{"id":"https://openalex.org/W2760053263","doi":"https://doi.org/10.1186/s12859-017-1846-y","title":"RiceMetaSys for salt and drought stress responsive genes in rice: a web interface for crop improvement","display_name":"RiceMetaSys for salt and drought stress responsive genes in rice: a web interface for crop improvement","publication_year":2017,"publication_date":"2017-09-30","ids":{"openalex":"https://openalex.org/W2760053263","doi":"https://doi.org/10.1186/s12859-017-1846-y","mag":"2760053263","pmid":"https://pubmed.ncbi.nlm.nih.gov/28964253"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-017-1846-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1846-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-017-1846-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-017-1846-y","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005293809","display_name":"Maninder Sandhu","orcid":null},"institutions":[{"id":"https://openalex.org/I191247993","display_name":"Shobhit University","ror":"https://ror.org/02z2sk479","country_code":"IN","type":"education","lineage":["https://openalex.org/I191247993"]},{"id":"https://openalex.org/I4210091233","display_name":"National Research Centre on Plant Biotechnology","ror":"https://ror.org/00cq3cz72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210091233"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Maninder Sandhu","raw_affiliation_strings":["ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India","Shobhit University, Modipuram, Meerut, 250110, Uttar Pradesh, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India","institution_ids":["https://openalex.org/I4210091233"]},{"raw_affiliation_string":"Shobhit University, Modipuram, Meerut, 250110, Uttar Pradesh, India","institution_ids":["https://openalex.org/I191247993"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087506155","display_name":"V. Sureshkumar","orcid":null},"institutions":[{"id":"https://openalex.org/I134900695","display_name":"Tamil Nadu Agricultural University","ror":"https://ror.org/04fs90r60","country_code":"IN","type":"education","lineage":["https://openalex.org/I134900695"]},{"id":"https://openalex.org/I4210091233","display_name":"National Research Centre on Plant Biotechnology","ror":"https://ror.org/00cq3cz72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210091233"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"V. Sureshkumar","raw_affiliation_strings":["Department of Plant Molecular Biology and Bioinformatics, Tamil Nadu Agricultural University, Coimbatore, 641003, India","ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Plant Molecular Biology and Bioinformatics, Tamil Nadu Agricultural University, Coimbatore, 641003, India","institution_ids":["https://openalex.org/I134900695"]},{"raw_affiliation_string":"ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India","institution_ids":["https://openalex.org/I4210091233"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Chandra Prakash","orcid":null},"institutions":[{"id":"https://openalex.org/I4210091233","display_name":"National Research Centre on Plant Biotechnology","ror":"https://ror.org/00cq3cz72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210091233"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Chandra Prakash","raw_affiliation_strings":["ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India","institution_ids":["https://openalex.org/I4210091233"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110589727","display_name":"Rekha Dixit","orcid":"https://orcid.org/0000-0002-2427-8643"},"institutions":[{"id":"https://openalex.org/I191247993","display_name":"Shobhit University","ror":"https://ror.org/02z2sk479","country_code":"IN","type":"education","lineage":["https://openalex.org/I191247993"]},{"id":"https://openalex.org/I2799707979","display_name":"Swami Vivekanand Subharti University","ror":"https://ror.org/053h7gw81","country_code":"IN","type":"education","lineage":["https://openalex.org/I2799707979"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Rekha Dixit","raw_affiliation_strings":["Current address: Department of biotechnology, Keralverma faculty of science, Swami Vivekanand Subharti University, Meerut, 250005, Uttar Pradesh, India","Shobhit University, Modipuram, Meerut, 250110, Uttar Pradesh, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Current address: Department of biotechnology, Keralverma faculty of science, Swami