{"id":"https://openalex.org/W2343517537","doi":"https://doi.org/10.1186/s12859-016-1054-1","title":"Construction of dynamic probabilistic protein interaction networks for protein complex identification","display_name":"Construction of dynamic probabilistic protein interaction networks for protein complex identification","publication_year":2016,"publication_date":"2016-04-27","ids":{"openalex":"https://openalex.org/W2343517537","doi":"https://doi.org/10.1186/s12859-016-1054-1","mag":"2343517537","pmid":"https://pubmed.ncbi.nlm.nih.gov/27117946"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-1054-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1054-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-016-1054-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-016-1054-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046020427","display_name":"Yijia Zhang","orcid":"https://orcid.org/0000-0002-5843-4675"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]},{"id":"https://openalex.org/I4210092944","display_name":"Dalian University","ror":"https://ror.org/00g2ypp58","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210092944"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yijia Zhang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China. zhyj@dlut.edu.cn","College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China. zhyj@dlut.edu.cn","institution_ids":["https://openalex.org/I27357992","https://openalex.org/I4210092944"]},{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023931221","display_name":"Hongfei Lin","orcid":"https://orcid.org/0000-0003-0872-7688"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongfei Lin","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051597671","display_name":"Zhihao Yang","orcid":"https://orcid.org/0000-0001-6186-2024"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Zhihao Yang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China","institution_ids":["https://openalex.org/I27357992"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100370493","display_name":"Jian Wang","orcid":"https://orcid.org/0000-0002-8116-7691"},"institutions":[{"id":"https://openalex.org/I27357992","display_name":"Dalian University of Technology","ror":"https://ror.org/023hj5876","country_code":"CN","type":"education","lineage":["https://openalex.org/I27357992"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian Wang","raw_affiliation_strings":["College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Computer Science and Technology, Dalian University of Technology, Dalian, Liaoning, 116023, China","institution_ids":["https://openalex.org/I27357992"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5046020427"],"corresponding_institution_ids":["https://openalex.org/I27357992","https://openalex.org/I4210092944"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":1.4428,"has_fulltext":true,"cited_by_count":35,"citation_normalized_percentile":{"value":0.81759164,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"17","issue":"1","first_page":"186","last_page":"186"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9902999997138977,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13127","display_name":"Biotin and Related Studies","score":0.002099999925121665,"subfield":{"id":"https://openalex.org/subfields/1307","display_name":"Cell Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10621","display_name":"Gene Regulatory Network Analysis","score":0.0010000000474974513,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7030389904975891},{"id":"https://openalex.org/keywords/probabilistic-logic","display_name":"Probabilistic logic","score":0.6828582286834717},{"id":"https://openalex.org/keywords/construct","display_name":"Construct (python library)","score":0.558613657951355},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.5489903688430786},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5075094103813171},{"id":"https://openalex.org/keywords/biological-network","display_name":"Biological network","score":0.4792209267616272},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.46571993827819824},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.4409213066101074},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.4367334842681885},{"id":"https://openalex.org/keywords/protein\u2013protein-interaction","display_name":"Protein\u2013protein interaction","score":0.4268161654472351},{"id":"https://openalex.org/keywords/protein-function","display_name":"Protein function","score":0.4197829067707062},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.24932533502578735},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.18561846017837524},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.18307870626449585},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12435230612754822},{"id":"https://openalex.org/keywords/computer-network","display_name":"Computer network","score":0.11710339784622192}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7030389904975891},{"id":"https://openalex.org/C49937458","wikidata":"https://www.wikidata.org/wiki/Q2599292","display_name":"Probabilistic logic","level":2,"score":0.6828582286834717},{"id":"https://openalex.org/C2780801425","wikidata":"https://www.wikidata.org/wiki/Q5164392","display_name":"Construct (python library)","level":2,"score":0.558613657951355},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.5489903688430786},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5075094103813171},{"id":"https://openalex.org/C28225019","wikidata":"https://www.wikidata.org/wiki/Q4915005","display_name":"Biological network","level":2,"score":0.4792209267616272},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.46571993827819824},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.4409213066101074},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.4367334842681885},{"id":"https://openalex.org/C11804247","wikidata":"https://www.wikidata.org/wiki/Q896177","display_name":"Protein\u2013protein interaction","level":2,"score":0.4268161654472351},{"id":"https://openalex.org/C2986374874","wikidata":"https://www.wikidata.org/wiki/Q8054","display_name":"Protein