{"id":"https://openalex.org/W2529746041","doi":"https://doi.org/10.1186/s12859-016-1273-5","title":"Handling missing rows in multi-omics data integration: multiple imputation in multiple factor analysis framework","display_name":"Handling missing rows in multi-omics data integration: multiple imputation in multiple factor analysis framework","publication_year":2016,"publication_date":"2016-10-03","ids":{"openalex":"https://openalex.org/W2529746041","doi":"https://doi.org/10.1186/s12859-016-1273-5","mag":"2529746041","pmid":"https://pubmed.ncbi.nlm.nih.gov/27716030"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-1273-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1273-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1273-5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1273-5","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030920948","display_name":"Valentin Voillet","orcid":"https://orcid.org/0000-0002-5751-3881"},"institutions":[{"id":"https://openalex.org/I176063091","display_name":"\u00c9cole Nationale V\u00e9t\u00e9rinaire de Toulouse","ror":"https://ror.org/03m3gzv89","country_code":"FR","type":"education","lineage":["https://openalex.org/I176063091","https://openalex.org/I4210117091"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I205747304","display_name":"Institut National Polytechnique de Toulouse","ror":"https://ror.org/033p9g875","country_code":"FR","type":"education","lineage":["https://openalex.org/I205747304"]},{"id":"https://openalex.org/I4210154939","display_name":"G\u00e9n\u00e9tique Physiologie et Syst\u00e8mes d'Elevage","ror":"https://ror.org/04gg6ne93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I176063091","https://openalex.org/I205747304","https://openalex.org/I4210088668","https://openalex.org/I4210117091","https://openalex.org/I4210154939"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Valentin Voillet","raw_affiliation_strings":["Universit\u00e9 de Toulouse, INRA, INPT, INP-ENVT, UMR1388, GenPhySE, Castanet-Tolosan, F-31326, France","GenPhySE  - G\u00e9n\u00e9tique Physiologie et Syst\u00e8mes d'Elevage (INRA Auzeville - \r\n24, chemin de Borde-Rouge -\r\nAuzeville Tolosane\r\n31326 Castanet Tolosan\r\n - France)","Toulouse INP - Institut National Polytechnique (Toulouse) (France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 de Toulouse, INRA, INPT, INP-ENVT, UMR1388, GenPhySE, Castanet-Tolosan, F-31326, France","institution_ids":["https://openalex.org/I176063091","https://openalex.org/I17866349","https://openalex.org/I205747304","https://openalex.org/I4210154939"]},{"raw_affiliation_string":"GenPhySE  - G\u00e9n\u00e9tique Physiologie et Syst\u00e8mes d'Elevage (INRA Auzeville - \r\n24, chemin de Borde-Rouge -\r\nAuzeville Tolosane\r\n31326 Castanet Tolosan\r\n - France)","institution_ids":["https://openalex.org/I4210154939"]},{"raw_affiliation_string":"Toulouse INP - Institut National Polytechnique (Toulouse) (France)","institution_ids":["https://openalex.org/I205747304"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110930427","display_name":"Philippe Besse","orcid":null},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I196454796","display_name":"Institut National des Sciences Appliqu\u00e9es de Toulouse","ror":"https://ror.org/01h8pf755","country_code":"FR","type":"education","lineage":["https://openalex.org/I196454796"]},{"id":"https://openalex.org/I84500057","display_name":"Institut de Math\u00e9matiques de Toulouse","ror":"https://ror.org/014vp6c30","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I196454796","https://openalex.org/I4210092408","https://openalex.org/I4210126056","https://openalex.org/I4210141950","https://openalex.org/I4210152422","https://openalex.org/I4405258862","https://openalex.org/I84500057"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Philippe Besse","raw_affiliation_strings":["Universit\u00e9 de Toulouse INSA, UMR5219 Institut de Math\u00e9matiques, Toulouse, F-31077, France","IMT - Institut de Math\u00e9matiques de Toulouse UMR5219 (UPS IMT, F-31062 Toulouse Cedex 9, \r\nINSA Toulouse, F-31077 Toulouse,\r\nFrance UT1, F-31042 Toulouse, \r\nFrance UT2, F-31058 Toulouse,\r\n\r\nT\u00e9l\u00e9phone : 05.61.55.67.90 - France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 