{"id":"https://openalex.org/W2516918633","doi":"https://doi.org/10.1186/s12859-016-1233-0","title":"Comparative analysis of housekeeping and tissue-specific driver nodes in human protein interaction networks","display_name":"Comparative analysis of housekeeping and tissue-specific driver nodes in human protein interaction networks","publication_year":2016,"publication_date":"2016-09-09","ids":{"openalex":"https://openalex.org/W2516918633","doi":"https://doi.org/10.1186/s12859-016-1233-0","mag":"2516918633","pmid":"https://pubmed.ncbi.nlm.nih.gov/27612563"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-1233-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1233-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1233-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1233-0","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100447043","display_name":"Xiao-Fei Zhang","orcid":"https://orcid.org/0000-0002-5052-9725"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiao-Fei Zhang","raw_affiliation_strings":["School of Mathematics and Statistics & Hubei Key Laboratory of Mathematical Sciences, Central China Normal University, Luoyu Road, Wuhan, 430079, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics and Statistics & Hubei Key Laboratory of Mathematical Sciences, Central China Normal University, Luoyu Road, Wuhan, 430079, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5030129372","display_name":"Le Ou-Yang","orcid":"https://orcid.org/0000-0003-4007-4568"},"institutions":[{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Le Ou-Yang","raw_affiliation_strings":["College of Information Engineering, Shenzhen University, Nanhai Ave 3688, Shenzhen, 518060, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Information Engineering, Shenzhen University, Nanhai Ave 3688, Shenzhen, 518060, China","institution_ids":["https://openalex.org/I180726961"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102004642","display_name":"Dao\u2010Qing Dai","orcid":"https://orcid.org/0000-0003-4622-8492"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Dao-Qing Dai","raw_affiliation_strings":["Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Xingang West Road, Guangzhou, 510275, China. stsddq@mail.sysu.edu.cn","Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Xingang West Road, Guangzhou, 510275, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Xingang West Road, Guangzhou, 510275, China. stsddq@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Xingang West Road, Guangzhou, 510275, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031082473","display_name":"Mengyun Wu","orcid":"https://orcid.org/0000-0002-0970-4712"},"institutions":[{"id":"https://openalex.org/I181679659","display_name":"Shanghai University of Finance and Economics","ror":"https://ror.org/00wtvfq62","country_code":"CN","type":"education","lineage":["https://openalex.org/I181679659"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Meng-Yun Wu","raw_affiliation_strings":["School of Statistics and Management, Shanghai University of Finance and Economics, Guoding Road, Shanghai, 200433, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Statistics and Management, Shanghai University of Finance and Economics, Guoding Road, Shanghai, 200433, China","institution_ids":["https://openalex.org/I181679659"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046009262","display_name":"Yuan Zhu","orcid":"https://orcid.org/0000-0003-1372-9135"},"institutions":[{"id":"https://openalex.org/I3124059619","display_name":"China University of Geosciences","ror":"https://ror.org/04gcegc37","country_code":"CN","type":"education","lineage":["https://openalex.org/I3124059619"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yuan Zhu","raw_affiliation_strings":["School of Automation, China University of Geosciences, Lumo Road, Wuhan, 430074, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Automation, China University of Geosciences, Lumo Road, Wuhan, 430074, China","institution_ids":["https://openalex.org/I3124059619"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100644375","display_name":"Hong Yan","orcid":"https://orcid.org/0000-0001-9661-3095"},"institutions":[{"id":"https://openalex.org/I168719708","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23","country_code":"HK","type":"education","lineage":["https://openalex.org/I168719708"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Hong Yan","raw_affiliation_strings":["Department of Electronic and Engineering, City University of Hong Kong, Tat Chee Avenue, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic and Engineering, City University of Hong Kong, Tat Chee Avenue, Hong