{"id":"https://openalex.org/W2625898396","doi":"https://doi.org/10.1186/s12859-017-1715-8","title":"Analysis and prediction of single-stranded and double-stranded DNA binding proteins based on protein sequences","display_name":"Analysis and prediction of single-stranded and double-stranded DNA binding proteins based on protein sequences","publication_year":2017,"publication_date":"2017-06-12","ids":{"openalex":"https://openalex.org/W2625898396","doi":"https://doi.org/10.1186/s12859-017-1715-8","mag":"2625898396","pmid":"https://pubmed.ncbi.nlm.nih.gov/28606086"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-017-1715-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1715-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-017-1715-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-017-1715-8","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5054667546","display_name":"Wei Wang","orcid":"https://orcid.org/0000-0002-9616-1145"},"institutions":[{"id":"https://openalex.org/I75955062","display_name":"Henan Normal University","ror":"https://ror.org/00s13br28","country_code":"CN","type":"education","lineage":["https://openalex.org/I75955062"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Wei Wang","raw_affiliation_strings":["College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China. weiwang@htu.edu.cn","Laboratory of Computation Intelligence and Information Processing, Engineering Technology Research Center for Computing Intelligence and Data Mining, Xinxiang, Henan Province, 453007, China. weiwang@htu.edu.cn","College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China. weiwang@htu.edu.cn","institution_ids":[]},{"raw_affiliation_string":"Laboratory of Computation Intelligence and Information Processing, Engineering Technology Research Center for Computing Intelligence and Data Mining, Xinxiang, Henan Province, 453007, China. weiwang@htu.edu.cn","institution_ids":[]},{"raw_affiliation_string":"College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China","institution_ids":["https://openalex.org/I75955062"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102841926","display_name":"Lin Sun","orcid":"https://orcid.org/0000-0003-0002-6780"},"institutions":[{"id":"https://openalex.org/I75955062","display_name":"Henan Normal University","ror":"https://ror.org/00s13br28","country_code":"CN","type":"education","lineage":["https://openalex.org/I75955062"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Lin Sun","raw_affiliation_strings":["College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China","institution_ids":["https://openalex.org/I75955062"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058970337","display_name":"Shiguang Zhang","orcid":"https://orcid.org/0000-0001-5047-8481"},"institutions":[{"id":"https://openalex.org/I75955062","display_name":"Henan Normal University","ror":"https://ror.org/00s13br28","country_code":"CN","type":"education","lineage":["https://openalex.org/I75955062"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Shiguang Zhang","raw_affiliation_strings":["College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China","institution_ids":["https://openalex.org/I75955062"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100330906","display_name":"Hongjun Zhang","orcid":"https://orcid.org/0000-0003-4779-3952"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hongjun Zhang","raw_affiliation_strings":["School of Aviation Engineering, Anyang University, Anyang, Henan Province, 455000, China"],"affiliations":[{"raw_affiliation_string":"School of Aviation Engineering, Anyang University, Anyang, Henan Province, 455000, China","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068925622","display_name":"Jinling Shi","orcid":null},"institutions":[{"id":"https://openalex.org/I903994226","display_name":"Xuchang University","ror":"https://ror.org/03k174p87","country_code":"CN","type":"education","lineage":["https://openalex.org/I903994226"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jinling Shi","raw_affiliation_strings":["School of International Education, Xuchang University, Xuchang, Henan Province, 461000, China"],"affiliations":[{"raw_affiliation_string":"School of International Education, Xuchang University, Xuchang, Henan Province, 461000, China","institution_ids":["https://openalex.org/I903994226"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082201226","display_name":"Tianhe Xu","orcid":"https://orcid.org/0000-0001-5818-6264"},"institutions":[{"id":"https://openalex.org/I75955062","display_name":"Henan Normal University","ror":"https://ror.org/00s13br28","country_code":"CN","type":"education","lineage":["https://openalex.org/I75955062"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Tianhe Xu","raw_affiliation_strings":["College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China","institution_ids":["https://openalex.org/I75955062"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5072476383","display_name":"Keliang Li","orcid":null},"institutions":[{"id":"https://openalex.org/I75955062","display_name":"Henan Normal University","ror":"https://ror.org/00s13br28","country_code":"CN","type":"education","lineage":["https://openalex.org/I75955062"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Keliang Li","raw_affiliation_strings":["College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China"],"affiliations":[{"raw_affiliation_string":"College of Computer and Information Engineering, Henan Normal University, Xinxiang, Henan Province, 453007, China","institution_ids":["https://openalex.org/I75955062"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5054667546"],"corresponding_institution_ids":["https://openalex.org/I75955062"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.6736,"has_fulltext":true,"cited_by_count":16,"citation_normalized_percentile":{"value":0.6885566,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"18","issue":"1","first_page":"300","last_page":"300"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.6861579418182373},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6329867839813232},{"id":"https://openalex.org/keywords/dna-binding-protein","display_name":"DNA-binding protein","score":0.5773992538452148},{"id":"https://openalex.org/keywords/dna-binding-site","display_name":"DNA binding site","score":0.5308405160903931},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5168293118476868},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.4739137887954712},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.4682784080505371},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.44368186593055725},{"id":"https://openalex.org/keywords/single-stranded-binding-protein","display_name":"Single-stranded