de Toulouse INSA, UMR5219 Institut de Math\u00e9matiques, Toulouse, F-31077, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I84500057"]},{"raw_affiliation_string":"IMT - Institut de Math\u00e9matiques de Toulouse UMR5219 (UPS IMT, F-31062 Toulouse Cedex 9, \r\nINSA Toulouse, F-31077 Toulouse,\r\nFrance UT1, F-31042 Toulouse, \r\nFrance UT2, F-31058 Toulouse,\r\n\r\nT\u00e9l\u00e9phone : 05.61.55.67.90 - France)","institution_ids":["https://openalex.org/I134560555","https://openalex.org/I196454796","https://openalex.org/I84500057"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051096924","display_name":"Laurence Liaubet","orcid":"https://orcid.org/0000-0003-0201-0264"},"institutions":[{"id":"https://openalex.org/I176063091","display_name":"\u00c9cole Nationale V\u00e9t\u00e9rinaire de Toulouse","ror":"https://ror.org/03m3gzv89","country_code":"FR","type":"education","lineage":["https://openalex.org/I176063091","https://openalex.org/I4210117091"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I205747304","display_name":"Institut National Polytechnique de Toulouse","ror":"https://ror.org/033p9g875","country_code":"FR","type":"education","lineage":["https://openalex.org/I205747304"]},{"id":"https://openalex.org/I4210154939","display_name":"G\u00e9n\u00e9tique Physiologie et Syst\u00e8mes d'Elevage","ror":"https://ror.org/04gg6ne93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I176063091","https://openalex.org/I205747304","https://openalex.org/I4210088668","https://openalex.org/I4210117091","https://openalex.org/I4210154939"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Laurence Liaubet","raw_affiliation_strings":["Universit\u00e9 de Toulouse, INRA, INPT, INP-ENVT, UMR1388, GenPhySE, Castanet-Tolosan, F-31326, France","GenPhySE  - G\u00e9n\u00e9tique Physiologie et Syst\u00e8mes d'Elevage (INRA Auzeville - \r\n24, chemin de Borde-Rouge -\r\nAuzeville Tolosane\r\n31326 Castanet Tolosan\r\n - France)","Toulouse INP - Institut National Polytechnique (Toulouse) (France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 de Toulouse, INRA, INPT, INP-ENVT, UMR1388, GenPhySE, Castanet-Tolosan, F-31326, France","institution_ids":["https://openalex.org/I176063091","https://openalex.org/I17866349","https://openalex.org/I205747304","https://openalex.org/I4210154939"]},{"raw_affiliation_string":"GenPhySE  - G\u00e9n\u00e9tique Physiologie et Syst\u00e8mes d'Elevage (INRA Auzeville - \r\n24, chemin de Borde-Rouge -\r\nAuzeville Tolosane\r\n31326 Castanet Tolosan\r\n - France)","institution_ids":["https://openalex.org/I4210154939"]},{"raw_affiliation_string":"Toulouse INP - Institut National Polytechnique (Toulouse) (France)","institution_ids":["https://openalex.org/I205747304"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110947242","display_name":"Magali San Cristobal","orcid":null},"institutions":[{"id":"https://openalex.org/I134560555","display_name":"Universit\u00e9 Toulouse III - Paul Sabatier","ror":"https://ror.org/02v6kpv12","country_code":"FR","type":"education","lineage":["https://openalex.org/I134560555"]},{"id":"https://openalex.org/I176063091","display_name":"\u00c9cole Nationale V\u00e9t\u00e9rinaire de Toulouse","ror":"https://ror.org/03m3gzv89","country_code":"FR","type":"education","lineage":["https://openalex.org/I176063091","https://openalex.org/I4210117091"]},{"id":"https://openalex.org/I17866349","display_name":"Universit\u00e9 F\u00e9d\u00e9rale de Toulouse Midi-Pyr\u00e9n\u00e9es","ror":"https://ror.org/004raaa70","country_code":"FR","type":"education","lineage":["https://openalex.org/I17866349"]},{"id":"https://openalex.org/I196454796","display_name":"Institut National des Sciences Appliqu\u00e9es de Toulouse","ror":"https://ror.org/01h8pf755","country_code":"FR","type":"education","lineage":["https://openalex.org/I196454796"]},{"id":"https://openalex.org/I205747304","display_name":"Institut National Polytechnique de Toulouse","ror":"https://ror.org/033p9g875","country_code":"FR","type":"education","lineage":["https://openalex.org/I205747304"]},{"id":"https://openalex.org/I4210154939","display_name":"G\u00e9n\u00e9tique Physiologie et Syst\u00e8mes