{"id":"https://openalex.org/W2498503359","doi":"https://doi.org/10.1186/s12859-016-1129-z","title":"Integrating unified medical language system and association mining techniques into relevance feedback for biomedical literature search","display_name":"Integrating unified medical language system and association mining techniques into relevance feedback for biomedical literature search","publication_year":2016,"publication_date":"2016-07-01","ids":{"openalex":"https://openalex.org/W2498503359","doi":"https://doi.org/10.1186/s12859-016-1129-z","mag":"2498503359","pmid":"https://pubmed.ncbi.nlm.nih.gov/27453982"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-1129-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1129-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1129-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1129-z","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013999546","display_name":"Yanqing Ji","orcid":"https://orcid.org/0000-0002-6063-0827"},"institutions":[{"id":"https://openalex.org/I119888943","display_name":"Gonzaga University","ror":"https://ror.org/03ze70h02","country_code":"US","type":"education","lineage":["https://openalex.org/I119888943"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Yanqing Ji","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Gonzaga University, Spokane, WA, USA. ji@gonzaga.edu","Department of Electrical and Computer Engineering, Gonzaga University, Spokane, WA, USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Gonzaga University, Spokane, WA, USA. ji@gonzaga.edu","institution_ids":[]},{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Gonzaga University, Spokane, WA, USA","institution_ids":["https://openalex.org/I119888943"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082640513","display_name":"Hao Ying","orcid":"https://orcid.org/0000-0002-4891-6785"},"institutions":[{"id":"https://openalex.org/I185443292","display_name":"Wayne State University","ror":"https://ror.org/01070mq45","country_code":"US","type":"education","lineage":["https://openalex.org/I185443292"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hao Ying","raw_affiliation_strings":["Department of Electrical and Computer Engineering, Wayne State University, Detroit, MI, USA"],"affiliations":[{"raw_affiliation_string":"Department of Electrical and Computer Engineering, Wayne State University, Detroit, MI, USA","institution_ids":["https://openalex.org/I185443292"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088006001","display_name":"John C. Tran","orcid":"https://orcid.org/0000-0003-1697-9404"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"John Tran","raw_affiliation_strings":["Frontier Behavioral Health, Spokane, WA, USA"],"affiliations":[{"raw_affiliation_string":"Frontier Behavioral Health, Spokane, WA, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014004794","display_name":"Peter Dews","orcid":null},"institutions":[{"id":"https://openalex.org/I1339176976","display_name":"Mercy Medical Center","ror":"https://ror.org/009raxq57","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1339176976"]},{"id":"https://openalex.org/I4210166159","display_name":"Mercy Hospital","ror":"https://ror.org/05rsdqb94","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I2801024494","https://openalex.org/I4210166159"]},{"id":"https://openalex.org/I4210115245","display_name":"St. Mary Mercy Livonia","ror":"https://ror.org/020whm440","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210115245"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Peter Dews","raw_affiliation_strings":["Department of Medicine, St. Mary Mercy Hospital, Livonia, MI, USA"],"affiliations":[{"raw_affiliation_string":"Department of Medicine, St. Mary Mercy Hospital, Livonia, MI, USA","institution_ids":["https://openalex.org/I4210115245","https://openalex.org/I4210166159","https://openalex.org/I1339176976"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5008013450","display_name":"R. Michael Massanari","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"R. Michael Massanari","raw_affiliation_strings":["Research for The Critical Junctures Institute, Bellingham, WA, USA"],"affiliations":[{"raw_affiliation_string":"Research for The Critical Junctures Institute, Bellingham, WA, USA","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5013999546"],"corresponding_institution_ids":["https://openalex.org/I119888943"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":0.8703,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.76688807,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"17","issue":"S9","first_page":"264","last_page":"264"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/unified-medical-language-system","display_name":"Unified Medical Language System","score":0.8559512495994568},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.802947998046875},{"id":"https://openalex.org/keywords/relevance-feedback","display_name":"Relevance feedback","score":0.7970141172409058},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.7838826179504395},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.7349715232849121},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.6121482253074646},{"id":"https://openalex.org/keywords/association","display_name":"Association (psychology)","score":0.5267730951309204},{"id":"https://openalex.org/keywords/association-rule-learning","display_name":"Association rule learning","score":0.48642992973327637},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.4614402651786804},{"id":"https://openalex.org/keywords/controlled-vocabulary","display_name":"Controlled vocabulary","score":0.432447224855423},{"id":"https://openalex.org/keywords/biomedical-text-mining","display_name":"Biomedical text mining","score":0.4232610762119293},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.40509268641471863},{"id":"https://openalex.org/keywords/text-mining","display_name":"Text