{"id":"https://openalex.org/W2515300444","doi":"https://doi.org/10.1186/s12859-016-1186-3","title":"A scalable assembly-free variable selection algorithm for biomarker discovery from metagenomes","display_name":"A scalable assembly-free variable selection algorithm for biomarker discovery from metagenomes","publication_year":2016,"publication_date":"2016-08-19","ids":{"openalex":"https://openalex.org/W2515300444","doi":"https://doi.org/10.1186/s12859-016-1186-3","mag":"2515300444","pmid":"https://pubmed.ncbi.nlm.nih.gov/27542753"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-1186-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1186-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1186-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1186-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5058646013","display_name":"Anestis Gkanogiannis","orcid":"https://orcid.org/0000-0002-6441-0688"},"institutions":[{"id":"https://openalex.org/I4210113668","display_name":"Direction de la Recherche Fondamentale","ror":"https://ror.org/01yvj5k91","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Anestis Gkanogiannis","raw_affiliation_strings":["Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Fondamentale, Institut de G\u00e9nomique, Genoscope, Evry, Essonne, 91057, France","UMR 8030 - G\u00e9nomique M\u00e9tabolique, Centre National de la Recherche Scientifique, Evry, Essonne, 91057, France","Universit\u00e9 d'Evry-Val-d'Essonne & Universit\u00e9 Paris-Saclay, Evry, Essonne, 91000, France"],"affiliations":[{"raw_affiliation_string":"Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Fondamentale, Institut de G\u00e9nomique, Genoscope, Evry, Essonne, 91057, France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210113668","https://openalex.org/I4210115028"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique M\u00e9tabolique, Centre National de la Recherche Scientifique, Evry, Essonne, 91057, France","institution_ids":[]},{"raw_affiliation_string":"Universit\u00e9 d'Evry-Val-d'Essonne & Universit\u00e9 Paris-Saclay, Evry, Essonne, 91000, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021608885","display_name":"St\u00e9phane Gazut","orcid":null},"institutions":[{"id":"https://openalex.org/I4210117989","display_name":"Direction de la Recherche Technologique","ror":"https://ror.org/02ggzyd20","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I4210117989"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210085861","display_name":"Laboratoire d'Int\u00e9gration des Syst\u00e8mes et des Technologies","ror":"https://ror.org/000dbcc61","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210085861","https://openalex.org/I4210117989"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"St\u00e9phane Gazut","raw_affiliation_strings":["Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Technologique, CEA-Tech, LIST, Laboratoire d'Analyse de Donn\u00e9es et Intelligence des Syst\u00e8mes, 91191, Gif-sur-Yvette, France"],"affiliations":[{"raw_affiliation_string":"Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Technologique, CEA-Tech, LIST, Laboratoire d'Analyse de Donn\u00e9es et Intelligence des Syst\u00e8mes, 91191, Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210117989","https://openalex.org/I4210085861"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000482521","display_name":"Marcel Salanoubat","orcid":"https://orcid.org/0000-0003-1132-6455"},"institutions":[{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]},{"id":"https://openalex.org/I4210115028","display_name":"Genoscope","ror":"https://ror.org/028pnqf58","country_code":"FR","type":"facility","lineage":["https://openalex.org/I4210115028"]},{"id":"https://openalex.org/I4210113668","display_name":"Direction de la Recherche Fondamentale","ror":"https://ror.org/01yvj5k91","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I4210113668"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Marcel Salanoubat","raw_affiliation_strings":["Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Fondamentale, Institut de G\u00e9nomique, Genoscope, Evry, Essonne, 91057, France","UMR 8030 - G\u00e9nomique M\u00e9tabolique, Centre National de la Recherche Scientifique, Evry, Essonne, 91057, France","Universit\u00e9 d'Evry-Val-d'Essonne & Universit\u00e9 Paris-Saclay, Evry, Essonne, 91000, France"],"affiliations":[{"raw_affiliation_string":"Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Fondamentale, Institut de G\u00e9nomique, Genoscope, Evry, Essonne, 91057, France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210113668","https://openalex.org/I4210115028"]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique M\u00e9tabolique, Centre National de la Recherche Scientifique, Evry, Essonne, 91057, France","institution_ids":[]},{"raw_affiliation_string":"Universit\u00e9 d'Evry-Val-d'Essonne & Universit\u00e9 Paris-Saclay, Evry, Essonne, 91000, France","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077134332","display_name":"Sawsan Kanj","orcid":null},"institutions":[{"id":"https://openalex.org/I4210117989","display_name":"Direction de la Recherche Technologique","ror":"https://ror.org/02ggzyd20","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I4210117989"]},{"id":"https://openalex.org/I4210085861","display_name":"Laboratoire