{"id":"https://openalex.org/W2339350795","doi":"https://doi.org/10.1186/s12859-016-1002-0","title":"ChemiRs: a web application for microRNAs and chemicals","display_name":"ChemiRs: a web application for microRNAs and chemicals","publication_year":2016,"publication_date":"2016-04-18","ids":{"openalex":"https://openalex.org/W2339350795","doi":"https://doi.org/10.1186/s12859-016-1002-0","mag":"2339350795","pmid":"https://pubmed.ncbi.nlm.nih.gov/27091357"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-1002-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1002-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1002-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1002-0","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081102186","display_name":"Emily Chia\u2010Yu Su","orcid":"https://orcid.org/0000-0003-4801-5159"},"institutions":[{"id":"https://openalex.org/I47519274","display_name":"Taipei Medical University","ror":"https://ror.org/05031qk94","country_code":"TW","type":"education","lineage":["https://openalex.org/I47519274"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"Emily Chia-Yu Su","raw_affiliation_strings":["Graduate Institute of Biomedical Informatics, College of Medical Science and Technology, Taipei Medical University, Taipei, 110, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Institute of Biomedical Informatics, College of Medical Science and Technology, Taipei Medical University, Taipei, 110, Taiwan","institution_ids":["https://openalex.org/I47519274"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109294186","display_name":"Yu-Sing Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I134161618","display_name":"National Taiwan Normal University","ror":"https://ror.org/059dkdx38","country_code":"TW","type":"education","lineage":["https://openalex.org/I134161618"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yu-Sing Chen","raw_affiliation_strings":["Department of Life Science, College of Science, National Taiwan Normal University, Taipei, 116, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Life Science, College of Science, National Taiwan Normal University, Taipei, 116, Taiwan","institution_ids":["https://openalex.org/I134161618"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043606330","display_name":"Yun-Cheng Tien","orcid":null},"institutions":[{"id":"https://openalex.org/I134161618","display_name":"National Taiwan Normal University","ror":"https://ror.org/059dkdx38","country_code":"TW","type":"education","lineage":["https://openalex.org/I134161618"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yun-Cheng Tien","raw_affiliation_strings":["Department of Life Science, College of Science, National Taiwan Normal University, Taipei, 116, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Life Science, College of Science, National Taiwan Normal University, Taipei, 116, Taiwan","institution_ids":["https://openalex.org/I134161618"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006813610","display_name":"Jeff Liu","orcid":"https://orcid.org/0000-0002-9928-7552"},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Jeff Liu","raw_affiliation_strings":["Department of Civil Engineering, College of Engineering, National Taiwan University College of Engineering, Taipei, 106, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Civil Engineering, College of Engineering, National Taiwan University College of Engineering, Taipei, 106, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088255873","display_name":"Bing\u2010Ching Ho","orcid":"https://orcid.org/0000-0003-4356-3279"},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Bing-Ching Ho","raw_affiliation_strings":["Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, 100, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, 100, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5000918218","display_name":"Sung\u2010Liang Yu","orcid":"https://orcid.org/0000-0003-4535-9036"},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Sung-Liang Yu","raw_affiliation_strings":["Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, 100, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, 100, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101701594","display_name":"Sher Singh","orcid":"https://orcid.org/0000-0002-0250-8815"},"institutions":[{"id":"https://openalex.org/I134161618","display_name":"National Taiwan Normal University","ror":"https://ror.org/059dkdx38","country_code":"TW","type":"education","lineage":["https://openalex.org/I134161618"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Sher Singh","raw_affiliation_strings":["Department of Life Science, College of Science, National Taiwan Normal University, Taipei, 116, Taiwan. sher@ntnu.edu.tw","Department of Life Science, College of Science, National Taiwan Normal University, Taipei, 116, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Life Science, College of Science, National Taiwan Normal University, Taipei, 116, Taiwan. sher@ntnu.edu.tw","institution_ids":[]},{"raw_affiliation_string":"Department of Life Science, College of Science, National Taiwan Normal University, Taipei, 116, Taiwan","institution_ids":["https://openalex.org/I134161618"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5081102186"],"corresponding_institution_ids":["https://openalex.org/I47519274"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":2.1251,"has_fulltext":true,"cited_by_count":27,"citation_normalized_percentile":{"value":0.85536436,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"17","issue":"1","first_page":"167","last_page":"167"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.3353999853134155,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.3353999853134155,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.12200000137090683,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.06109999865293503,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5994588136672974},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.5753005146980286},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5300856232643127},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4839375615119934},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4266318380832672},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.4032122492790222},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3866230249404907},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3636515140533447