Vivekanand Subharti University, Meerut, 250005, Uttar Pradesh, India","institution_ids":["https://openalex.org/I2799707979"]},{"raw_affiliation_string":"Shobhit University, Modipuram, Meerut, 250110, Uttar Pradesh, India","institution_ids":["https://openalex.org/I191247993"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5018828292","display_name":"Amolkumar U. Solanke","orcid":"https://orcid.org/0000-0001-8567-7691"},"institutions":[{"id":"https://openalex.org/I4210091233","display_name":"National Research Centre on Plant Biotechnology","ror":"https://ror.org/00cq3cz72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210091233"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Amolkumar U. Solanke","raw_affiliation_strings":["ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India","institution_ids":["https://openalex.org/I4210091233"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109353455","display_name":"Tilak Raj Sharma","orcid":"https://orcid.org/0000-0001-6723-2330"},"institutions":[{"id":"https://openalex.org/I4210091233","display_name":"National Research Centre on Plant Biotechnology","ror":"https://ror.org/00cq3cz72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210091233"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Tilak Raj Sharma","raw_affiliation_strings":["ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India","institution_ids":["https://openalex.org/I4210091233"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010425756","display_name":"Trilochan Mohapatra","orcid":"https://orcid.org/0000-0003-2708-3080"},"institutions":[{"id":"https://openalex.org/I179420787","display_name":"Indian Council of Agricultural Research","ror":"https://ror.org/04fw54a43","country_code":"IN","type":"government","lineage":["https://openalex.org/I179420787"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Trilochan Mohapatra","raw_affiliation_strings":["Indian Council of Agricultural Research, Krishi Bhawan, New Delhi, 110001, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Indian Council of Agricultural Research, Krishi Bhawan, New Delhi, 110001, India","institution_ids":["https://openalex.org/I179420787"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5051312683","display_name":"Amitha Mithra S. V.","orcid":null},"institutions":[{"id":"https://openalex.org/I4210091233","display_name":"National Research Centre on Plant Biotechnology","ror":"https://ror.org/00cq3cz72","country_code":"IN","type":"facility","lineage":["https://openalex.org/I179420787","https://openalex.org/I4210091233"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Amitha Mithra S. V.","raw_affiliation_strings":["ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India. amithamithra.nrcpb@gmail.com","ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India. amithamithra.nrcpb@gmail.com","institution_ids":["https://openalex.org/I4210091233"]},{"raw_affiliation_string":"ICAR-National Research Centre on Plant Biotechnology, LBS Building, Pusa Campus, New Delhi, 110012, India","institution_ids":["https://openalex.org/I4210091233"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5051312683"],"corresponding_institution_ids":["https://openalex.org/I4210091233"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.3114,"has_fulltext":true,"cited_by_count":38,"citation_normalized_percentile":{"value":0.8311333,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"18","issue":"1","first_page":"432","last_page":"432"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.8737999796867371,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.8737999796867371,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10184","display_name":"Plant Molecular Biology Research","score":0.016100000590085983,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12045","display_name":"Rice Cultivation and Yield Improvement","score":0.01600000075995922,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/drought-stress","display_name":"Drought stress","score":0.6149684190750122},{"id":"https://openalex.org/keywords/crop","display_name":"Crop","score":0.5622079372406006},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.515958845615387},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5048052072525024},{"id":"https://openalex.org/keywords/biotechnology","display_name":"Biotechnology","score":0.4182230234146118},{"id":"https://openalex.org/keywords/agronomy","display_name":"Agronomy","score":0.4166881740093231},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.32009798288345337}],"concepts":[{"id":"https://openalex.org/C2992468275","wikidata":"https://www.wikidata.org/wiki/Q12142810","display_name":"Drought