{"id":"https://openalex.org/W2550915265","doi":"https://doi.org/10.1186/s12859-016-1352-7","title":"Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building","display_name":"Introducing Explorer of Taxon Concepts with a case study on spider measurement matrix building","publication_year":2016,"publication_date":"2016-11-17","ids":{"openalex":"https://openalex.org/W2550915265","doi":"https://doi.org/10.1186/s12859-016-1352-7","mag":"2550915265","pmid":"https://pubmed.ncbi.nlm.nih.gov/27855645"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-1352-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1352-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1352-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1352-7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":null,"display_name":"Hong Cui","orcid":"https://orcid.org/0000-0003-0828-1102"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Hong Cui","raw_affiliation_strings":["University of Arizona, Tucson, AZ, USA. hongcui@email.arizona.edu","University of Arizona, Tucson, AZ, USA"],"raw_orcid":"https://orcid.org/0000-0003-0828-1102","affiliations":[{"raw_affiliation_string":"University of Arizona, Tucson, AZ, USA. hongcui@email.arizona.edu","institution_ids":["https://openalex.org/I138006243"]},{"raw_affiliation_string":"University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064023395","display_name":"Dongfang Xu","orcid":"https://orcid.org/0000-0003-0828-1102"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dongfang Xu","raw_affiliation_strings":["University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071670053","display_name":"Steven Chong","orcid":"https://orcid.org/0000-0003-1264-1166"},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Steven S. Chong","raw_affiliation_strings":["University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000980591","display_name":"Mart\u00edn J. Ramir\u00e9z","orcid":"https://orcid.org/0000-0002-0358-0130"},"institutions":[{"id":"https://openalex.org/I151201029","display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas","ror":"https://ror.org/03cqe8w59","country_code":"AR","type":"government","lineage":["https://openalex.org/I151201029","https://openalex.org/I4210123736","https://openalex.org/I4387155568"]},{"id":"https://openalex.org/I4210086432","display_name":"Bernardino Rivadavia Natural Sciences Museum","ror":"https://ror.org/001ecav82","country_code":"AR","type":"archive","lineage":["https://openalex.org/I4210086432"]}],"countries":["AR"],"is_corresponding":false,"raw_author_name":"Martin Ramirez","raw_affiliation_strings":["Museo Argentino de Ciencias, Naturales, CONICET, Buenos Aires, Argentina"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Museo Argentino de Ciencias, Naturales, CONICET, Buenos Aires, Argentina","institution_ids":["https://openalex.org/I151201029","https://openalex.org/I4210086432"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047101123","display_name":"Thomas Rodenhausen","orcid":null},"institutions":[{"id":"https://openalex.org/I138006243","display_name":"University of Arizona","ror":"https://ror.org/03m2x1q45","country_code":"US","type":"education","lineage":["https://openalex.org/I138006243"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas Rodenhausen","raw_affiliation_strings":["University of Arizona, Tucson, AZ, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Arizona, Tucson, AZ, USA","institution_ids":["https://openalex.org/I138006243"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029605705","display_name":"James Macklin","orcid":"https://orcid.org/0000-0001-9508-1349"},"institutions":[{"id":"https://openalex.org/I1331897569","display_name":"Agriculture and Agri-Food Canada","ror":"https://ror.org/051dzs374","country_code":"CA","type":"government","lineage":["https://openalex.org/I1331897569","https://openalex.org/I2802286613"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"James A. Macklin","raw_affiliation_strings":["Agriculture and Agri-Food Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Agriculture and Agri-Food Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I1331897569"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057600294","display_name":"Bertram Lud\u00e4scher","orcid":"https://orcid.org/0000-0001-9140-936X"},"institutions":[{"id":"https://openalex.org/I157725225","display_name":"University of Illinois Urbana-Champaign","ror":"https://ror.org/047426m28","country_code":"US","type":"education","lineage":["https://openalex.org/I157725225"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Bertram Lud\u00e4scher","raw_affiliation_strings":["University of Illinois at Urbana-Champaign, Champaign, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Illinois at Urbana-Champaign, Champaign, USA","institution_ids":["https://openalex.org/I157725225"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079041086","display_name":"Robert A. Morris","orcid":"https://orcid.org/0000-0003-4762-4817"},"institutions":[{"id":"https://openalex.org/I136199984","display_name":"Harvard