{"id":"https://openalex.org/W2612975255","doi":"https://doi.org/10.1186/s12859-017-1670-4","title":"A Bayesian taxonomic classification method for 16S rRNA gene sequences with improved species-level accuracy","display_name":"A Bayesian taxonomic classification method for 16S rRNA gene sequences with improved species-level accuracy","publication_year":2017,"publication_date":"2017-05-10","ids":{"openalex":"https://openalex.org/W2612975255","doi":"https://doi.org/10.1186/s12859-017-1670-4","mag":"2612975255","pmid":"https://pubmed.ncbi.nlm.nih.gov/28486927"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-017-1670-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1670-4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-017-1670-4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-017-1670-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101554182","display_name":"Xiang Gao","orcid":"https://orcid.org/0000-0002-1864-837X"},"institutions":[{"id":"https://openalex.org/I1925986","display_name":"Loyola University Chicago","ror":"https://ror.org/04b6x2g63","country_code":"US","type":"education","lineage":["https://openalex.org/I1925986"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Xiang Gao","raw_affiliation_strings":["Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA"],"affiliations":[{"raw_affiliation_string":"Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA","institution_ids":["https://openalex.org/I1925986"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059180999","display_name":"Huaiying Lin","orcid":"https://orcid.org/0000-0003-2339-9491"},"institutions":[{"id":"https://openalex.org/I1925986","display_name":"Loyola University Chicago","ror":"https://ror.org/04b6x2g63","country_code":"US","type":"education","lineage":["https://openalex.org/I1925986"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Huaiying Lin","raw_affiliation_strings":["Center for Biomedical Informatics, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA","Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA"],"affiliations":[{"raw_affiliation_string":"Center for Biomedical Informatics, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA","institution_ids":["https://openalex.org/I1925986"]},{"raw_affiliation_string":"Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA","institution_ids":["https://openalex.org/I1925986"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061160395","display_name":"Kashi V. Revanna","orcid":null},"institutions":[{"id":"https://openalex.org/I1925986","display_name":"Loyola University Chicago","ror":"https://ror.org/04b6x2g63","country_code":"US","type":"education","lineage":["https://openalex.org/I1925986"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kashi Revanna","raw_affiliation_strings":["Center for Biomedical Informatics, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA","Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA"],"affiliations":[{"raw_affiliation_string":"Center for Biomedical Informatics, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA","institution_ids":["https://openalex.org/I1925986"]},{"raw_affiliation_string":"Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA","institution_ids":["https://openalex.org/I1925986"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088669922","display_name":"Qunfeng Dong","orcid":"https://orcid.org/0000-0002-4610-1670"},"institutions":[{"id":"https://openalex.org/I1925986","display_name":"Loyola University Chicago","ror":"https://ror.org/04b6x2g63","country_code":"US","type":"education","lineage":["https://openalex.org/I1925986"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Qunfeng Dong","raw_affiliation_strings":["Bioinformatics Program, Loyola University Chicago Lake Shore Campus, Chicago, IL, 60660, USA. qdong@luc.edu","Center for Biomedical Informatics, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA. qdong@luc.edu","Department of Computer Science, Loyola University Chicago Water Tower Campus, Chicago, IL, 60611, USA. qdong@luc.edu","Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA. qdong@luc.edu","Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Loyola University Chicago Lake Shore Campus, Chicago, IL, 60660, USA. qdong@luc.edu","institution_ids":["https://openalex.org/I1925986"]},{"raw_affiliation_string":"Center for Biomedical Informatics, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA. qdong@luc.edu","institution_ids":["https://openalex.org/I1925986"]},{"raw_affiliation_string":"Department of Computer Science, Loyola University Chicago Water Tower Campus, Chicago, IL, 60611, USA. qdong@luc.edu","institution_ids":["https://openalex.org/I1925986"]},{"raw_affiliation_string":"Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA. qdong@luc.edu","institution_ids":["https://openalex.org/I1925986"]},{"raw_affiliation_string":"Department of Public Health Sciences, Loyola University Chicago Health Sciences Division, Maywood, IL, 60153, USA","institution_ids":["https://openalex.org/I1925986"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5101554182"],"corresponding_institution_ids":["https://openalex.org/I1925986"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":6.8501,"has_fulltext":true,"cited_by_count":239,"citation_normalized_percentile":{"value":0.9771966,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"18","issue":"1","first_page":"247","last_page":"247"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10066","display_name":"Gut microbiota and health","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9894000291824341,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/taxonomic-rank","display_name":"Taxonomic rank","score":0.6265357136726379},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.5862438678741455},{"id":"https://openalex.org/keywords/pairwise-comparison","display_name":"Pairwise comparison","score":0.49173596501350403},{"id":"https://openalex.org/keywords/naive-bayes-classifier","display_name":"Naive Bayes classifier","score":0.4811371862888336},{"id":"https://openalex.org/keywords/16s-ribosomal-rna","display_name":"16S ribosomal RNA","score":0.47287601232528687},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.46031424403190613},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.45632365345954895},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.3652244806289673},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35887932777404785},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3265868127346039},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2454993724822998},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21211212873458862},{"id":"https://openalex.org/keywords/support-vector-machine","display_name":"Support vector machine","score":0.09439164400100708},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.08186861872673035}],"concepts":[{"id":"https://openalex.org/C189592816","wikidata":"https://www.wikidata.org/wiki/Q427626","display_name":"Taxonomic