stress","level":2,"score":0.6149684190750122},{"id":"https://openalex.org/C137580998","wikidata":"https://www.wikidata.org/wiki/Q235352","display_name":"Crop","level":2,"score":0.5622079372406006},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.515958845615387},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5048052072525024},{"id":"https://openalex.org/C150903083","wikidata":"https://www.wikidata.org/wiki/Q7108","display_name":"Biotechnology","level":1,"score":0.4182230234146118},{"id":"https://openalex.org/C6557445","wikidata":"https://www.wikidata.org/wiki/Q173113","display_name":"Agronomy","level":1,"score":0.4166881740093231},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.32009798288345337},{"id":"https://openalex.org/C58226133","wikidata":"https://www.wikidata.org/wiki/Q1324199","display_name":"Pulmonary surfactant","level":2,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C55352822","wikidata":"https://www.wikidata.org/wiki/Q5558978","display_name":"Gibbs isotherm","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005819","descriptor_name":"Genetic Markers","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D012275","descriptor_name":"Oryza","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D012965","descriptor_name":"Sodium Chloride","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D012965","descriptor_name":"Sodium Chloride","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D012965","descriptor_name":"Sodium Chloride","qualifier_ui":"Q000494","qualifier_name":"pharmacology","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018895","descriptor_name":"Microsatellite Repeats","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055864","descriptor_name":"Droughts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055864","descriptor_name":"Droughts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055864","descriptor_name":"Droughts","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-017-1846-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1846-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-017-1846-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28964253","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28964253","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:15d7fcb5a8a9415aaede5ff34445c0cd","is_oa":true,"landing_page_url":"https://doaj.org/article/15d7fcb5a8a9415aaede5ff34445c0cd","pdf_url":null,"source":{"id":"https://openalex.org/S4306401280","display_name":"DOAJ (DOAJ: Directory of Open Access Journals)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 18, Iss 1, Pp 1-11 (2017)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:4557491","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5622590","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-017-1846-y","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1846-y","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-017-1846-y","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320769","display_name":"Indian Council of Agricultural Research","ror":"https://ror.org/04fw54a43"},{"id":"https://openalex.org/F4320331037","display_name":"Centre for Agricultural Bioinformatics","ror":null}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2760053263.pdf","grobid_xml":"https://content.openalex.org/works/W2760053263.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W1979941569","https://openalex.org/W1981222811","https://openalex.org/W1983650084","https://openalex.org/W1983749867","https://openalex.org/W2008232358","https://openalex.org/W2035806597","https://openalex.org/W2043566760","https://openalex.org/W2048836536","https://openalex.org/W2049987408","https://openalex.org/W2055080214","https://openalex.org/W2056554121","https://openalex.org/W2063905531","https://openalex.org/W2077230000","https://openalex.org/W2083303134","https://openalex.org/W2101362519","https://openalex.org/W2104567831","https://openalex.org/W2104839681","https://openalex.org/W2107665951","https://openalex.org/W2125866103","https://openalex.org/W2128060661","https://openalex.org/W2129114469","https://openalex.org/W2133408621","https://openalex.org/W2135154814","https://openalex.org/W2135789