d'Elevage","ror":"https://ror.org/04gg6ne93","country_code":"FR","type":"facility","lineage":["https://openalex.org/I176063091","https://openalex.org/I205747304","https://openalex.org/I4210088668","https://openalex.org/I4210117091","https://openalex.org/I4210154939"]},{"id":"https://openalex.org/I84500057","display_name":"Institut de Math\u00e9matiques de Toulouse","ror":"https://ror.org/014vp6c30","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I196454796","https://openalex.org/I4210092408","https://openalex.org/I4210126056","https://openalex.org/I4210141950","https://openalex.org/I4210152422","https://openalex.org/I4405258862","https://openalex.org/I84500057"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Magali San Cristobal","raw_affiliation_strings":["Universit\u00e9 de Toulouse INSA, UMR5219 Institut de Math\u00e9matiques, Toulouse, F-31077, France","Universit\u00e9 de Toulouse, INRA, INPT, INP-ENVT, UMR1388, GenPhySE, Castanet-Tolosan, F-31326, France","GenPhySE  - G\u00e9n\u00e9tique Physiologie et Syst\u00e8mes d'Elevage (INRA Auzeville - \r\n24, chemin de Borde-Rouge -\r\nAuzeville Tolosane\r\n31326 Castanet Tolosan\r\n - France)","IMT - Institut de Math\u00e9matiques de Toulouse UMR5219 (UPS IMT, F-31062 Toulouse Cedex 9, \r\nINSA Toulouse, F-31077 Toulouse,\r\nFrance UT1, F-31042 Toulouse, \r\nFrance UT2, F-31058 Toulouse,\r\n\r\nT\u00e9l\u00e9phone : 05.61.55.67.90 - France)","Toulouse INP - Institut National Polytechnique (Toulouse) (France)"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universit\u00e9 de Toulouse INSA, UMR5219 Institut de Math\u00e9matiques, Toulouse, F-31077, France","institution_ids":["https://openalex.org/I17866349","https://openalex.org/I84500057"]},{"raw_affiliation_string":"Universit\u00e9 de Toulouse, INRA, INPT, INP-ENVT, UMR1388, GenPhySE, Castanet-Tolosan, F-31326, France","institution_ids":["https://openalex.org/I176063091","https://openalex.org/I17866349","https://openalex.org/I205747304","https://openalex.org/I4210154939"]},{"raw_affiliation_string":"GenPhySE  - G\u00e9n\u00e9tique Physiologie et Syst\u00e8mes d'Elevage (INRA Auzeville - \r\n24, chemin de Borde-Rouge -\r\nAuzeville Tolosane\r\n31326 Castanet Tolosan\r\n - France)","institution_ids":["https://openalex.org/I4210154939"]},{"raw_affiliation_string":"IMT - Institut de Math\u00e9matiques de Toulouse UMR5219 (UPS IMT, F-31062 Toulouse Cedex 9, \r\nINSA Toulouse, F-31077 Toulouse,\r\nFrance UT1, F-31042 Toulouse, \r\nFrance UT2, F-31058 Toulouse,\r\n\r\nT\u00e9l\u00e9phone : 05.61.55.67.90 - France)","institution_ids":["https://openalex.org/I134560555","https://openalex.org/I196454796","https://openalex.org/I84500057"]},{"raw_affiliation_string":"Toulouse INP - Institut National Polytechnique (Toulouse) (France)","institution_ids":["https://openalex.org/I205747304"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5107341630","display_name":"Ignacio Gonz\u00e1lez","orcid":"https://orcid.org/0000-0003-3432-6909"},"institutions":[{"id":"https://openalex.org/I4210102957","display_name":"D\u00e9partement math\u00e9matiques, informatique, sciences de la donn\u00e9e et technologies du num\u00e9rique","ror":"https://ror.org/011emb038","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210088668","https://openalex.org/I4210102957"]},{"id":"https://openalex.org/I4387153087","display_name":"Math\u00e9matiques et Informatique Appliqu\u00e9es","ror":"https://ror.org/00780az30","country_code":null,"type":"facility","lineage":["https://openalex.org/I22248866","https://openalex.org/I277688954","https://openalex.org/I277688954","https://openalex.org/I4210088668","https://openalex.org/I4387153087"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Ignacio Gonz\u00e1lez","raw_affiliation_strings":["INRAUR875 Math\u00e9matiques et Informatiques Appliqu\u00e9es, F-31326, Castanet-Tolosan, France. Ignacio.Gonzalez@toulouse.inra.fr","MIAT INRA - Unit\u00e9 de Math\u00e9matiques et Informatique Appliqu\u00e9es de Toulouse (Chemin de Borde Rouge, 31320 Castanet Tolosan - France)"],"raw_orcid":"https://orcid.org/0000-0003-3432-6909","affiliations":[{"raw_affiliation_string":"INRAUR875 Math\u00e9matiques et Informatiques Appliqu\u00e9es, F-31326, Castanet-Tolosan, France. Ignacio.Gonzalez@toulouse.inra.fr","institution_ids":["https://openalex.org/I4210102957"]},{"raw_affiliation_string":"MIAT