binding protein","score":0.43251392245292664},{"id":"https://openalex.org/keywords/oligonucleotide","display_name":"Oligonucleotide","score":0.42467808723449707},{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.42197537422180176},{"id":"https://openalex.org/keywords/hmg-box","display_name":"HMG-box","score":0.4204627275466919},{"id":"https://openalex.org/keywords/random-forest","display_name":"Random forest","score":0.41103261709213257},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.3552858829498291},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19419091939926147},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.15808168053627014},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.13901406526565552},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.12391045689582825},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12113121151924133}],"concepts":[{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.6861579418182373},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6329867839813232},{"id":"https://openalex.org/C94966510","wikidata":"https://www.wikidata.org/wiki/Q2252764","display_name":"DNA-binding protein","level":4,"score":0.5773992538452148},{"id":"https://openalex.org/C3662595","wikidata":"https://www.wikidata.org/wiki/Q5205743","display_name":"DNA binding site","level":5,"score":0.5308405160903931},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5168293118476868},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.4739137887954712},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.4682784080505371},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.44368186593055725},{"id":"https://openalex.org/C77400797","wikidata":"https://www.wikidata.org/wiki/Q24724047","display_name":"Single-stranded binding protein","level":5,"score":0.43251392245292664},{"id":"https://openalex.org/C129312508","wikidata":"https://www.wikidata.org/wiki/Q133686","display_name":"Oligonucleotide","level":3,"score":0.42467808723449707},{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.42197537422180176},{"id":"https://openalex.org/C5179208","wikidata":"https://www.wikidata.org/wiki/Q3782057","display_name":"HMG-box","level":5,"score":0.4204627275466919},{"id":"https://openalex.org/C169258074","wikidata":"https://www.wikidata.org/wiki/Q245748","display_name":"Random forest","level":2,"score":0.41103261709213257},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.3552858829498291},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19419091939926147},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.15808168053627014},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.13901406526565552},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.12391045689582825},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12113121151924133},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.0}],"mesh":[{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004247","descriptor_name":"DNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004268","descriptor_name":"DNA-Binding Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":true},{"descriptor_ui":"D004277","descriptor_name":"DNA, Single-Stranded","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004277","descriptor_name":"DNA, Single-Stranded","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004277","descriptor_name":"DNA, Single-Stranded","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D004277","descriptor_name":"DNA, Single-Stranded","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011485","descriptor_name":"Protein Binding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060388","descriptor_name":"Support Vector Machine","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-017-1715-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1715-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-017-1715-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28606086","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28606086","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:5793c1c2dfee4f2eba22861f902951c6","is_oa":true,"landing_page_url":"https://doaj.org/article/5793c1c2dfee4f2eba22861f902951c6","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":"cc-by-sa","license_id":"https://openalex.org/licenses/cc-by-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 18, Iss 1, Pp 1-10 (2017)","raw_type":"article"},{"id":"pmh:oai:europepmc.org:4320065","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC5469069","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:5469069","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5469069","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-017-1715-8","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1715-8","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-017-1715-8","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","score":0.7300000190734863,"id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G1152039656","display_name":null,"funder_award_id":"qd15132","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1157037479","display_name":null,"funder_award_id":"42102210","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G1441924853","display_name":null,"funder_award_id":"61402153","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G2082826544","display_name":null,"funder_award_id":"Postdoctoral","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3021698286","display_name":null,"funder_award_id":"qd15130","funder_id":"https://openalex.org/F4320311345","funder_display_name":"Henan Normal University"},{"id":"https://openalex.org/G322031168","display_name":null,"funder_award_id":"qd15130","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3271602924","display_name":null,"funder_award_id":"17B520002","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G3317480652","display_name":null,"funder_award_id":"Science","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G391238517","display_name":null,"funder_award_id":", and","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4009049029","display_name":null,"funder_award_id":"Startup","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4363906057","display_name":null,"funder_award_id":"qd15129","funder_id":"https://openalex.org/F4320311345","funder_display_name":"Henan Normal