{"id":"https://openalex.org/W2471029679","doi":"https://doi.org/10.1186/s12859-016-1141-3","title":"Profiling networks of distinct immune-cells in tumors","display_name":"Profiling networks of distinct immune-cells in tumors","publication_year":2016,"publication_date":"2016-07-04","ids":{"openalex":"https://openalex.org/W2471029679","doi":"https://doi.org/10.1186/s12859-016-1141-3","mag":"2471029679","pmid":"https://pubmed.ncbi.nlm.nih.gov/27377892"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-1141-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1141-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-016-1141-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-016-1141-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084114891","display_name":"Trevor Clancy","orcid":"https://orcid.org/0000-0001-9896-0613"},"institutions":[{"id":"https://openalex.org/I1281400175","display_name":"Oslo University Hospital","ror":"https://ror.org/00j9c2840","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I1281400175"]},{"id":"https://openalex.org/I2801049993","display_name":"Norwegian Cancer Society","ror":"https://ror.org/01925vb10","country_code":"NO","type":"nonprofit","lineage":["https://openalex.org/I2801049993"]}],"countries":["NO"],"is_corresponding":true,"raw_author_name":"Trevor Clancy","raw_affiliation_strings":["Department of Cancer Immunology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway. trevor.clancy@rr-research.no","Department of Tumor Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway. trevor.clancy@rr-research.no","Department of Tumor Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway"],"raw_orcid":"https://orcid.org/0000-0001-9896-0613","affiliations":[{"raw_affiliation_string":"Department of Cancer Immunology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway. trevor.clancy@rr-research.no","institution_ids":["https://openalex.org/I2801049993"]},{"raw_affiliation_string":"Department of Tumor Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway. trevor.clancy@rr-research.no","institution_ids":["https://openalex.org/I2801049993"]},{"raw_affiliation_string":"Department of Tumor Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway","institution_ids":["https://openalex.org/I1281400175"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5083493986","display_name":"Eivind Hovig","orcid":"https://orcid.org/0000-0002-9103-1077"},"institutions":[{"id":"https://openalex.org/I1281400175","display_name":"Oslo University Hospital","ror":"https://ror.org/00j9c2840","country_code":"NO","type":"healthcare","lineage":["https://openalex.org/I1281400175"]},{"id":"https://openalex.org/I184942183","display_name":"University of Oslo","ror":"https://ror.org/01xtthb56","country_code":"NO","type":"education","lineage":["https://openalex.org/I184942183"]},{"id":"https://openalex.org/I2801049993","display_name":"Norwegian Cancer Society","ror":"https://ror.org/01925vb10","country_code":"NO","type":"nonprofit","lineage":["https://openalex.org/I2801049993"]}],"countries":["NO"],"is_corresponding":false,"raw_author_name":"Eivind Hovig","raw_affiliation_strings":["Biomedical Research Group, Department of Informatics, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo, Norway","Department of Tumor Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway","Institute of Cancer Genetics and Informatics, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Biomedical Research Group, Department of Informatics, Faculty of Mathematics and Natural Sciences, University of Oslo, Oslo, Norway","institution_ids":["https://openalex.org/I184942183"]},{"raw_affiliation_string":"Department of Tumor Biology, Institute for Cancer Research, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway","institution_ids":["https://openalex.org/I1281400175"]},{"raw_affiliation_string":"Institute of Cancer Genetics and Informatics, The Norwegian Radium Hospital, Oslo University Hospital, Oslo, Norway","institution_ids":["https://openalex.org/I2801049993"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5084114891"],"corresponding_institution_ids":["https://openalex.org/I1281400175","https://openalex.org/I2801049993"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.7091,"has_fulltext":true,"cited_by_count":23,"citation_normalized_percentile":{"value":0.86070204,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"17","issue":"1","first_page":"263","last_page":"263"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10158","display_name":"Cancer Immunotherapy and Biomarkers","score":0.47589999437332153,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10158","display_name":"Cancer Immunotherapy and Biomarkers","score":0.47589999437332153,"subfield":{"id":"https://openalex.org/subfields/2730","display_name":"Oncology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.1054999977350235,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.08229999989271164,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/immune-system","display_name":"Immune system","score":0.8658413887023926},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6174702644348145},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.4764987826347351},{"id":"https://openalex.org/keywords/cell-type","display_name":"Cell type","score":0.4689804017543793},{"id":"https://openalex.org/keywords/gene-signature","display_name":"Gene signature","score":0.45490795373916626},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.437541127204895},{"id":"https://openalex.org/keywords/immune-checkpoint","display_name":"Immune