University","ror":"https://ror.org/03vek6s52","country_code":"US","type":"education","lineage":["https://openalex.org/I136199984"]},{"id":"https://openalex.org/I33434090","display_name":"University of Massachusetts Boston","ror":"https://ror.org/04ydmy275","country_code":"US","type":"education","lineage":["https://openalex.org/I33434090"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Robert A. Morris","raw_affiliation_strings":["University of Massachusetts at Boston and Harvard University Herbaria, Massachusetts, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"University of Massachusetts at Boston and Harvard University Herbaria, Massachusetts, USA","institution_ids":["https://openalex.org/I136199984","https://openalex.org/I33434090"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013935200","display_name":"Eduardo M. Soto","orcid":"https://orcid.org/0000-0001-6500-5978"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eduardo M. Soto","raw_affiliation_strings":["Department of Geology & Geophysics, Yale University, New Haven, Connecticut, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Geology & Geophysics, Yale University, New Haven, Connecticut, USA","institution_ids":["https://openalex.org/I32971472"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003611094","display_name":"Nicol\u00e1s Mongiardino Koch","orcid":"https://orcid.org/0000-0001-6317-5869"},"institutions":[{"id":"https://openalex.org/I32971472","display_name":"Yale University","ror":"https://ror.org/03v76x132","country_code":"US","type":"education","lineage":["https://openalex.org/I32971472"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nicol\u00e1s Mongiardino Koch","raw_affiliation_strings":["Department of Geology & Geophysics, Yale University, New Haven, Connecticut, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Geology & Geophysics, Yale University, New Haven, Connecticut, USA","institution_ids":["https://openalex.org/I32971472"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":8,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I138006243"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":2.5649,"has_fulltext":true,"cited_by_count":32,"citation_normalized_percentile":{"value":0.89881927,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"17","issue":"1","first_page":"471","last_page":"471"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7032999992370605,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7032999992370605,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10895","display_name":"Species Distribution and Climate Change","score":0.061000000685453415,"subfield":{"id":"https://openalex.org/subfields/2302","display_name":"Ecological Modeling"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12012","display_name":"Diatoms and Algae Research","score":0.048900000751018524,"subfield":{"id":"https://openalex.org/subfields/2502","display_name":"Biomaterials"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/spider","display_name":"Spider","score":0.7897332906723022},{"id":"https://openalex.org/keywords/taxon","display_name":"Taxon","score":0.6557800769805908},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4599003791809082},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4513850808143616},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.43076297640800476},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4272100329399109},{"id":"https://openalex.org/keywords/matrix","display_name":"Matrix (chemical analysis)","score":0.4220537543296814},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39168107509613037},{"id":"https://openalex.org/keywords/geography","display_name":"Geography","score":0.3524435758590698},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.2843824625015259},{"id":"https://openalex.org/keywords/chemistry","display_name":"Chemistry","score":0.07036063075065613}],"concepts":[{"id":"https://openalex.org/C2780181586","wikidata":"https://www.wikidata.org/wiki/Q3966705","display_name":"Spider","level":2,"score":0.7897332906723022},{"id":"https://openalex.org/C71640776","wikidata":"https://www.wikidata.org/wiki/Q16521","display_name":"Taxon","level":2,"score":0.6557800769805908},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4599003791809082},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4513850808143616},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.43076297640800476},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4272100329399109},{"id":"https://openalex.org/C106487976","wikidata":"https://www.wikidata.org/wiki/Q685816","display_name":"Matrix (chemical analysis)","level":2,"score":0.4220537543296814},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39168107509613037},{"id":"https://openalex.org/C205649164","wikidata":"https://www.wikidata.org/wiki/Q1071","display_name":"Geography","level":0,"score":0.3524435758590698},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.2843824625015259},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.07036063075065613},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005075","descriptor_name":"Biological