210131245"]}],"countries":["BR"],"is_corresponding":true,"raw_author_name":"Helder I. Nakaya","raw_affiliation_strings":["Faculdade de Ci\u00eancias Farmac\u00eauticas, Universidade de S\u00e3o Paulo, S\u00e3o Paulo, 05508-900, Brazil. hnakaya@usp.br","Faculdade de Ci\u00eancias Farmac\u00eauticas, Universidade de S\u00e3o Paulo, S\u00e3o Paulo, 05508-900, Brazil"],"affiliations":[{"raw_affiliation_string":"Faculdade de Ci\u00eancias Farmac\u00eauticas, Universidade de S\u00e3o Paulo, S\u00e3o Paulo, 05508-900, Brazil. hnakaya@usp.br","institution_ids":["https://openalex.org/I4210131245"]},{"raw_affiliation_string":"Faculdade de Ci\u00eancias Farmac\u00eauticas, Universidade de S\u00e3o Paulo, S\u00e3o Paulo, 05508-900, Brazil","institution_ids":["https://openalex.org/I17974374"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5013987962","display_name":"Vinicius Maracaja\u2010Coutinho","orcid":"https://orcid.org/0000-0002-8873-9381"},"institutions":[{"id":"https://openalex.org/I116419501","display_name":"Universidad Mayor","ror":"https://ror.org/00pn44t17","country_code":"CL","type":"education","lineage":["https://openalex.org/I116419501"]},{"id":"https://openalex.org/I4210131520","display_name":"Advanced Center for Chronic Diseases","ror":"https://ror.org/036mwh061","country_code":"CL","type":"facility","lineage":["https://openalex.org/I4210131520"]},{"id":"https://openalex.org/I4210158946","display_name":"Centro Universit\u00e1rio de Jo\u00e3o Pessoa","ror":"https://ror.org/04pnqcx66","country_code":"BR","type":"education","lineage":["https://openalex.org/I4210158946"]},{"id":"https://openalex.org/I4210167034","display_name":"Millennium Institute for Integrative Biology","ror":"https://ror.org/05xcmte05","country_code":"CL","type":"other","lineage":["https://openalex.org/I4210167034"]}],"countries":["BR","CL"],"is_corresponding":true,"raw_author_name":"Vinicius Maracaja-Coutinho","raw_affiliation_strings":["Advanced Center for Chronic Diseases (ACCDiS), Facultad de Ciencias Qu\u00edmicas y Farmac\u00e9uticas, Universidad de Chile, 8380492, Santiago, Chile. viniciusmaracaja@integrativebioinformatics.me","Beagle Bioinformatics, 8320000, Santiago, Chile. viniciusmaracaja@integrativebioinformatics.me","Centro de Gen\u00f3mica y Bioinform\u00e1tica, Facultad de Ciencias, Universidad Mayor, 8580745, Santiago, Chile. viniciusmaracaja@integrativebioinformatics.me","Instituto Vandique, Jo\u00e3o Pessoa, 58000-000, Brazil. viniciusmaracaja@integrativebioinformatics.me","Instituto Vandique, Jo\u00e3o Pessoa, 58000-000, Brazil"],"affiliations":[{"raw_affiliation_string":"Advanced Center for Chronic Diseases (ACCDiS), Facultad de Ciencias Qu\u00edmicas y Farmac\u00e9uticas, Universidad de Chile, 8380492, Santiago, Chile. viniciusmaracaja@integrativebioinformatics.me","institution_ids":["https://openalex.org/I4210131520"]},{"raw_affiliation_string":"Beagle Bioinformatics, 8320000, Santiago, Chile. viniciusmaracaja@integrativebioinformatics.me","institution_ids":["https://openalex.org/I4210167034"]},{"raw_affiliation_string":"Centro de Gen\u00f3mica y Bioinform\u00e1tica, Facultad de Ciencias, Universidad Mayor, 8580745, Santiago, Chile. viniciusmaracaja@integrativebioinformatics.me","institution_ids":["https://openalex.org/I116419501"]},{"raw_affiliation_string":"Instituto Vandique, Jo\u00e3o Pessoa, 58000-000, Brazil. viniciusmaracaja@integrativebioinformatics.me","institution_ids":["https://openalex.org/I4210158946"]},{"raw_affiliation_string":"Instituto Vandique, Jo\u00e3o Pessoa, 58000-000, Brazil","institution_ids":["https://openalex.org/I4210158946"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5013987962","https://openalex.org/A5022539185"],"corresponding_institution_ids":["https://openalex.org/I116419501","https://openalex.org/I17974374","https://openalex.org/I4210131245","https://openalex.org/I4210131520","https://openalex.org/I4210158946","https://openalex.org/I4210167034"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.8617,"has_fulltext":true,"cited_by_count":60,"citation_normalized_percentile":{"value":0.85771,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"19","issue":"1","first_page":"55","last_page":"55"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7311292886734009},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.7216769456863403},{"id":"https://openalex.org/keywords/pipeline","display_name":"Pipeline (software)","score":0.6757240891456604},{"id":"https://openalex.org/keywords/workflow","display_name":"Workflow","score":0.6285881996154785},{"id":"https://openalex.org/keywords/parsing","display_name":"Parsing","score":0.4753665328025818},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.4653630554676056},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3880390524864197},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37829065322875977},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.369728147983551},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3456406593322754},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.27307242155075073},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.1933240294456482},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.17124667763710022},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11247271299362183}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7311292886734009},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.7216769456863403},{"id":"https://openalex.org/C43521106","wikidata":"https://www.wikidata.org/wiki/Q2165493","display_name":"Pipeline (software)","level":2,"score":0.6757240891456604},{"id":"https://openalex.org/C177212765","wikidata":"https://www.wikidata.org/wiki/Q627335","display_name":"Workflow","level":2,"score":0.6285881996154785},{"id":"https://openalex.org/C186644900","wikidata":"https://www.wikidata.org/wiki/Q194152","display_name":"Parsing","level":2,"score":0.4753665328025818},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.4653630554676056},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3880390524864197},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37829065322875977},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.369728147983551},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3456406593322754},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.27307242155075073},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.1933240294456482},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.17124667763710022},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11247271299362183}],"mesh":[{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001331","descriptor_name":"Automation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057188","descriptor_name":"Workflow","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1186/s12859-018-2052-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2052-2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2052-2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:29454313","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/29454313","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:www.producao.usp.br:BDPI/51527","is_oa":true,"landing_page_url":"http://www.producao.usp.br/handle/BDPI/51527","pdf_url":null,"source":{"id":"https://openalex.org/S4306401373","display_name":"Scientific Electronic Library Online (S\u00e3o Paulo Research Foundation, Latin American and Caribbean Center on Health Sciences Information, Conselho Nacional de Desenvolvimento Cient\u00edfico e Tecnol\u00f3gico)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2982035970","host_organization_name":"Costa Rican Department of Social Security","host_organization_lineage":["https://openalex.org/I2982035970"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"","raw_type":"article"},{"id":"pmh:002882716","is_oa":true,"landing_page_url":"http://dx.doi.org/10.1186/s12859-018-2052-2","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"reponame:Reposit\u00f3rio Institucional da USP (Biblioteca Digital da Produ\u00e7\u00e3o Intelectual)","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:doaj.org/article:20e8bcdc3d664f85b6bde53e4d3bbafc","is_oa":true,"landing_page_url":"https://doaj.org/article/20e8bcdc3d664f85b6bde53e4d3bbafc","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 19, Iss 1, Pp 1-7 (2018)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5816368","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5816368","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:repositorio.uchile.cl:2250/150462","is_oa":true,"landing_page_url":"https://repositorio.uchile.cl/handle/2250/150462","pdf_url":null,"source":{"id":"https://openalex.org/S4306481413","display_name":"Universidad