Kong, China","institution_ids":["https://openalex.org/I168719708"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5102004642"],"corresponding_institution_ids":["https://openalex.org/I157773358"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.2827,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.80754769,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"17","issue":"1","first_page":"358","last_page":"358"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9914000034332275,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.0008999999845400453,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13526","display_name":"14-3-3 protein interactions","score":0.000699999975040555,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6503024697303772},{"id":"https://openalex.org/keywords/housekeeping-gene","display_name":"Housekeeping gene","score":0.5797780156135559},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.48908907175064087},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.48527905344963074},{"id":"https://openalex.org/keywords/housekeeping","display_name":"Housekeeping","score":0.43049874901771545},{"id":"https://openalex.org/keywords/interaction-network","display_name":"Interaction network","score":0.42622923851013184},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.42414528131484985},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4101969003677368},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.366770476102829},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.28955256938934326},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.18474769592285156}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6503024697303772},{"id":"https://openalex.org/C33922130","wikidata":"https://www.wikidata.org/wiki/Q419232","display_name":"Housekeeping gene","level":4,"score":0.5797780156135559},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.48908907175064087},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.48527905344963074},{"id":"https://openalex.org/C90861158","wikidata":"https://www.wikidata.org/wiki/Q708514","display_name":"Housekeeping","level":3,"score":0.43049874901771545},{"id":"https://openalex.org/C55105296","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interaction network","level":3,"score":0.42622923851013184},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.42414528131484985},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4101969003677368},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.366770476102829},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.28955256938934326},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.18474769592285156},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000375","descriptor_name":"Aging","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000375","descriptor_name":"Aging","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000375","descriptor_name":"Aging","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008962","descriptor_name":"Models, Theoretical","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009369","descriptor_name":"Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009928","descriptor_name":"Organ Specificity","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011499","descriptor_name":"Protein Processing, Post-Translational","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014780","descriptor_name":"Viruses","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020043","descriptor_name":"Genes, Essential","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020043","descriptor_name":"Genes, Essential","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020043","descriptor_name":"Genes, Essential","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D063990","descriptor_name":"Gene Ontology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-016-1233-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1233-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1233-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27612563","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27612563","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3984952","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/5016887","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/402fdea7-d609-461d-9621-355295d6bc9b","is_oa":true,"landing_page_url":"https://hdl.handle.net/2031/402fdea7-d609-461d-9621-355295d6bc9b","pdf_url":null,"source":{"id":"https://openalex.org/S7407055387","display_name":"CityU Scholars","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Zhang, X-F, Ou-Yang, L, Dai, D-Q, Wu, M-Y, Zhu, Y & Yan, H 2016, 'Comparative analysis of housekeeping and tissue-specific driver nodes in human protein interaction networks', BMC Bioinformatics, vol. 17, no. 1, 