checkpoint","score":0.4338015615940094},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.4320725202560425},{"id":"https://openalex.org/keywords/immunotherapy","display_name":"Immunotherapy","score":0.37102800607681274},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3632444739341736},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.33368980884552},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20632442831993103},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.18220952153205872},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11013805866241455}],"concepts":[{"id":"https://openalex.org/C8891405","wikidata":"https://www.wikidata.org/wiki/Q1059","display_name":"Immune system","level":2,"score":0.8658413887023926},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6174702644348145},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.4764987826347351},{"id":"https://openalex.org/C189014844","wikidata":"https://www.wikidata.org/wiki/Q189118","display_name":"Cell type","level":3,"score":0.4689804017543793},{"id":"https://openalex.org/C2779733811","wikidata":"https://www.wikidata.org/wiki/Q5531562","display_name":"Gene signature","level":4,"score":0.45490795373916626},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.437541127204895},{"id":"https://openalex.org/C2780851360","wikidata":"https://www.wikidata.org/wiki/Q21686041","display_name":"Immune checkpoint","level":4,"score":0.4338015615940094},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.4320725202560425},{"id":"https://openalex.org/C2777701055","wikidata":"https://www.wikidata.org/wiki/Q1427096","display_name":"Immunotherapy","level":3,"score":0.37102800607681274},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3632444739341736},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.33368980884552},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20632442831993103},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.18220952153205872},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11013805866241455}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007107","descriptor_name":"Immune System","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D007107","descriptor_name":"Immune System","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D007107","descriptor_name":"Immune System","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D007107","descriptor_name":"Immune System","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007107","descriptor_name":"Immune System","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D007107","descriptor_name":"Immune System","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000556","qualifier_name":"secondary","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000556","qualifier_name":"secondary","is_major_topic":false},{"descriptor_ui":"D008545","descriptor_name":"Melanoma","qualifier_ui":"Q000556","qualifier_name":"secondary","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D009154","descriptor_name":"Mutation","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020558","descriptor_name":"GTP Phosphohydrolases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020558","descriptor_name":"GTP Phosphohydrolases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020558","descriptor_name":"GTP Phosphohydrolases","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020935","descriptor_name":"MAP Kinase Signaling System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020935","descriptor_name":"MAP Kinase Signaling System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020935","descriptor_name":"MAP Kinase Signaling System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D048493","descriptor_name":"Proto-Oncogene Proteins B-raf","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D048493","descriptor_name":"Proto-Oncogene Proteins B-raf","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D048493","descriptor_name":"Proto-Oncogene Proteins B-raf","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-016-1141-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1141-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-016-1141-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27377892","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27377892","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3904123","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4932723","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:www.duo.uio.no:10852/50563","is_oa":true,"landing_page_url":"http://hdl.handle.net/10852/50563","pdf_url":null,"source":{"id":"https://openalex.org/S4306401716","display_name":"Duo Research Archive (University of Oslo)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I184942183","host_organization_name":"University of Oslo","host_organization_lineage":["https://openalex.org/I184942183"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-1141-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1141-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-016-1141-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320310758","display_name":"Kreftforeningen","ror":"https://ror.org/01925vb10"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2471029679.pdf","grobid_xml":"https://content.openalex.org/works/W2471029679.grobid-xml"},"referenced_works_count":88,"referenced_works":["https://openalex.org/W1107917109","https://openalex.org/W1551281263","https://openalex.org/W1833854866","https://openalex.org/W1840551444","https://openalex.org/W1859257957","https://openalex.org/W1901759988","https://openalex.org/W1923943509","https://openalex.org/W1944707476","https://openalex.org/W1965827638","https://openalex.org/W1966107523","https://openalex.org/W1967937330","https://openalex.org/W1967954493","https://openalex.org/W1975170514","https://openalex.org/W1981178993","https://openalex.org/W1985987855","https://openalex.org/W1988391018","https://openalex.org/W1990209583","https://openalex.org/W1993604