function","level":3,"score":0.4197829067707062},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.24932533502578735},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.18561846017837524},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.18307870626449585},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12435230612754822},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.11710339784622192},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D060066","descriptor_name":"Protein Interaction Maps","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1186/s12859-016-1054-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1054-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-016-1054-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27117946","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27117946","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4847341","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4847341","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-1054-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1054-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-016-1054-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1874822141","display_name":null,"funder_award_id":"61572102","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G3553340515","display_name":"\u57fa\u4e8e\u591a\u8bcd\u9a71\u52a8\u4e0e\u5377\u79ef\u795e\u7ecf\u7f51\u7edc\u7684\u751f\u7269\u4e8b\u4ef6\u62bd\u53d6\u7814\u7a76\u4e0e\u5e94\u7528","funder_award_id":"61572098","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G5634910062","display_name":null,"funder_award_id":"61300088","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G8108786737","display_name":"\u57fa\u4e8e\u751f\u7269\u533b\u5b66\u6587\u732e\u7684\u9690\u542b\u77e5\u8bc6\u53d1\u73b0\u65b9\u6cd5\u7814\u7a76","funder_award_id":"61272373","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G843668074","display_name":null,"funder_award_id":"DUT14QY44","funder_id":"https://openalex.org/F4320335787","funder_display_name":"Fundamental Research Funds for the Central Universities"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320335787","display_name":"Fundamental Research Funds for the Central Universities","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2343517537.pdf","grobid_xml":"https://content.openalex.org/works/W2343517537.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1926568554","https://openalex.org/W1986214964","https://openalex.org/W1987363726","https://openalex.org/W1988496202","https://openalex.org/W1994505288","https://openalex.org/W2010870240","https://openalex.org/W2029425286","https://openalex.org/W2036799174","https://openalex.org/W2050721857","https://openalex.org/W2050978103","https://openalex.org/W2051365847","https://openalex.org/W2065230651","https://openalex.org/W2065304353","https://openalex.org/W2077386490","https://openalex.org/W2082565035","https://openalex.org/W2084619201","https://openalex.org/W2091254101","https://openalex.org/W2107067224","https://openalex.org/W2110211303","https://openalex.org/W2116117181","https://openalex.org/W2121564430","https://openalex.org/W2122964432","https://openalex.org/W2124354935","https://openalex.org/W2129297473","https://openalex.org/W2132582966","https://openalex.org/W2132993044","https://openalex.org/W2136850043","https://openalex.org/W2139708137","https://openalex.org/W2140280811","https://openalex.org/W2150934340","https://openalex.org/W2156499012","https://openalex.org/W2160429376","https://openalex.org/W2161174387","https://openalex.org/W2162032011","https://openalex.org/W2164928285","https://openalex.org/W2165520746","https://openalex.org/W2165533101","https://openalex.org/W2168264491","https://openalex.org/W2191274703"],"related_works":["https://openalex.org/W3127969109","https://openalex.org/W4280575464","https://openalex.org/W2010217915","https://openalex.org/W2083975137","https://openalex.org/W2066232588","https://openalex.org/W2043924719","https://openalex.org/W2165106082","https://openalex.org/W2910248973","https://openalex.org/W194554374","https://openalex.org/W2100585269"],"abstract_inverted_index":{"BACKGROUND:":[0],"Recently,":[1],"high-throughput":[2],"experimental":[3],"techniques":[4],"have":[5],"generated":[6],"a":[7,117,199],"large":[8,18],"amount":[9],"of":[10,53,71,87,105,135],"protein-protein":[11],"interaction":[12],"(PPI)":[13],"data":[14,59,147],"which":[15,48,124],"can":[16,66,189],"construct":[17,149],"complex":[19],"PPI":[20,37,46,109,142,172,176],"networks":[21,47,99,173,177,207],"for":[22,208],"numerous":[23],"organisms.":[24],"System":[25],"biology":[26],"attempts":[27],"to":[28,82,101,120,148,154,174,180,192,201],"understand":[29],"cellular":[30],"organization":[31],"and":[32,64,144],"function":[33],"by":[34,164],"analyzing":[35],"these":[36],"networks.":[38,110],"However,":[39],"most":[40],"studies":[41],"still":[42],"focus":[43],"on":[44,112],"static":[45,108,171,206],"neglect":[49],"the":[50,68,84],"dynamic":[51,69,96,103,133,175,203],"information":[52,70,104,134,204],"PPI.":[54],"RESULTS:":[55],"The":[56,168],"gene":[57,145],"expression":[58,146],"under":[60],"different":[61,90,140],"time":[62,92],"points":[63],"conditions":[65],"reveal":[67],"proteins.":[72],"In":[73],"this":[74,165],"study,":[75],"we":[76,114],"used":[77,138],"an":[78],"active":[79,85,91],"probability-based":[80],"method":[81,119,186],"distinguish":[83],"level":[86],"proteins":[88],"at":[89],"points.":[93],"We":[94,137],"constructed":[95],"probabilistic":[97],"protein":[98,106,122,159,183,194],"(DPPN)":[100],"integrate":[102,202],"into":[107,205],"Based":[111],"DPPN,":[113],"subsequently":[115],"proposed":[116],"novel":[118],"identify":[121,182,193],"complexes,":[123],"could":[125],"effectively":[126],"exploit":[127],"topological":[128],"structure":[129],"as":[130,132,212],"well":[131],"DPPN.":[136],"three":[139,150,155],"yeast":[141],"datasets":[143],"DPPNs.":[151],"When":[152],"applied":[153,191],"DPPNs,":[156],"many":[157],"well-characterized":[158],"complexes":[160],"were":[161],"accurately":[162,181],"identified":[163],"method.":[166],"CONCLUSION:":[167],"shift":[169],"from":[170],"is":[178],"essential":[179],"complex.":[184],"This":[185],"not":[187],"only":[188],"be":[190],"complex,":[195],"but":[196],"also":[197],"establish":[198],"framework":[200],"other":[209],"applications,":[210],"such":[211],"pathway":[213],"analysis.":[214]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":1}],"updated_date":"2026-07-23T08:03:31.855105","created_date":"2025-10-10T00:00:00"}