University"},{"id":"https://openalex.org/G465995556","display_name":null,"funder_award_id":"16A520016","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4713543433","display_name":null,"funder_award_id":"61402","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4963412676","display_name":null,"funder_award_id":"17B520002","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G4980802457","display_name":null,"funder_award_id":"142102210056","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5167091242","display_name":null,"funder_award_id":"No. 1","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5469367667","display_name":null,"funder_award_id":"qd15132","funder_id":"https://openalex.org/F4320311345","funder_display_name":"Henan Normal University"},{"id":"https://openalex.org/G5653632540","display_name":null,"funder_award_id":"61402153","funder_id":"https://openalex.org/F4320311345","funder_display_name":"Henan Normal University"},{"id":"https://openalex.org/G5917827055","display_name":null,"funder_award_id":"16A520016","funder_id":"https://openalex.org/F4320311345","funder_display_name":"Henan Normal University"},{"id":"https://openalex.org/G5939423041","display_name":null,"funder_award_id":"Technology","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5972354309","display_name":null,"funder_award_id":"qd15129","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G5994120800","display_name":null,"funder_award_id":"Natural","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6370361930","display_name":null,"funder_award_id":"142102210056","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G6536543852","display_name":null,"funder_award_id":"17B520036","funder_id":"https://openalex.org/F4320311345","funder_display_name":"Henan Normal University"},{"id":"https://openalex.org/G6735113035","display_name":null,"funder_award_id":"qd15132","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G7296483059","display_name":null,"funder_award_id":"16A520016","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G7533241288","display_name":null,"funder_award_id":"17B520036","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7622383829","display_name":null,"funder_award_id":"142102210056","funder_id":"https://openalex.org/F4320311345","funder_display_name":"Henan Normal University"},{"id":"https://openalex.org/G8366471677","display_name":null,"funder_award_id":"qd15129","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8470223357","display_name":null,"funder_award_id":"qd15130","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G8502452777","display_name":null,"funder_award_id":"61402153","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"},{"id":"https://openalex.org/G8689003394","display_name":null,"funder_award_id":"17B520002","funder_id":"https://openalex.org/F4320311345","funder_display_name":"Henan Normal University"},{"id":"https://openalex.org/G8981357444","display_name":null,"funder_award_id":"17B520036","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320311345","display_name":"Henan Normal University","ror":"https://ror.org/00s13br28"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321543","display_name":"China Postdoctoral Science Foundation","ror":"https://ror.org/0426zh255"},{"id":"https://openalex.org/F4320327051","display_name":"Science and Technology Department of Henan Province","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2625898396.pdf","grobid_xml":"https://content.openalex.org/works/W2625898396.grobid-xml"},"referenced_works_count":64,"referenced_works":["https://openalex.org/W17408266","https://openalex.org/W1161601223","https://openalex.org/W1491553314","https://openalex.org/W1543773936","https://openalex.org/W1559579542","https://openalex.org/W1581453124","https://openalex.org/W1818938668","https://openalex.org/W1966427711","https://openalex.org/W1974225312","https://openalex.org/W1978937741","https://openalex.org/W1980121140","https://openalex.org/W1985582731","https://openalex.org/W1986088879","https://openalex.org/W1987667986","https://openalex.org/W1994977138","https://openalex.org/W1998518361","https://openalex.org/W2012627860","https://openalex.org/W2016051619","https://openalex.org/W2016789453","https://openalex.org/W2022630461","https://openalex.org/W2024572834","https://openalex.org/W2026690931","https://openalex.org/W2042459925","https://openalex.org/W2048851100","https://openalex.org/W2050913696","https://openalex.org/W2051808158","https://openalex.org/W2052490288","https://openalex.org/W2058918675","https://openalex.org/W2061892659","https://openalex.org/W2071286719","https://openalex.org/W2079230093","https://openalex.org/W2079741453","https://openalex.org/W2081998091","https://openalex.org/W2083812665","https://openalex.org/W2084985871","https://openalex.org/W2087518504","https://openalex.org/W2090557416","https://openalex.org/W2090561245","https://openalex.org/W2097606916","https://openalex.org/W2108733892","https://openalex.org/W2112585401","https://openalex.org/W2114669670","https://openalex.org/W2117519369","https://openalex.org/W2118933796","https://openalex.org/W2129410760","https://openalex.org/W2134923281","https://openalex.org/W2135217050","https://openalex.org/W2136637035","https://openalex.org/W2136975656","https://openalex.org/W2150859192","https://openalex.org/W2155770902","https://openalex.org/W2158714788","https://openalex.org/W2165198127","https://openalex.org/W2170560345","https://openalex.org/W2234451305","https://openalex.org/W2317960638","https://openalex.org/W2339812959","https://openalex.org/W2508414719","https://openalex.org/W2570516417","https://openalex.org/W2572837991","https://openalex.org/W2577719764","https://openalex.org/W2772171743","https://openalex.org/W4242319700","https://openalex.org/W6600009415"],"related_works":["https://openalex.org/W2030922238","https://openalex.org/W2041718959","https://openalex.org/W2099901107","https://openalex.org/W1776902257","https://openalex.org/W2148072770","https://openalex.org/W1926921733","https://openalex.org/W2062800010","https://openalex.org/W1974642429","https://openalex.org/W2028056900","https://openalex.org/W1870851597"],"abstract_inverted_index":{"Using":[0],"various":[1],"sequence-derived":[2],"features,":[3,20],"a":[4],"novel":[5,19],"method":[6,16],"is":[7],"proposed":[8],"to":[9,25],"distinguish":[10],"DSBs":[11],"and":[12],"SSBs":[13],"accurately.":[14],"The":[15],"also":[17],"explores":[18],"which":[21],"could":[22],"be":[23],"helpful":[24],"discover":[26],"the":[27],"binding":[28],"specificity":[29],"of":[30],"DNA-binding":[31],"proteins.":[32]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1}],"updated_date":"2026-04-16T08:26:57.006410","created_date":"2025-10-10T00:00:00"}