},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.23043692111968994},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.09701076149940491},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09673020243644714}],"concepts":[{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5994588136672974},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.5753005146980286},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5300856232643127},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4839375615119934},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4266318380832672},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.4032122492790222},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3866230249404907},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3636515140533447},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.23043692111968994},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.09701076149940491},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09673020243644714}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1186/s12859-016-1002-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1002-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1002-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:27091357","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/27091357","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3804574","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4836156","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-1002-0","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-1002-0","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-1002-0","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2339350795.pdf","grobid_xml":"https://content.openalex.org/works/W2339350795.grobid-xml"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W1481189688","https://openalex.org/W1970459876","https://openalex.org/W1989277387","https://openalex.org/W1991852880","https://openalex.org/W1992442866","https://openalex.org/W2016941670","https://openalex.org/W2017426710","https://openalex.org/W2026184366","https://openalex.org/W2030037484","https://openalex.org/W2035459770","https://openalex.org/W2040191060","https://openalex.org/W2050869737","https://openalex.org/W2070571588","https://openalex.org/W2083381199","https://openalex.org/W2101117089","https://openalex.org/W2103017472","https://openalex.org/W2116661471","https://openalex.org/W2128219894","https://openalex.org/W2128768066","https://openalex.org/W2131848047","https://openalex.org/W2134118500","https://openalex.org/W2134873717","https://openalex.org/W2149785901","https://openalex.org/W2153234291","https://openalex.org/W2154085311","https://openalex.org/W2154435261","https://openalex.org/W2154722286","https://openalex.org/W2159793493","https://openalex.org/W2165724265","https://openalex.org/W2166240615","https://openalex.org/W2171629651","https://openalex.org/W2174734928","https://openalex.org/W4237335579"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W3151405604","https://openalex.org/W2565797512","https://openalex.org/W2050308539","https://openalex.org/W2793648706","https://openalex.org/W3043187607","https://openalex.org/W2019096591","https://openalex.org/W3032012916","https://openalex.org/W2057742104","https://openalex.org/W4283692078"],"abstract_inverted_index":{"BACKGROUND:":[0],"MicroRNAs":[1],"(miRNAs)":[2],"are":[3],"about":[4,183],"22":[5],"nucleotides,":[6],"non-coding":[7],"RNAs":[8],"that":[9],"affect":[10,59],"various":[11],"cellular":[12],"functions,":[13],"and":[14,36,53,62,65,89,94,106,125,148,157,179,213,225],"play":[15],"a":[16,80,196],"regulatory":[17],"role":[18],"in":[19,31,57,218],"different":[20],"organisms":[21],"including":[22],"human.":[23],"Until":[24],"now,":[25],"more":[26],"than":[27],"2500":[28],"mature":[29],"miRNAs":[30,124,224],"human":[32,54],"have":[33],"been":[34],"discovered":[35],"registered,":[37],"but":[38,108],"still":[39],"lack":[40],"of":[41,67,123,223,233],"information":[42,173],"or":[43],"algorithms":[44],"to":[45,71,113,155,162,204],"reveal":[46],"the":[47,199,231],"relations":[48,90],"among":[49,91],"miRNAs,":[50,92,107,138],"environmental":[51],"chemicals":[52,93,105,126,226],"health.":[55],"Chemicals":[56],"environment":[58],"our":[60],"health":[61],"daily":[63],"life,":[64],"some":[66],"them":[68],"can":[69,209,227],"lead":[70],"diseases":[72],"by":[73,104],"inferring":[74],"biological":[75],"pathways.":[76,95],"RESULTS:":[77],"We":[78,130,151],"develop":[79],"creditable":[81],"online":[82,133],"web":[83,200],"server,":[84],"ChemiRs,":[85,135],"for":[86,168,240],"predicting":[87],"interactions":[88],"The":[96],"database":[97],"not":[98],"only":[99],"compares":[100],"gene":[101,160],"lists":[102],"affected":[103],"also":[109,175],"incorporates":[110],"curated":[111],"pathways":[112,147],"identify":[114],"possible":[115],"interactions.":[116],"CONCLUSIONS:":[117],"Here,":[118],"we":[119],"manually":[120],"retrieved":[121],"associations":[122],"from":[127,177,189],"biomedical":[128],"literature.":[129],"developed":[131],"an":[132],"system,":[134],"which":[136],"contains":[137],"diseases,":[139],"Medical":[140],"Subject":[141],"Heading":[142],"(MeSH)":[143],"terms,":[144],"chemicals,":[145],"genes,":[146],"PubMed":[149],"IDs.":[150],"connected":[152],"each":[153],"miRNA":[154],"miRBase,":[156],"every":[158],"current":[159],"symbol":[161],"HUGO":[163],"Gene":[164,184],"Nomenclature":[165],"Committee":[166],"(HGNC)":[167],"genome":[169],"annotation.":[170],"Human":[171],"pathway":[172],"is":[174,187,202,237],"provided":[176],"KEGG":[178],"REACTOME":[180],"databases.":[181],"Information":[182],"Ontology":[185],"(GO)":[186],"queried":[188],"GO":[190],"Online":[191],"SQL":[192],"Environment":[193],"(GOOSE).":[194],"With":[195],"user-friendly":[197],"interface,":[198],"application":[201],"easy":[203],"use.":[205],"Multiple":[206],"query":[207],"results":[208],"be":[210],"easily":[211],"integrated":[212],"exported":[214],"as":[215],"report":[216],"documents":[217],"PDF":[219],"format.":[220],"Association":[221],"analysis":[222],"help":[228],"us":[229],"understand":[230],"pathogenesis":[232],"chemical":[234],"components.":[235],"ChemiRs":[236],"freely":[238],"available":[239],"public":[241],"use":[242],"at":[243],"http://omics.biol.ntnu.edu.tw/ChemiRs":[244],".":[245]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":1}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