INRA - Unit\u00e9 de Math\u00e9matiques et Informatique Appliqu\u00e9es de Toulouse (Chemin de Borde Rouge, 31320 Castanet Tolosan - France)","institution_ids":["https://openalex.org/I4210102957","https://openalex.org/I4387153087"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5107341630"],"corresponding_institution_ids":["https://openalex.org/I4210102957","https://openalex.org/I4387153087"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":3.9519,"has_fulltext":true,"cited_by_count":65,"citation_normalized_percentile":{"value":0.94044956,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"17","issue":"1","first_page":"402","last_page":"402"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10243","display_name":"Statistical Methods and Bayesian Inference","score":0.09969999641180038,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10243","display_name":"Statistical Methods and Bayesian Inference","score":0.09969999641180038,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10845","display_name":"Advanced Causal Inference Techniques","score":0.09239999949932098,"subfield":{"id":"https://openalex.org/subfields/2613","display_name":"Statistics and Probability"},"field":{"id":"https://openalex.org/fields/26","display_name":"Mathematics"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13283","display_name":"Mental Health Research Topics","score":0.08089999854564667,"subfield":{"id":"https://openalex.org/subfields/3205","display_name":"Experimental and Cognitive Psychology"},"field":{"id":"https://openalex.org/fields/32","display_name":"Psychology"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/missing-data","display_name":"Missing data","score":0.8908917903900146},{"id":"https://openalex.org/keywords/imputation","display_name":"Imputation (statistics)","score":0.8341212272644043},{"id":"https://openalex.org/keywords/row","display_name":"Row","score":0.7615182399749756},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5920984745025635},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5436162352561951},{"id":"https://openalex.org/keywords/row-and-column-spaces","display_name":"Row and column spaces","score":0.416675865650177},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.32189661264419556},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.26567018032073975},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.20258411765098572}],"concepts":[{"id":"https://openalex.org/C9357733","wikidata":"https://www.wikidata.org/wiki/Q6878417","display_name":"Missing data","level":2,"score":0.8908917903900146},{"id":"https://openalex.org/C58041806","wikidata":"https://www.wikidata.org/wiki/Q1660484","display_name":"Imputation (statistics)","level":3,"score":0.8341212272644043},{"id":"https://openalex.org/C135598885","wikidata":"https://www.wikidata.org/wiki/Q1366302","display_name":"Row","level":2,"score":0.7615182399749756},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5920984745025635},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5436162352561951},{"id":"https://openalex.org/C104140500","wikidata":"https://www.wikidata.org/wiki/Q2088159","display_name":"Row and column spaces","level":3,"score":0.416675865650177},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.32189661264419556},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.26567018032073975},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.20258411765098572},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000082","descriptor_name":"Acetaminophen","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D000082","descriptor_name":"Acetaminophen","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D000082","descriptor_name":"Acetaminophen","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003627","descriptor_name":"Data Interpretation, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005163","descriptor_name":"Factor Analysis, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005163","descriptor_name":"Factor Analysis, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005163","descriptor_name":"Factor