mining","score":0.3014289140701294},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.17360076308250427},{"id":"https://openalex.org/keywords/image-retrieval","display_name":"Image retrieval","score":0.1347200870513916}],"concepts":[{"id":"https://openalex.org/C69505689","wikidata":"https://www.wikidata.org/wiki/Q455338","display_name":"Unified Medical Language System","level":2,"score":0.8559512495994568},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.802947998046875},{"id":"https://openalex.org/C2779532271","wikidata":"https://www.wikidata.org/wiki/Q445558","display_name":"Relevance feedback","level":4,"score":0.7970141172409058},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.7838826179504395},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.7349715232849121},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.6121482253074646},{"id":"https://openalex.org/C142853389","wikidata":"https://www.wikidata.org/wiki/Q744778","display_name":"Association (psychology)","level":2,"score":0.5267730951309204},{"id":"https://openalex.org/C193524817","wikidata":"https://www.wikidata.org/wiki/Q386780","display_name":"Association rule learning","level":2,"score":0.48642992973327637},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.4614402651786804},{"id":"https://openalex.org/C110615152","wikidata":"https://www.wikidata.org/wiki/Q1469824","display_name":"Controlled vocabulary","level":2,"score":0.432447224855423},{"id":"https://openalex.org/C165141518","wikidata":"https://www.wikidata.org/wiki/Q4915126","display_name":"Biomedical text mining","level":3,"score":0.4232610762119293},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.40509268641471863},{"id":"https://openalex.org/C71472368","wikidata":"https://www.wikidata.org/wiki/Q676880","display_name":"Text mining","level":2,"score":0.3014289140701294},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.17360076308250427},{"id":"https://openalex.org/C1667742","wikidata":"https://www.wikidata.org/wiki/Q10927554","display_name":"Image retrieval","level":3,"score":0.1347200870513916},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005246","descriptor_name":"Feedback","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005246","descriptor_name":"Feedback","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005246","descriptor_name":"Feedback","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008513","descriptor_name":"Medicine in Literature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008513","descriptor_name":"Medicine in Literature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008513","descriptor_name":"Medicine in Literature","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017432","descriptor_name":"Unified Medical Language System","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D057386","descriptor_name":"Search Engine","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/s12859-016-1129-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1129-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1129-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27453982","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27453982","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3931785","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4959361","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-1129-z","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1129-z","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1129-z","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.8199999928474426,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2498503359.pdf","grobid_xml":"https://content.openalex.org/works/W2498503359.grobid-xml"},"referenced_works_count":37,"referenced_works":["https://openalex.org/W96003883","https://openalex.org/W116520325","https://openalex.org/W143961815","https://openalex.org/W1065780816","https://openalex.org/W1484413656","https://openalex.org/W1525672751","https://openalex.org/W1563486531","https://openalex.org/W1565377632","https://openalex.org/W1601564520","https://openalex.org/W1868865885","https://openalex.org/W1981852586","https://openalex.org/W1983798833","https://openalex.org/W1992381544","https://openalex.org/W1998491255","https://openalex.org/W2000672666","https://openalex.org/W2009202077","https://openalex.org/W2021581601","https://openalex.org/W2078251464","https://openalex.org/W2086173776","https://openalex.org/W2102297485","https://openalex.org/W2103776471","https://openalex.org/W2104017387","https://openalex.org/W2119458544","https://openalex.org/W2122402213","https://openalex.org/W2127581560","https://openalex.org/W2129526767","https://openalex.org/W2133680018","https://openalex.org/W2134979673","https://openalex.org/W2144594967","https://openalex.org/W2151356080","https://openalex.org/W2157602407","https://openalex.org/W2158300770","https://openalex.org/W2162708814","https://openalex.org/W2237748339","https://openalex.org/W2482589566","https://openalex.org/W4212848460","https://openalex.org/W4247027719"],"related_works":["https://openalex.org/W2509297716","https://openalex.org/W1508778694","https://openalex.org/W138082899","https://openalex.org/W2114373757","https://openalex.org/W2159583324","https://openalex.org/W2036729745","https://openalex.org/W2010487328","https://openalex.org/W2052511096","https://openalex.org/W125725911","https://openalex.org/W2061714289"],"abstract_inverted_index":{"With":[0],"UMLS":[1],"and":[2],"association":[3],"mining":[4],"techniques,":[5],"BiomedSearch":[6],"can":[7],"effectively":[8],"utilize":[9],"users'":[10],"relevance":[11],"feedback":[12],"to":[13],"improve":[14],"the":[15],"performance":[16],"of":[17],"biomedical":[18],"literature":[19],"search.":[20]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":2}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