958","https://openalex.org/W2138032440","https://openalex.org/W2138098955","https://openalex.org/W2144633469","https://openalex.org/W2146512944","https://openalex.org/W2153322520","https://openalex.org/W2158148243","https://openalex.org/W2161640123","https://openalex.org/W2165154634","https://openalex.org/W2168226919","https://openalex.org/W2168546553","https://openalex.org/W2288194273","https://openalex.org/W2319185975","https://openalex.org/W2338715669","https://openalex.org/W2464431018","https://openalex.org/W2528875223","https://openalex.org/W2624203226","https://openalex.org/W4248677600"],"related_works":["https://openalex.org/W2374516811","https://openalex.org/W2378005410","https://openalex.org/W2048876619","https://openalex.org/W1502900663","https://openalex.org/W2170435352","https://openalex.org/W1570606890","https://openalex.org/W2123397376","https://openalex.org/W365436934","https://openalex.org/W2558283333","https://openalex.org/W2359864419"],"abstract_inverted_index":{"BACKGROUND:":[0],"Genome-wide":[1],"microarray":[2,118],"has":[3,184,247],"enabled":[4,186,249],"development":[5,111],"of":[6,25,65,147,176,225,242,252,260,276,283],"robust":[7,157,277],"databases":[8,17],"for":[9,127,133,160,212,223,237,274],"functional":[10,41],"genomics":[11],"studies":[12,43,75],"in":[13,58,84,151,162,203,250,293,298],"rice.":[14,85],"However,":[15],"such":[16],"do":[18],"not":[19],"directly":[20],"cater":[21],"to":[22,31,136,187,192,230,264,289,296],"the":[23,38,62,66,80,145,165,189,194,204],"needs":[24],"breeders.":[26],"Here,":[27],"we":[28,68],"have":[29,69],"attempted":[30],"develop":[32],"a":[33,88,209,268],"web":[34,93],"interface":[35,94],"which":[36],"combines":[37],"information":[39,97],"from":[40,116,280],"genomic":[42],"across":[44,108,168,179],"different":[45],"genetic":[46],"backgrounds":[47],"with":[48,267],"DNA":[49],"markers":[50,233],"so":[51,287],"that":[52],"they":[53],"can":[54,143],"be":[55],"readily":[56],"deployed":[57],"crop":[59,110,163],"improvement.":[60],"In":[61],"current":[63],"version":[64],"database,":[67],"included":[70],"drought":[71,104,139],"and":[72,90,103,113,138,149,181,191,206,215,254,270,285],"salinity":[73],"stress":[74,140],"since":[76,141,219],"these":[77],"two":[78],"are":[79],"major":[81],"abiotic":[82],"stresses":[83],"RESULTS:":[86],"RiceMetaSys,":[87],"user-friendly":[89],"freely":[91],"available":[92],"provides":[95,221],"comprehensive":[96],"on":[98],"salt":[99,137],"responsive":[100,105],"genes":[101,106,159,167,180,279],"(SRGs)":[102],"(DRGs)":[107],"genotypes,":[109],"stages":[112],"tissues,":[114],"identified":[115],"multiple":[117],"datasets.":[119],"'Physical":[120],"position":[121],"search'":[122],"is":[123,172,208,234,263],"an":[124],"attractive":[125],"tool":[126,171,211],"those":[128],"using":[129],"QTL":[130],"based":[131],"approach":[132],"dissecting":[134],"tolerance":[135],"it":[142,220],"provide":[144],"list":[146],"SRGs":[148,205,284],"DRGs":[150,207,286],"any":[152,245],"physical":[153],"interval.":[154],"To":[155],"identify":[156],"candidate":[158,278],"use":[161],"improvement,":[164],"'common":[166],"varieties'":[169],"search":[170,202,272],"useful.":[173],"Graphical":[174],"visualization":[175],"expression":[177,294],"profiles":[178,295],"rice":[182],"genotypes":[183],"been":[185,248],"facilitate":[188,265,290],"user":[190],"make":[193],"comparisons":[195],"more":[196],"impactful.":[197],"Simple":[198],"Sequence":[199],"Repeat":[200],"(SSR)":[201],"valuable":[210],"fine":[213],"mapping":[214],"marker":[216],"assisted":[217],"selection":[218],"primers":[222],"survey":[224],"polymorphism.":[226],"An":[227],"external":[228],"link":[229],"intron":[231],"specific":[232],"also":[235],"provided":[236],"this":[238,261],"purpose.":[239],"Bulk":[240],"retrieval":[241],"data":[243],"without":[244],"limit":[246],"case":[251],"locus":[253],"SSR":[255],"search.":[256],"CONCLUSIONS:":[257],"The":[258],"aim":[259],"database":[262],"users":[266],"simple":[269],"straight-forward":[271],"options":[273],"identification":[275],"among":[281],"thousands":[282],"as":[288],"linking":[291],"variation":[292,297],"phenotype.":[299],"Database":[300],"URL:":[301],"http://14.139.229.201.":[302]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":5},{"year":2022,"cited_by_count":11},{"year":2021,"cited_by_count":6},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":5}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