rank","level":3,"score":0.6265357136726379},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.5862438678741455},{"id":"https://openalex.org/C184898388","wikidata":"https://www.wikidata.org/wiki/Q1435712","display_name":"Pairwise comparison","level":2,"score":0.49173596501350403},{"id":"https://openalex.org/C52001869","wikidata":"https://www.wikidata.org/wiki/Q812530","display_name":"Naive Bayes classifier","level":3,"score":0.4811371862888336},{"id":"https://openalex.org/C42062724","wikidata":"https://www.wikidata.org/wiki/Q1209205","display_name":"16S ribosomal RNA","level":3,"score":0.47287601232528687},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.46031424403190613},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.45632365345954895},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.3652244806289673},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35887932777404785},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3265868127346039},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2454993724822998},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21211212873458862},{"id":"https://openalex.org/C12267149","wikidata":"https://www.wikidata.org/wiki/Q282453","display_name":"Support vector machine","level":2,"score":0.09439164400100708},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.08186861872673035},{"id":"https://openalex.org/C71640776","wikidata":"https://www.wikidata.org/wiki/Q16521","display_name":"Taxon","level":2,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001483","descriptor_name":"Base Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001499","descriptor_name":"Bayes Theorem","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002965","descriptor_name":"Classification","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002965","descriptor_name":"Classification","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002965","descriptor_name":"Classification","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012336","descriptor_name":"RNA, Ribosomal, 16S","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013045","descriptor_name":"Species Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-017-1670-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1670-4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-017-1670-4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:28486927","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/28486927","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:doaj.org/article:3f160480a5c8438294c3004ac16fb5a9","is_oa":true,"landing_page_url":"https://doaj.org/article/3f160480a5c8438294c3004ac16fb5a9","pdf_url":null,"source":{"id":"https://openalex.org/S112646816","display_name":"SHILAP Revista de lepidopterolog\u00eda","issn_l":"0300-5267","issn":["0300-5267","2340-4078"],"is_oa":true,"is_in_doaj":true,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, Vol 18, Iss 1, Pp 1-10 (2017)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5424349","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5424349","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-017-1670-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-017-1670-4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-017-1670-4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6100000143051147,"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15"}],"awards":[{"id":"https://openalex.org/G1446746615","display_name":null,"funder_award_id":"R01AI116706","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4765290643","display_name":null,"funder_award_id":"06-01","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5858354989","display_name":null,"funder_award_id":"U01HL121831","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2612975255.pdf","grobid_xml":"https://content.openalex.org/works/W2612975255.grobid-xml"},"referenced_works_count":28,"referenced_works":["https://openalex.org/W46659105","https://openalex.org/W1847253990","https://openalex.org/W1926422794","https://openalex.org/W1988925586","https://openalex.org/W1989348205","https://openalex.org/W1995945562","https://openalex.org/W2007447692","https://openalex.org/W2008528231","https://openalex.org/W2030966943","https://openalex.org/W2057197272","https://openalex.org/W2072970694","https://openalex.org/W2074986735","https://openalex.org/W2090079179","https://openalex.org/W2107594154","https://openalex.org/W2116895571","https://openalex.org/W2122796622","https://openalex.org/W2124715997","https://openalex.org/W2132926880","https://openalex.org/W2144283502","https://openalex.org/W2152885278","https://openalex.org/W2158714788","https://openalex.org/W2159954944","https://openalex.org/W2160697532","https://openalex.org/W2282822330","https://openalex.org/W2320723632","https://openalex.org/W2797563284","https://openalex.org/W2951176108","https://openalex.org/W4254275792"],"related_works":["https://openalex.org/W2487162673","https://openalex.org/W2793211469","https://openalex.org/W2949152769","https://openalex.org/W4372354731","https://openalex.org/W2942366970","https://openalex.org/W2807634898","https://openalex.org/W1692008701","https://openalex.org/W2597588799","https://openalex.org/W4360593462","https://openalex.org/W2562400057"],"abstract_inverted_index":{"Reliable":[0],"species-level":[1],"classification":[2,21,40,76],"for":[3,13,60,65,74],"16S":[4],"rRNA":[5],"or":[6],"other":[7],"phylogenetic":[8,79],"marker":[9,80],"genes":[10],"is":[11,57,87],"critical":[12],"microbiome":[14,63],"research.":[15],"Our":[16,83],"software":[17],"shows":[18],"significantly":[19],"higher":[20,52],"accuracy":[22],"than":[23],"the":[24,35],"existing":[25],"tools":[26],"and":[27],"we":[28],"provide":[29],"probabilistic-based":[30],"confidence":[31],"scores":[32],"to":[33,47],"evaluate":[34],"reliability":[36],"of":[37,77],"our":[38,55,69],"taxonomic":[39,75],"assignments":[41],"based":[42],"on":[43],"multiple":[44],"database":[45],"matches":[46],"query":[48],"sequences.":[49,82],"Despite":[50],"its":[51],"computational":[53],"costs,":[54],"method":[56,70],"still":[58],"suitable":[59],"analyzing":[61],"large-scale":[62],"datasets":[64],"practical":[66],"purposes.":[67],"Furthermore,":[68],"can":[71],"be":[72],"applied":[73],"any":[78],"gene":[81],"software,":[84],"called":[85],"BLCA,":[86],"freely":[88],"available":[89],"at":[90],"https://github.com/qunfengdong/BLCA":[91],".":[92]},"counts_by_year":[{"year":2026,"cited_by_count":8},{"year":2025,"cited_by_count":32},{"year":2024,"cited_by_count":34},{"year":2023,"cited_by_count":34},{"year":2022,"cited_by_count":32},{"year":2021,"cited_by_count":37},{"year":2020,"cited_by_count":26},{"year":2019,"cited_by_count":20},{"year":2018,"cited_by_count":12},{"year":2017,"cited_by_count":3}],"updated_date":"2026-04-04T08:04:53.788161","created_date":"2025-10-10T00:00:00"}