358. https://doi.org/10.1186/s12859-016-1233-0","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-1233-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1233-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1233-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1267278675","display_name":null,"funder_award_id":"11401110","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G3002491232","display_name":null,"funder_award_id":"20120171110016","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G3010105402","display_name":null,"funder_award_id":"CCNU15ZD011","funder_id":"https://openalex.org/F4320323173","funder_display_name":"Central China Normal University"},{"id":"https://openalex.org/G367910934","display_name":null,"funder_award_id":"61402276","funder_id":"https://openalex.org/F4320324781","funder_display_name":"Shanghai University of Finance and Economics"},{"id":"https://openalex.org/G5180900016","display_name":null,"funder_award_id":"IRT13077","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5544774543","display_name":null,"funder_award_id":"61402276","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G660828770","display_name":null,"funder_award_id":"61375033","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7128375257","display_name":null,"funder_award_id":"11171354","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7470892521","display_name":null,"funder_award_id":"11401110","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7534660035","display_name":null,"funder_award_id":"61402190","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7604058285","display_name":null,"funder_award_id":"61375033","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7673123307","display_name":null,"funder_award_id":"2013KJCX0086","funder_id":"https://openalex.org/F4320321921","funder_display_name":"Natural Science Foundation of Guangdong Province"},{"id":"https://openalex.org/G804469284","display_name":null,"funder_award_id":"S2013020012796","funder_id":"https://openalex.org/F4320321921","funder_display_name":"Natural Science Foundation of Guangdong Province"},{"id":"https://openalex.org/G8295545977","display_name":null,"funder_award_id":"11631015","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8601434852","display_name":null,"funder_award_id":"IRT13077","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321106","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934"},{"id":"https://openalex.org/F4320321921","display_name":"Natural Science Foundation of Guangdong Province","ror":null},{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"},{"id":"https://openalex.org/F4320323173","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21"},{"id":"https://openalex.org/F4320324781","display_name":"Shanghai University of Finance and Economics","ror":"https://ror.org/00wtvfq62"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2516918633.pdf","grobid_xml":"https://content.openalex.org/works/W2516918633.grobid-xml"},"referenced_works_count":86,"referenced_works":["https://openalex.org/W1011540006","https://openalex.org/W1505893511","https://openalex.org/W1581252656","https://openalex.org/W1700570096","https://openalex.org/W1931400479","https://openalex.org/W1950194999","https://openalex.org/W1956657636","https://openalex.org/W1971937094","https://openalex.org/W1975119263","https://openalex.org/W1978695171","https://openalex.org/W1981409633","https://openalex.org/W1989827738","https://openalex.org/W1991961848","https://openalex.org/W2002582122","https://openalex.org/W2010457001","https://openalex.org/W2011353204","https://openalex.org/W2012034410","https://openalex.org/W2012643478","https://openalex.org/W2015802360","https://openalex.org/W2016763316","https://openalex.org/W2017814498","https://openalex.org/W2018570668","https://openalex.org/W2021505154","https://openalex.org/W2029158589","https://openalex.org/W2030205108","https://openalex.org/W2036568936","https://openalex.org/W2038985700","https://openalex.org/W2042586732","https://openalex.org/W2042759697","https://openalex.org/W2045362835","https://openalex.org/W2056499061","https://openalex.org/W2057616220","https://openalex.org/W2061528014","https://openalex.org/W2062533676","https://openalex.org/W2067658227","https://openalex.org/W2069860553","https://openalex.org/W2070575931","https://openalex.org/W2078008084","https://openalex.org/W2081375228","https://openalex.org/W2088590769","https://openalex.org/W2090386832","https://openalex.org/W2091364465","https://openalex.org/W2094124219","https://openalex.org/W2095334215","https://openalex.org/W2096180769","https://openalex.org/W2098979213","https://openalex.org/W2101420429","https://openalex.org/W2101735923","https://openalex.org/W2103017472","https://openalex.org/W2105813236","https://openalex.org/W2109488005","https://openalex.org/W2116609981","https://openalex.org/W2116868464","https://openalex.org/W2116988471","https://openalex.org/W2117949279","https://openalex.org/W2118089467","https://openalex.org/W2119114096","https://openalex.org/W2119412782","https://openalex.org/W2122992061","