{"id":"https://openalex.org/W2748004102","doi":"https://doi.org/10.1186/s12859-017-1783-9","title":"eccCL: parallelized GPU implementation of Ensemble Classifier Chains","display_name":"eccCL: parallelized GPU implementation of Ensemble Classifier Chains","publication_year":2017,"publication_date":"2017-08-17","ids":{"openalex":"https://openalex.org/W2748004102","doi":"https://doi.org/10.1186/s12859-017-1783-9","mag":"2748004102","pmid":"https://pubmed.ncbi.nlm.nih.gov/28818036"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-017-1783-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1783-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-017-1783-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-017-1783-9","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103405558","display_name":"Mona Riemenschneider","orcid":null},"institutions":[{"id":"https://openalex.org/I4210141604","display_name":"Stadtwerke Straubing (Germany)","ror":"https://ror.org/04870rh38","country_code":"DE","type":"company","lineage":["https://openalex.org/I4210141604"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Mona Riemenschneider","raw_affiliation_strings":["Department of Bioinformatics, Straubing Center of Science, Petersgasse 18, Straubing, 94315, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Straubing Center of Science, Petersgasse 18, Straubing, 94315, Germany","institution_ids":["https://openalex.org/I4210141604"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045359926","display_name":"Alexander Herbst","orcid":"https://orcid.org/0000-0003-2351-2554"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Alexander Herbst","raw_affiliation_strings":["Institute of Computer Science, University of M\u00fcnster, Einsteinstr. 62, M\u00fcnster, 48149, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of M\u00fcnster, Einsteinstr. 62, M\u00fcnster, 48149, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017852288","display_name":"Ari Rasch","orcid":"https://orcid.org/0000-0002-0286-0755"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Ari Rasch","raw_affiliation_strings":["Institute of Computer Science, University of M\u00fcnster, Einsteinstr. 62, M\u00fcnster, 48149, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of M\u00fcnster, Einsteinstr. 62, M\u00fcnster, 48149, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061421539","display_name":"Sergei Gorlatch","orcid":"https://orcid.org/0000-0003-3857-9380"},"institutions":[{"id":"https://openalex.org/I22465464","display_name":"University of M\u00fcnster","ror":"https://ror.org/00pd74e08","country_code":"DE","type":"education","lineage":["https://openalex.org/I22465464"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Sergei Gorlatch","raw_affiliation_strings":["Institute of Computer Science, University of M\u00fcnster, Einsteinstr. 62, M\u00fcnster, 48149, Germany"],"affiliations":[{"raw_affiliation_string":"Institute of Computer Science, University of M\u00fcnster, Einsteinstr. 62, M\u00fcnster, 48149, Germany","institution_ids":["https://openalex.org/I22465464"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060650201","display_name":"Dominik Heider","orcid":"https://orcid.org/0000-0002-3108-8311"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Dominik Heider","raw_affiliation_strings":["Department of Bioinformatics, Straubing Center of Science, Petersgasse 18, Straubing, 94315, Germany. d.heider@wz-straubing.de","Present Address: Department of Mathematics and Computer Science, University of Marburg, Hans-Meerwein-Str. 6, Marburg, 35032, Germany. d.heider@wz-straubing.de","Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Alte Akademie 8, Freising, 85354, Germany. d.heider@wz-straubing.de","Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Alte Akademie 8, Freising, 85354, Germany"],"affiliations":[{"raw_affiliation_string":"Department of Bioinformatics, Straubing Center of Science, Petersgasse 18, Straubing, 94315, Germany. d.heider@wz-straubing.de","institution_ids":[]},{"raw_affiliation_string":"Present Address: Department of Mathematics and Computer Science, University of Marburg, Hans-Meerwein-Str. 6, Marburg, 35032, Germany. d.heider@wz-straubing.de","institution_ids":[]},{"raw_affiliation_string":"Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Alte Akademie 8, Freising, 85354, Germany. d.heider@wz-straubing.de","institution_ids":[]},{"raw_affiliation_string":"Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen, Alte Akademie 8, Freising, 85354, Germany","institution_ids":["https://openalex.org/I62916508"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5060650201"],"corresponding_institution_ids":["https://openalex.org/I62916508"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1661,"currency":"EUR","value_usd":1791},"fwci":0.1123,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.51196375,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":95},"biblio":{"volume":"18","issue":"1","first_page":"371","last_page":"371"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9987999796867371,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9912999868392944,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9901999831199646,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7507439255714417},{"id":"https://openalex.org/keywords/classifier","display_name":"Classifier (UML)","score":0.543254017829895},{"id":"https://openalex.org/keywords/general-purpose-computing-on-graphics-processing-units","display_name":"General-purpose computing on graphics processing