Evolution","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013112","descriptor_name":"Spiders","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D013112","descriptor_name":"Spiders","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D013112","descriptor_name":"Spiders","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false}],"locations_count":9,"locations":[{"id":"doi:10.1186/s12859-016-1352-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1352-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1352-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27855645","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27855645","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:5114841","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5114841","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:repository.arizona.edu:10150/622823","is_oa":true,"landing_page_url":"http://hdl.handle.net/10150/622823","pdf_url":null,"source":{"id":"https://openalex.org/S4306400271","display_name":"UA Campus Repository (The University of Arizona)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I138006243","host_organization_name":"University of Arizona","host_organization_lineage":["https://openalex.org/I138006243"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:dash.harvard.edu:1/29626194","is_oa":true,"landing_page_url":"http://nrs.harvard.edu/urn-3:HUL.InstRepos:29626194","pdf_url":null,"source":{"id":"https://openalex.org/S4306401540","display_name":"Digital Access to Scholarship at Harvard (DASH) (Harvard University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I136199984","host_organization_name":"Harvard University","host_organization_lineage":["https://openalex.org/I136199984"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:ark:/13030/qt5998j6wk","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:americanae.aecid.es:3843861","is_oa":true,"landing_page_url":"http://americanae.aecid.es/americanae/es/registros/registro.do?tipoRegistro=MTD&idBib=3843861","pdf_url":null,"source":{"id":"https://openalex.org/S4306400786","display_name":"Americanae (AECID Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-sa","license_id":"https://openalex.org/licenses/cc-by-nc-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"reponame:CONICET Digital (CONICET)","raw_type":"http://purl.org/coar/resource_type/c_6501"},{"id":"pmh:oai:escholarship.org:ark:/13030/qt5998j6wk","is_oa":true,"landing_page_url":"https://escholarship.org/uc/item/5998j6wk","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, vol 17, iss 1","raw_type":"article"},{"id":"pmh:oai:ri.conicet.gov.ar:11336/49580","is_oa":true,"landing_page_url":"http://hdl.handle.net/11336/49580","pdf_url":null,"source":{"id":"https://openalex.org/S4306402641","display_name":"LA Referencia (Red Federada de Repositorios Institucionales de Publicaciones Cient\u00edficas)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4383465926","host_organization_name":"LA Referencia","host_organization_lineage":["https://openalex.org/I4383465926"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-sa","license_id":"https://openalex.org/licenses/cc-by-nc-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"reponame:CONICET Digital (CONICET)","raw_type":"http://purl.org/coar/resource_type/c_6501"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-1352-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1352-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1352-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1091775725","display_name":null,"funder_award_id":"PIP-2012","funder_id":"https://openalex.org/F4320321594","funder_display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas"},{"id":"https://openalex.org/G1145695432","display_name":null,"funder_award_id":"2012-0943","funder_id":"https://openalex.org/F4320321594","funder_display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas"},{"id":"https://openalex.org/G2891145013","display_name":"BCSP:  Collaborative Research:   ABI Development: Exploring Taxon Concepts (ETC) through analyzing fine-grained semantic markup of descriptive literature","funder_award_id":"1147266","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G4243918469","display_name":null,"funder_award_id":"No. DBI-1147266","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7907632345","display_name":null,"funder_award_id":"No. PIP-2012-0943","funder_id":"https://openalex.org/F4320321594","funder_display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320310009","display_name":"University of Florida","ror":"https://ror.org/02y3ad647"},{"id":"https://openalex.org/F4320321594","display_name":"Consejo Nacional de Investigaciones Cient\u00edficas y T\u00e9cnicas","ror":"https://ror.org/03cqe8w59"},{"id":"https://openalex.org/F4320331904","display_name":"Stony Brook