https://openalex.org/W2123703699","https://openalex.org/W2129137060","https://openalex.org/W2130790725","https://openalex.org/W2140453812","https://openalex.org/W2140883620","https://openalex.org/W2143892509","https://openalex.org/W2149780759","https://openalex.org/W2152124140","https://openalex.org/W2156201868","https://openalex.org/W2158217645","https://openalex.org/W2158485828","https://openalex.org/W2163480486","https://openalex.org/W2164683872","https://openalex.org/W2165487280","https://openalex.org/W2166898290","https://openalex.org/W2167898988","https://openalex.org/W2169382766","https://openalex.org/W2192310960","https://openalex.org/W2261598201","https://openalex.org/W2270868069","https://openalex.org/W2328838412","https://openalex.org/W2331416186","https://openalex.org/W2915667579","https://openalex.org/W3140207494","https://openalex.org/W4210290733","https://openalex.org/W4240374930","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2028359308","https://openalex.org/W2512481868","https://openalex.org/W1541391621","https://openalex.org/W2056890978","https://openalex.org/W2602058515","https://openalex.org/W2782714379","https://openalex.org/W2016751415","https://openalex.org/W2594201224","https://openalex.org/W2376115766","https://openalex.org/W4388869614"],"abstract_inverted_index":{"BACKGROUND:":[0],"Several":[1],"recent":[2],"studies":[3,56],"have":[4,186],"used":[5],"the":[6,18,21,47,64,96,120,134,163,258,308],"Minimum":[7,87],"Dominating":[8,88],"Set":[9,89],"(MDS)":[10],"model":[11,91,122],"to":[12,42,123,127,211,228,253],"identify":[13],"driver":[14,51],"nodes,":[15],"which":[16,44,92,168],"provide":[17],"control":[19],"of":[20,50,99,165,215,261,292,307,310],"underlying":[22],"networks,":[23,201],"in":[24,34,167,198,283],"protein":[25,108,199,238],"interaction":[26,200],"networks.":[27],"There":[28],"may":[29],"exist":[30],"multiple":[31],"MDS":[32,129,149,153,158,175],"configurations":[33],"a":[35,85,212,300,304],"given":[36],"network,":[37],"thus":[38],"it":[39,138],"is":[40,139,299],"difficult":[41],"determine":[43],"one":[45],"represents":[46],"real":[48],"set":[49],"nodes.":[52],"Because":[53],"these":[54],"previous":[55],"only":[57],"focus":[58],"on":[59,67,162],"static":[60,107],"networks":[61,112],"and":[62,106,156,172,183,190,209,237,278,295,298],"ignore":[63],"contextual":[65],"information":[66],"particular":[68],"tissues,":[69],"their":[70],"findings":[71],"could":[72],"be":[73,77],"insufficient":[74],"or":[75],"even":[76],"misleading.":[78],"RESULTS:":[79],"In":[80,145],"this":[81],"study,":[82],"we":[83,147,178,241],"develop":[84],"Collective-Influence-corrected":[86],"(CI-MDS)":[90],"takes":[93],"into":[94,151],"account":[95],"collective":[97],"influence":[98],"proteins.":[100,130,176,220],"By":[101],"integrating":[102],"molecular":[103],"expression":[104],"profiles":[105],"interactions,":[109],"16":[110],"tissue-specific":[111,125],"are":[113,170,195,250],"established":[114],"as":[115,174],"well.":[116],"We":[117],"then":[118],"apply":[119],"CI-MDS":[121],"each":[124],"network":[126],"detect":[128],"It":[131],"generates":[132],"almost":[133],"same":[135],"MDSs":[136],"when":[137],"solved":[140],"using":[141],"different":[142,188],"optimization":[143],"algorithms.":[144],"addition,":[146],"classify":[148],"proteins":[150,155,160,182,185,194,225,249,271,280,294],"Tissue-Specific":[152],"(TS-MDS)":[154],"HouseKeeping":[157],"(HK-MDS)":[159],"based":[161],"number":[164,214],"tissues":[166],"they":[169],"expressed":[171],"identified":[173],"Notably,":[177],"find":[179,242],"that":[180,243,269],"TS-MDS":[181,219,222,248,279,293],"HK-MDS":[184,193,224,245,270,296],"significantly":[187,226],"topological":[189],"functional":[191,265],"properties.":[192],"more":[196,204,207],"central":[197],"associated":[202],"with":[203],"functions,":[205],"evolving":[206],"slowly":[208],"subjected":[210],"greater":[213],"post-translational":[216],"modifications":[217],"than":[218],"Unlike":[221],"proteins,":[223,234,246,297],"correspond":[227],"essential":[229],"genes,":[230,232,256],"ageing":[231],"virus-targeted":[233],"transcription":[235],"factors":[236],"kinases.":[239],"Moreover,":[240],"besides":[244],"many":[247],"also":[251],"linked":[252],"disease":[254],"related":[255],"suggesting":[257],"tissue":[259],"specificity":[260],"human":[262,311],"diseases.":[263],"Furthermore,":[264],"enrichment":[266],"analysis":[267],"reveals":[268],"carry":[272],"out":[273],"universally":[274],"necessary":[275],"biological":[276],"processes":[277],"usually":[281],"involve":[282],"tissue-dependent":[284],"functions.":[285],"CONCLUSIONS:":[286],"Our":[287],"study":[288],"uncovers":[289],"key":[290],"features":[291],"step":[301],"forward":[302],"towards":[303],"better":[305],"understanding":[306],"controllability":[309],"interactomes.":[312]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