units","score":0.46163415908813477},{"id":"https://openalex.org/keywords/cuda","display_name":"CUDA","score":0.4204813241958618},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.4188171625137329},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3780197501182556},{"id":"https://openalex.org/keywords/computer-graphics","display_name":"Computer graphics (images)","score":0.2860323190689087},{"id":"https://openalex.org/keywords/graphics","display_name":"Graphics","score":0.21593967080116272}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7507439255714417},{"id":"https://openalex.org/C95623464","wikidata":"https://www.wikidata.org/wiki/Q1096149","display_name":"Classifier (UML)","level":2,"score":0.543254017829895},{"id":"https://openalex.org/C50630238","wikidata":"https://www.wikidata.org/wiki/Q971505","display_name":"General-purpose computing on graphics processing units","level":3,"score":0.46163415908813477},{"id":"https://openalex.org/C2778119891","wikidata":"https://www.wikidata.org/wiki/Q477690","display_name":"CUDA","level":2,"score":0.4204813241958618},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.4188171625137329},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3780197501182556},{"id":"https://openalex.org/C121684516","wikidata":"https://www.wikidata.org/wiki/Q7600677","display_name":"Computer graphics (images)","level":1,"score":0.2860323190689087},{"id":"https://openalex.org/C21442007","wikidata":"https://www.wikidata.org/wiki/Q1027879","display_name":"Graphics","level":2,"score":0.21593967080116272}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-017-1783-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1783-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-017-1783-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28818036","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28818036","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:ddae5f6b0cfe433f92a3ddf781c950bc","is_oa":true,"landing_page_url":"https://doaj.org/article/ddae5f6b0cfe433f92a3ddf781c950bc","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 18, Iss 1, Pp 1-4 (2017)","raw_type":"article"},{"id":"pmh:oai:mediatum.ub.tum.de:node/1434385","is_oa":true,"landing_page_url":"http://mediatum.ub.tum.de/node?id=1434385","pdf_url":null,"source":{"id":"https://openalex.org/S4306400453","display_name":"mediaTUM \u2013 the media and publications repository of the Technical University Munich (Technical University Munich)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I62916508","host_organization_name":"Technical University of Munich","host_organization_lineage":["https://openalex.org/I62916508"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5561639","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5561639","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-017-1783-9","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1783-9","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-017-1783-9","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","display_name":"Good health and well-being","score":0.7099999785423279}],"awards":[{"id":"https://openalex.org/G6052429835","display_name":null,"funder_award_id":"(DFG)","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"},{"id":"https://openalex.org/G8330397625","display_name":null,"funder_award_id":"Funding","funder_id":"https://openalex.org/F4320320879","funder_display_name":"Deutsche Forschungsgemeinschaft"}],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320322957","display_name":"Westf\u00e4lische Wilhelms-Universit\u00e4t M\u00fcnster","ror":"https://ror.org/00pd74e08"},{"id":"https://openalex.org/F4320323383","display_name":"Technische Universit\u00e4t M\u00fcnchen","ror":"https://ror.org/02kkvpp62"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2748004102.pdf","grobid_xml":"https://content.openalex.org/works/W2748004102.grobid-xml"},"referenced_works_count":26,"referenced_works":["https://openalex.org/W1503167101","https://openalex.org/W1515201194","https://openalex.org/W1523388120","https://openalex.org/W1578997390","https://openalex.org/W1953606363","https://openalex.org/W1976357293","https://openalex.org/W1979490250","https://openalex.org/W1981758349","https://openalex.org/W1999954155","https://openalex.org/W2049170138","https://openalex.org/W2104551758","https://openalex.org/W2118712128","https://openalex.org/W2123217057","https://openalex.org/W2123459668","https://openalex.org/W2136431383","https://openalex.org/W2141386958","https://openalex.org/W2156935079","https://openalex.org/W2288331077","https://openalex.org/W2338174866","https://openalex.org/W2483438189","https://openalex.org/W2511835277","https://openalex.org/W2520368209","https://openalex.org/W2911964244","https://openalex.org/W3004042307","https://openalex.org/W3126712840","https://openalex.org/W4238940159"],"related_works":["https://openalex.org/W1963859303","https://openalex.org/W2364044215","https://openalex.org/W2389600408","https://openalex.org/W240129890","https://openalex.org/W3048701459","https://openalex.org/W3213381848","https://openalex.org/W2149078538","https://openalex.org/W2080146221","https://openalex.org/W2370314112","https://openalex.org/W1912958759"],"abstract_inverted_index":{"eccCL":[0],"is":[1,11,33],"a":[2],"handy":[3],"implementation":[4],"of":[5],"Classifier":[6],"Chains":[7],"on":[8],"GPUs,":[9],"which":[10],"able":[12],"to":[13,16],"process":[14],"up":[15],"over":[17],"25,000":[18],"instances":[19],"per":[20],"second,":[21],"and":[22],"thus":[23],"can":[24],"be":[25],"used":[26],"efficiently":[27],"in":[28],"high-throughput":[29],"experiments.":[30],"The":[31],"software":[32],"available":[34],"at":[35],"http://www.heiderlab.de":[36],".":[37]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