University","ror":"https://ror.org/05qghxh33"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2550915265.pdf","grobid_xml":"https://content.openalex.org/works/W2550915265.grobid-xml"},"referenced_works_count":46,"referenced_works":["https://openalex.org/W19601399","https://openalex.org/W42739717","https://openalex.org/W1522592213","https://openalex.org/W1907565771","https://openalex.org/W1919288401","https://openalex.org/W1921860165","https://openalex.org/W1966724204","https://openalex.org/W1978620866","https://openalex.org/W1981275193","https://openalex.org/W1986463049","https://openalex.org/W1987248861","https://openalex.org/W1988834855","https://openalex.org/W2007859640","https://openalex.org/W2018002298","https://openalex.org/W2026656222","https://openalex.org/W2053673723","https://openalex.org/W2059224185","https://openalex.org/W2061397531","https://openalex.org/W2061809273","https://openalex.org/W2075182631","https://openalex.org/W2079442270","https://openalex.org/W2082950241","https://openalex.org/W2097606805","https://openalex.org/W2114039834","https://openalex.org/W2131084949","https://openalex.org/W2134437645","https://openalex.org/W2139228834","https://openalex.org/W2147834895","https://openalex.org/W2149142938","https://openalex.org/W2155370454","https://openalex.org/W2157726400","https://openalex.org/W2159033162","https://openalex.org/W2162340487","https://openalex.org/W2168211178","https://openalex.org/W2170041483","https://openalex.org/W2174285344","https://openalex.org/W2251599843","https://openalex.org/W2314422014","https://openalex.org/W2314523768","https://openalex.org/W2331760095","https://openalex.org/W2611511275","https://openalex.org/W4205883684","https://openalex.org/W4211156271","https://openalex.org/W4231244517","https://openalex.org/W4235637596","https://openalex.org/W4299637834"],"related_works":["https://openalex.org/W3116347567","https://openalex.org/W2054489131","https://openalex.org/W2989850994","https://openalex.org/W1823320495","https://openalex.org/W2349288810","https://openalex.org/W2226537640","https://openalex.org/W3045804027","https://openalex.org/W1540548894","https://openalex.org/W2551647223","https://openalex.org/W1850180652"],"abstract_inverted_index":{"BACKGROUND:":[0],"Taxonomic":[1],"descriptions":[2,39,66,109,184,256,263,282],"are":[3,244,258,264],"traditionally":[4],"composed":[5],"in":[6,11,41,181,231,302],"natural":[7],"language":[8],"and":[9,51,73,80,110,128,132,139,154,220,240,246,257,283],"published":[10,40,290],"a":[12,30,103,169],"format":[13],"that":[14,36,47,63,205,268],"cannot":[15],"be":[16,49,164,295],"directly":[17],"used":[18,133],"by":[19,134,174],"computers.":[20],"The":[21,144,202,224,292],"Exploring":[22],"Taxon":[23],"Concepts":[24],"(ETC)":[25],"project":[26],"has":[27],"been":[28],"developing":[29],"set":[31,104,118],"of":[32,84,105,119,125,188,197,208,216,278,288],"web-based":[33],"software":[34],"tools":[35,145,248,293],"convert":[37],"morphological":[38,65,108],"telegraphic":[42],"style":[43],"to":[44,60,70,96,163,168,193,297],"character":[45],"data":[46,279],"can":[48],"reused":[50],"repurposed.":[52],"This":[53],"paper":[54],"introduces":[55],"the":[56,82,85,112,116,135,155,158,175,182,186,194,199,209,214,217,232,262,270,285,289],"first":[57],"semi-automated":[58],"pipeline,":[59],"our":[61],"knowledge,":[62],"converts":[64],"into":[67],"taxon-character":[68],"matrices":[69,101],"support":[71,298],"systematics":[72],"evolutionary":[74],"biology":[75],"research.":[76],"We":[77],"then":[78],"demonstrate":[79],"evaluate":[81],"use":[83],"ETC":[86,136,140,237,241],"Input":[87],"Creation":[88],"-":[89,92],"Text":[90,137,238],"Capture":[91,138,239],"Matrix":[93,141,242],"Generation":[94,142,243],"pipeline":[95],"generate":[97],"body":[98,150],"part":[99,151],"measurement":[100,152,189,251],"from":[102,157,253,280],"188":[106],"spider":[107,120,149,254],"report":[111],"findings.":[113],"RESULTS:":[114],"From":[115],"given":[117],"taxonomic":[121,255],"publications,":[122],"two":[123,147],"versions":[124],"input":[126,160],"(original":[127],"normalized)":[129],"were":[130,191],"generated":[131],"tools.":[143],"produced":[146],"corresponding":[148],"matrices,":[153],"matrix":[156,172,219,226],"normalized":[159],"was":[161],"found":[162],"much":[165],"more":[166,259],"similar":[167],"gold":[170,233],"standard":[171,234],"hand-curated":[173],"scientist":[176],"co-authors.":[177],"Special":[178,266],"conventions":[179,267],"utilized":[180],"original":[183,200],"(e.g.,":[185],"omission":[187],"units)":[190],"attributed":[192],"lower":[195],"performance":[196],"using":[198],"input.":[201],"results":[203],"show":[204],"simple":[206],"normalization":[207],"description":[210,271],"text":[211,272],"greatly":[212],"increased":[213],"quality":[215],"machine-generated":[218,225],"reduced":[221],"edit":[222],"effort.":[223],"also":[227],"helped":[228],"identify":[229],"issues":[230],"matrix.":[235],"CONCLUSIONS:":[236],"low-barrier":[245],"effective":[247,260],"for":[249],"extracting":[250],"values":[252],"when":[261],"self-contained.":[265],"make":[269],"less":[273],"self-contained":[274],"challenge":[275],"automated":[276,286],"extraction":[277],"biodiversity":[281],"hinder":[284],"reuse":[287],"knowledge.":[291],"will":[294],"updated":[296],"new":[299],"requirements":[300],"revealed":[301],"this":[303],"case":[304],"study.":[305]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":11},{"year":2017,"cited_by_count":2},{"year":2013,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