Analysis, Statistical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014407","descriptor_name":"Tumor Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014407","descriptor_name":"Tumor Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014407","descriptor_name":"Tumor Cells, Cultured","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015203","descriptor_name":"Reproducibility of Results","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015999","descriptor_name":"Multivariate Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015999","descriptor_name":"Multivariate Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015999","descriptor_name":"Multivariate Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017208","descriptor_name":"Rats, Wistar","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017208","descriptor_name":"Rats, Wistar","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017208","descriptor_name":"Rats, Wistar","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018712","descriptor_name":"Analgesics, Non-Narcotic","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D018712","descriptor_name":"Analgesics, Non-Narcotic","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D018712","descriptor_name":"Analgesics, Non-Narcotic","qualifier_ui":"Q000633","qualifier_name":"toxicity","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000209","qualifier_name":"etiology","is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000209","qualifier_name":"etiology","is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000209","qualifier_name":"etiology","is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false},{"descriptor_ui":"D056486","descriptor_name":"Chemical and Drug Induced Liver Injury","qualifier_ui":"Q000473","qualifier_name":"pathology","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-016-1273-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1273-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1273-5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27716030","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27716030","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:HAL:hal-01957574v1","is_oa":false,"landing_page_url":"https://hal.archives-ouvertes.fr/hal-01957574","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 1471-2105","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:HAL:hal-02636549v1","is_oa":false,"landing_page_url":"https://hal.inrae.fr/hal-02636549","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"https://bmcbioinformatics.biomedcentral.com/","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:5048483","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5048483","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-1273-5","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1273-5","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1273-5","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320323910","display_name":"Institut National de la Recherche Agronomique","ror":"https://ror.org/01x3gbx83"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2529746041.pdf","grobid_xml":"https://content.openalex.org/works/W2529746041.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W6917172","https://openalex.org/W29779864","https://openalex.org/W33507944","https://openalex.org/W78449534","https://openalex.org/W1536282935","https://openalex.org/W1550443206","https://openalex.org/W1963991144","https://openalex.org/W1964529181","https://openalex.org/W1984407408","https://openalex.org/W2000578192","https://openalex.org/W2007770989","https://openalex.org/W2043246077","https://openalex.org/W2043795468","https://openalex.org/W2044758663","https://openalex.org/W2060502430","https://openalex.org/W2069087665","https://openalex.org/W2073231699","https://openalex.org/W2096391232","https://openalex.org/W2097453652","https://openalex.org/W2100358124","https://openalex.org/W2102252264","https://openalex.org/W2103196126","https://openalex.org/W2109033574","https://openalex.org/W2116781287","https://openalex.org/W2118502261","https://openalex.org/W2125321800","https://openalex.org/W2153947402","https://openalex.org/W2162313689","https://openalex.org/W2165386352","https://openalex.org/W2170376772","https://openalex.org/W2293385408","https://openalex.org/W2329290504","https://openalex.org/W