de Chile","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Art\u00edculo de revista"}],"best_oa_location":{"id":"doi:10.1186/s12859-018-2052-2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-018-2052-2","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-018-2052-2","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G371153234","display_name":null,"funder_award_id":"11161020","funder_id":"https://openalex.org/F4320334812","funder_display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica"},{"id":"https://openalex.org/G551219040","display_name":null,"funder_award_id":"15130011","funder_id":"https://openalex.org/F4320334812","funder_display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica"},{"id":"https://openalex.org/G7106347480","display_name":null,"funder_award_id":"12/19278-6","funder_id":"https://openalex.org/F4320320997","funder_display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo"},{"id":"https://openalex.org/G8084381134","display_name":null,"funder_award_id":"PAI79170021","funder_id":"https://openalex.org/F4320334812","funder_display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica"},{"id":"https://openalex.org/G8595702384","display_name":null,"funder_award_id":"14-SSAF-27061-9","funder_id":"https://openalex.org/F4320311278","funder_display_name":"Corporaci\u00f3n de Fomento de la Producci\u00f3n"},{"id":"https://openalex.org/G8953982126","display_name":null,"funder_award_id":"16BPE-62321","funder_id":"https://openalex.org/F4320311278","funder_display_name":"Corporaci\u00f3n de Fomento de la Producci\u00f3n"},{"id":"https://openalex.org/G907567576","display_name":null,"funder_award_id":"Becas","funder_id":"https://openalex.org/F4320334812","funder_display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica"}],"funders":[{"id":"https://openalex.org/F4320311278","display_name":"Corporaci\u00f3n de Fomento de la Producci\u00f3n","ror":"https://ror.org/00as45r68"},{"id":"https://openalex.org/F4320320997","display_name":"Funda\u00e7\u00e3o de Amparo \u00e0 Pesquisa do Estado de S\u00e3o Paulo","ror":"https://ror.org/02ddkpn78"},{"id":"https://openalex.org/F4320334812","display_name":"Comisi\u00f3n Nacional de Investigaci\u00f3n Cient\u00edfica y Tecnol\u00f3gica","ror":"https://ror.org/02ap3w078"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2788592718.pdf","grobid_xml":"https://content.openalex.org/works/W2788592718.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1691812142","https://openalex.org/W1984471884","https://openalex.org/W2009818318","https://openalex.org/W2039244411","https://openalex.org/W2042881722","https://openalex.org/W2052785172","https://openalex.org/W2085926377","https://openalex.org/W2086561953","https://openalex.org/W2104702173","https://openalex.org/W2106144124","https://openalex.org/W2108230379","https://openalex.org/W2111741055","https://openalex.org/W2123047239","https://openalex.org/W2140302584","https://openalex.org/W2141152740","https://openalex.org/W2145628933","https://openalex.org/W2166824799","https://openalex.org/W2317878573","https://openalex.org/W2326044761","https://openalex.org/W2468840043","https://openalex.org/W2626443726","https://openalex.org/W4237070259"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2944823289","https://openalex.org/W2358755282","https://openalex.org/W3037018281","https://openalex.org/W2053943328","https://openalex.org/W3046984657"],"abstract_inverted_index":{"The":[0],"main":[1],"advantage":[2],"of":[3,24],"StructRNAfinder":[4],"relies":[5],"on":[6],"the":[7,12,22],"large-scale":[8],"processing":[9],"and":[10,18,30,39],"integrating":[11],"data":[13,40],"obtained":[14],"by":[15],"each":[16],"tool":[17],"database":[19],"employed":[20],"along":[21],"workflow,":[23],"which":[25],"several":[26],"files":[27],"are":[28],"generated":[29],"displayed":[31],"in":[32],"user-friendly":[33],"reports,":[34],"useful":[35],"for":[36],"downstream":[37],"analyses":[38],"exploration.":[41]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":9},{"year":2024,"cited_by_count":14},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