d'Int\u00e9gration des Syst\u00e8mes et des Technologies","ror":"https://ror.org/000dbcc61","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I277688954","https://openalex.org/I4210085861","https://openalex.org/I4210117989"]},{"id":"https://openalex.org/I2738703131","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55","country_code":"FR","type":"government","lineage":["https://openalex.org/I2738703131"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sawsan Kanj","raw_affiliation_strings":["Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Technologique, CEA-Tech, LIST, Laboratoire d'Analyse de Donn\u00e9es et Intelligence des Syst\u00e8mes, 91191, Gif-sur-Yvette, France"],"affiliations":[{"raw_affiliation_string":"Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Technologique, CEA-Tech, LIST, Laboratoire d'Analyse de Donn\u00e9es et Intelligence des Syst\u00e8mes, 91191, Gif-sur-Yvette, France","institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210117989","https://openalex.org/I4210085861"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5107913769","display_name":"Thomas Br\u00fcls","orcid":null},"institutions":[{"id":"https://openalex.org/I4210085925","display_name":"Centre National de Recherche en G\u00e9nomique Humaine","ror":"https://ror.org/004yvsb77","country_code":"FR","type":"facility","lineage":["https://openalex.org/I2738703131","https://openalex.org/I2738703131","https://openalex.org/I4210085925","https://openalex.org/I4210113668","https://openalex.org/I4405259120"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Thomas Br\u00fcls","raw_affiliation_strings":["Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Fondamentale, Institut de G\u00e9nomique, Genoscope, Evry, Essonne, 91057, France. bruls@genoscope.cns.fr","UMR 8030 - G\u00e9nomique M\u00e9tabolique, Centre National de la Recherche Scientifique, Evry, Essonne, 91057, France. bruls@genoscope.cns.fr","Universit\u00e9 d'Evry-Val-d'Essonne & Universit\u00e9 Paris-Saclay, Evry, Essonne, 91000, France. bruls@genoscope.cns.fr","UMR 8030 \u2013 G\u00e9nomique M\u00e9tabolique, Centre National de la Recherche Scientifique, Evry, Essonne, 91057, France"],"affiliations":[{"raw_affiliation_string":"Commissariat \u00e0 l'Energie Atomique et aux Energies Alternatives, Direction de la Recherche Fondamentale, Institut de G\u00e9nomique, Genoscope, Evry, Essonne, 91057, France. bruls@genoscope.cns.fr","institution_ids":[]},{"raw_affiliation_string":"UMR 8030 - G\u00e9nomique M\u00e9tabolique, Centre National de la Recherche Scientifique, Evry, Essonne, 91057, France. bruls@genoscope.cns.fr","institution_ids":[]},{"raw_affiliation_string":"Universit\u00e9 d'Evry-Val-d'Essonne & Universit\u00e9 Paris-Saclay, Evry, Essonne, 91000, France. bruls@genoscope.cns.fr","institution_ids":[]},{"raw_affiliation_string":"UMR 8030 \u2013 G\u00e9nomique M\u00e9tabolique, Centre National de la Recherche Scientifique, Evry, Essonne, 91057, France","institution_ids":["https://openalex.org/I4210085925"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5058646013"],"corresponding_institution_ids":["https://openalex.org/I2738703131","https://openalex.org/I4210113668","https://openalex.org/I4210115028"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.356,"has_fulltext":true,"cited_by_count":13,"citation_normalized_percentile":{"value":0.81827025,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":97},"biblio":{"volume":"17","issue":"1","first_page":"311","last_page":"311"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9959999918937683,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5633343458175659},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.5465436577796936},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5459957122802734},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5199785828590393},{"id":"https://openalex.org/keywords/biomarker-discovery","display_name":"Biomarker discovery","score":0.5149986743927002},{"id":"https://openalex.org/keywords/biomarker","display_name":"Biomarker","score":0.4730968773365021},{"id":"https://openalex.org/keywords/scalability","display_name":"Scalability","score":0.47108399868011475},{"id":"https://openalex.org/keywords/feature-selection","display_name":"Feature selection","score":0.45332661271095276},{"id":"https://openalex.org/keywords/variable","display_name":"Variable (mathematics)","score":0.4495674967765808},{"id":"https://openalex.org/keywords/algorithm","display_name":"Algorithm","score":0.38143759965896606},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3411024510860443},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3383294343948364},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3373819589614868},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.2736227512359619},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2503426671028137},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.22045913338661194},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20362693071365356},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.19516274333000183},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.07571813464164734},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.0754777193069458}],"concepts":[{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5633343458175659},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.5465436577796936},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5459957122802734},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5199785828590393},{"id":"https://openalex.org/C124535831","wikidata":"https://www.wikidata.org/wiki/Q4915074","display_name":"Biomarker