578","https://openalex.org/W1994488319","https://openalex.org/W1994596411","https://openalex.org/W1995234326","https://openalex.org/W1997163824","https://openalex.org/W2001621827","https://openalex.org/W2003402062","https://openalex.org/W2007219269","https://openalex.org/W2009202987","https://openalex.org/W2027061207","https://openalex.org/W2031659092","https://openalex.org/W2032166347","https://openalex.org/W2037723794","https://openalex.org/W2037900813","https://openalex.org/W2046972425","https://openalex.org/W2049491375","https://openalex.org/W2054991211","https://openalex.org/W2055411568","https://openalex.org/W2063080163","https://openalex.org/W2068302554","https://openalex.org/W2068409497","https://openalex.org/W2070477528","https://openalex.org/W2071180234","https://openalex.org/W2072367332","https://openalex.org/W2073218792","https://openalex.org/W2073839391","https://openalex.org/W2076910098","https://openalex.org/W2087690546","https://openalex.org/W2102382685","https://openalex.org/W2102988949","https://openalex.org/W2105459360","https://openalex.org/W2106631163","https://openalex.org/W2111510610","https://openalex.org/W2117513900","https://openalex.org/W2118258530","https://openalex.org/W2120426523","https://openalex.org/W2120865735","https://openalex.org/W2130430382","https://openalex.org/W2130542755","https://openalex.org/W2131884978","https://openalex.org/W2132390180","https://openalex.org/W2133075384","https://openalex.org/W2134878419","https://openalex.org/W2138936980","https://openalex.org/W2140802251","https://openalex.org/W2142300779","https://openalex.org/W2144642115","https://openalex.org/W2145619229","https://openalex.org/W2148811436","https://openalex.org/W2149011343","https://openalex.org/W2150770343","https://openalex.org/W2150892663","https://openalex.org/W2150932450","https://openalex.org/W2154270347","https://openalex.org/W2154788828","https://openalex.org/W2156007395","https://openalex.org/W2158197251","https://openalex.org/W2159203162","https://openalex.org/W2163935562","https://openalex.org/W2164281389","https://openalex.org/W2165232124","https://openalex.org/W2168496689","https://openalex.org/W2169083371","https://openalex.org/W2169766729","https://openalex.org/W2170282880","https://openalex.org/W2209812019","https://openalex.org/W2282819656","https://openalex.org/W2409473205","https://openalex.org/W4239469437","https://openalex.org/W4240689716","https://openalex.org/W6664417227"],"related_works":["https://openalex.org/W1840542775","https://openalex.org/W2416830231","https://openalex.org/W179926425","https://openalex.org/W3003578468","https://openalex.org/W3029386772","https://openalex.org/W2336657400","https://openalex.org/W3159716479","https://openalex.org/W2086883243","https://openalex.org/W2088351705","https://openalex.org/W3093899576"],"abstract_inverted_index":{"BACKGROUND:":[0],"It":[1],"is":[2,13,25,50,176],"now":[3],"clearly":[4],"evident":[5],"that":[6,212],"cancer":[7],"outcome":[8],"and":[9,40,138,159,163,171,193,218],"response":[10,233],"to":[11,26,80,117,179,199,234,243,250],"therapy":[12],"guided":[14],"by":[15,132],"diverse":[16],"immune-cell":[17,32,69,82,99,113,123,184,222],"activity":[18],"in":[19,35,169,182,197,203,223,231],"tumors.":[20],"Presently,":[21],"a":[22,240],"key":[23],"challenge":[24],"comprehensively":[27],"identify":[28],"networks":[29,65,139,165,185],"of":[30,44,66,97,112,121,129,135,140,166,186,220,247],"distinct":[31,68,122,136,167,221,248],"signatures":[33,134,217,246],"present":[34],"complex":[36],"tissue,":[37],"at":[38,41,71],"higher-resolution":[39],"various":[42],"stages":[43],"differentiation,":[45],"activation":[46],"or":[47],"function.":[48],"This":[49,105,207,236],"particularly":[51],"so":[52],"for":[53],"closely":[54],"related":[55],"immune-cells":[56,168,249],"with":[57,110],"diminutive,":[58],"yet":[59],"critical,":[60],"differences.":[61],"RESULTS:":[62],"To":[63],"predict":[64],"infiltrated":[67],"phenotypes":[70],"higher":[72],"resolution,":[73],"we":[74],"explored":[75],"an":[76,94,228],"integrated":[77,109],"knowledge-based":[78,106],"approach":[79,107,131,175,210],"select":[81],"signature":[83,100,119],"genes":[84,101,120],"integrating":[85],"not":[86],"only":[87],"expression":[88],"enrichment":[89],"across":[90],"immune-cells,":[91,137,141],"but":[92],"also":[93,177],"automatic":[95],"capture":[96,180],"relevant":[98],"from":[102,142,156],"the":[103,127,183,194,214,224],"literature.":[104],"was":[108],"resources":[111],"specific":[114],"protein":[115,215],"networks,":[116],"define":[118,244],"phenotypes.":[124],"We":[125],"demonstrate":[126],"utility":[128],"this":[130],"profiling":[133],"metastatic":[143,191],"melanoma":[144],"patients":[145],"who":[146],"had":[147],"undergone":[148],"chemotherapy.":[149],"The":[150,174],"resultant":[151],"bioinformatics":[152,209],"strategy":[153,242],"complements":[154],"immunohistochemistry":[155],"these":[157],"tumors,":[158],"predicts":[160],"both":[161],"tumor-killing":[162],"immunosuppressive":[164],"responders":[170],"non-responders,":[172],"respectively.":[173],"shown":[178],"differences":[181],"BRAF":[187],"versus":[188],"NRAS":[189],"mutated":[190],"melanomas,":[192],"dynamic":[195],"changes":[196],"resistance":[198],"targeted":[200],"kinase":[201],"inhibitors":[202],"MAPK":[204],"signalling.":[205],"CONCLUSIONS:":[206],"integrative":[208],"demonstrates":[211],"capturing":[213],"network":[216,245],"ratios":[219],"tumor":[225],"microenvironment":[226],"maybe":[227],"important":[229],"factor":[230],"predicting":[232],"therapy.":[235],"may":[237],"serve":[238],"as":[239],"computational":[241],"guide":[251],"immuno-pathological":[252],"discovery.":[253]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":3}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