2480680997","https://openalex.org/W2582743722","https://openalex.org/W2996558561","https://openalex.org/W4300187280","https://openalex.org/W4301518628"],"related_works":["https://openalex.org/W2181530120","https://openalex.org/W4211215373","https://openalex.org/W2024529227","https://openalex.org/W2055961818","https://openalex.org/W2903115227","https://openalex.org/W1574575415","https://openalex.org/W3144172081","https://openalex.org/W3179858851","https://openalex.org/W3028371478","https://openalex.org/W2081476516"],"abstract_inverted_index":{"BACKGROUND:":[0],"In":[1,59],"omics":[2,138],"data":[3,23,196,313],"integration":[4],"studies,":[5],"it":[6],"is":[7,95],"common,":[8],"for":[9,14,283],"a":[10,50,56,70,121,198,278],"variety":[11],"of":[12,78,109,111,130,146,182,243,252,287,322,334],"reasons,":[13],"some":[15],"individuals":[16,288,308],"to":[17,30,41,72,98,102,119,225,232,262,301,337],"not":[18],"be":[19,38,338],"present":[20],"in":[21,55,90,267,311],"all":[22],"tables.":[24,314],"Missing":[25],"row":[26],"values":[27,234],"are":[28,117],"challenging":[29],"deal":[31],"with":[32,86,143,158,249],"because":[33],"most":[34],"statistical":[35,270],"methods":[36],"cannot":[37],"directly":[39],"applied":[40,97],"incomplete":[42],"datasets.":[43,93,139],"To":[44],"overcome":[45],"this":[46,60],"issue,":[47],"we":[48,62],"propose":[49],"multiple":[51,65,76],"imputation":[52,170],"(MI)":[53],"approach":[54],"multivariate":[57],"framework.":[58],"study,":[61],"focus":[63],"on":[64,135,289],"factor":[66],"analysis":[67],"(MFA)":[68],"as":[69],"tool":[71],"compare":[73],"and":[74,167,197,222,227,245,257,280],"integrate":[75],"layers":[77],"information.":[79],"MI":[80],"involves":[81],"filling":[82],"the":[83,114,128,180,183,188,194,204,212,229,241,250,264,268,285,290,302,320,327,332,335],"missing":[84,233,253,295,310,328],"rows":[85],"plausible":[87],"values,":[88],"resulting":[89,175],"M":[91,104,115],"completed":[92,100],"MFA":[94,165,190,292],"then":[96],"each":[99,173],"dataset":[101],"produce":[103],"different":[105,144],"configurations":[106,116,209,298,324],"(the":[107],"matrices":[108],"coordinates":[110,286],"individuals).":[112],"Finally,":[113],"combined":[118],"yield":[120],"single":[122],"consensus":[123],"solution.":[124],"RESULTS:":[125],"We":[126,238,273],"assessed":[127],"performance":[129],"our":[131],"method,":[132],"named":[133],"MI-MFA,":[134],"two":[136,159],"real":[137],"Incomplete":[140],"artificial":[141],"datasets":[142],"patterns":[145],"missingness":[147],"were":[148,156,235,299,309],"created":[149],"from":[150,176,193,211],"these":[151,177],"data.":[152],"The":[153],"MI-MFA":[154,265,276,297,323],"results":[155,336],"compared":[157],"other":[160],"approaches":[161,218],"i.e.,":[162,219],"regularized":[163],"iterative":[164],"(RI-MFA)":[166],"mean":[168],"variable":[169],"(MVI-MFA).":[171],"For":[172],"configuration":[174,191,214,304],"three":[178],"strategies,":[179],"suitability":[181],"solution":[184],"was":[185,215,260],"determined":[186],"against":[187],"true":[189,213,303],"obtained":[192],"original":[195],"comprehensive":[199],"graphical":[200],"comparison":[201],"showing":[202],"how":[203,240],"MI-,":[205],"RI-":[206],"or":[207],"MVI-MFA":[208],"diverge":[210],"produced.":[216],"Two":[217],"confidence":[220],"ellipses":[221,244],"convex":[223,246],"hulls,":[224],"visualize":[226],"assess":[228],"uncertainty":[230,321],"due":[231],"also":[236],"described.":[237],"showed":[239],"areas":[242],"hulls":[247],"increased":[248],"number":[251],"individuals.":[254],"A":[255],"free":[256],"easy-to-use":[258],"code":[259],"proposed":[261],"implement":[263],"method":[266,282,316],"R":[269],"environment.":[271],"CONCLUSIONS:":[272],"believe":[274],"that":[275],"provides":[277],"useful":[279],"attractive":[281],"estimating":[284],"first":[291],"components":[293],"despite":[294],"rows.":[296],"close":[300],"even":[305],"when":[306],"many":[307],"several":[312],"This":[315],"takes":[317],"into":[318],"account":[319],"induced":[325],"by":[326],"rows,":[329],"thereby":[330],"allowing":[331],"reliability":[333],"evaluated.":[339]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":4}],"updated_date":"2026-07-28T07:46:37.118299","created_date":"2025-10-10T00:00:00"}