discovery","level":4,"score":0.5149986743927002},{"id":"https://openalex.org/C2781197716","wikidata":"https://www.wikidata.org/wiki/Q864574","display_name":"Biomarker","level":2,"score":0.4730968773365021},{"id":"https://openalex.org/C48044578","wikidata":"https://www.wikidata.org/wiki/Q727490","display_name":"Scalability","level":2,"score":0.47108399868011475},{"id":"https://openalex.org/C148483581","wikidata":"https://www.wikidata.org/wiki/Q446488","display_name":"Feature selection","level":2,"score":0.45332661271095276},{"id":"https://openalex.org/C182365436","wikidata":"https://www.wikidata.org/wiki/Q50701","display_name":"Variable (mathematics)","level":2,"score":0.4495674967765808},{"id":"https://openalex.org/C11413529","wikidata":"https://www.wikidata.org/wiki/Q8366","display_name":"Algorithm","level":1,"score":0.38143759965896606},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3411024510860443},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3383294343948364},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3373819589614868},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.2736227512359619},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2503426671028137},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.22045913338661194},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20362693071365356},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.19516274333000183},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.07571813464164734},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.0754777193069458},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D015415","descriptor_name":"Biomarkers","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D064307","descriptor_name":"Microbiota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D066264","descriptor_name":"Datasets as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-016-1186-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1186-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1186-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27542753","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27542753","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:HAL:hal-01868694v1","is_oa":true,"landing_page_url":"https://hal.science/hal-01868694","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics, 2016, 17 (1), pp.311. ⟨10.1186/s12859-016-1186-3⟩","raw_type":"Journal articles"},{"id":"pmh:oai:HAL:hal-04417851v1","is_oa":false,"landing_page_url":"https://hal.science/hal-04417851","pdf_url":null,"source":{"id":"https://openalex.org/S4406922466","display_name":"SPIRE - Sciences Po Institutional REpository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 1471-2105","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4992282","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4992282","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-1186-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1186-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1186-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8471126735","display_name":null,"funder_award_id":"Programme \"Technologies pour la Sant\u00e9\" / Projet Meta-Target","funder_id":"https://openalex.org/F4320323911","funder_display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives"}],"funders":[{"id":"https://openalex.org/F4320323911","display_name":"Commissariat \u00e0 l'\u00c9nergie Atomique et aux \u00c9nergies Alternatives","ror":"https://ror.org/00jjx8s55"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2515300444.pdf","grobid_xml":"https://content.openalex.org/works/W2515300444.grobid-xml"},"referenced_works_count":21,"referenced_works":["https://openalex.org/W26356079","https://openalex.org/W1967713838","https://openalex.org/W1997673861","https://openalex.org/W2001561488","https://openalex.org/W2010002522","https://openalex.org/W2022986961","https://openalex.org/W2040948088","https://openalex.org/W2071841602","https://openalex.org/W2094890728","https://openalex.org/W2103901746","https://openalex.org/W2112364185","https://openalex.org/W2121291798","https://openalex.org/W2125826054","https://openalex.org/W2138615112","https://openalex.org/W2148181108","https://openalex.org/W2150208009","https://openalex.org/W2156247618","https://openalex.org/W2159591897","https://openalex.org/W2159954944","https://openalex.org/W2212407137","https://openalex.org/W2344899722"],"related_works":["https://openalex.org/W112583468","https://openalex.org/W96119380","https://openalex.org/W2943300910","https://openalex.org/W4298030740","https://openalex.org/W3023706879","https://openalex.org/W4246773350","https://openalex.org/W2108949684","https://openalex.org/W1965976436","https://openalex.org/W2012655824","https://openalex.org/W4389571046"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":2}],"updated_date":"2026-03-14T08:43:22.919905","created_date":"2025-10-10T00:00:00"}