{"id":"https://openalex.org/W2281778589","doi":"https://doi.org/10.1186/s12859-016-0939-3","title":"A two-layer integration framework for protein complex detection","display_name":"A two-layer integration framework for protein complex detection","publication_year":2016,"publication_date":"2016-02-24","ids":{"openalex":"https://openalex.org/W2281778589","doi":"https://doi.org/10.1186/s12859-016-0939-3","mag":"2281778589","pmid":"https://pubmed.ncbi.nlm.nih.gov/26911324"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-0939-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-0939-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0939-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0939-3","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030129372","display_name":"Le Ou-Yang","orcid":"https://orcid.org/0000-0003-4007-4568"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]},{"id":"https://openalex.org/I168719708","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23","country_code":"HK","type":"education","lineage":["https://openalex.org/I168719708"]},{"id":"https://openalex.org/I180726961","display_name":"Shenzhen University","ror":"https://ror.org/01vy4gh70","country_code":"CN","type":"education","lineage":["https://openalex.org/I180726961"]}],"countries":["CN","HK"],"is_corresponding":false,"raw_author_name":"Le Ou-Yang","raw_affiliation_strings":["College of Information Engineering, Shenzhen University, Shenzhen, 518060, China. ouyangle@mail2.sysu.edu.cn","Department of Electronic Engineering, City University of Hong Kong, Hong Kong, China. ouyangle@mail2.sysu.edu.cn","Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Guangzhou, 510275, China. ouyangle@mail2.sysu.edu.cn","College of Information Engineering, Shenzhen University, Shenzhen, China","Department of Electronic Engineering, City University of Hong Kong, Hong Kong, China","Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Guangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Information Engineering, Shenzhen University, Shenzhen, 518060, China. ouyangle@mail2.sysu.edu.cn","institution_ids":["https://openalex.org/I180726961"]},{"raw_affiliation_string":"Department of Electronic Engineering, City University of Hong Kong, Hong Kong, China. ouyangle@mail2.sysu.edu.cn","institution_ids":["https://openalex.org/I168719708"]},{"raw_affiliation_string":"Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Guangzhou, 510275, China. ouyangle@mail2.sysu.edu.cn","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"College of Information Engineering, Shenzhen University, Shenzhen, China","institution_ids":["https://openalex.org/I180726961"]},{"raw_affiliation_string":"Department of Electronic Engineering, City University of Hong Kong, Hong Kong, China","institution_ids":["https://openalex.org/I168719708"]},{"raw_affiliation_string":"Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Guangzhou, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100340964","display_name":"Min Wu","orcid":"https://orcid.org/0000-0003-0977-3600"},"institutions":[{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]},{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":false,"raw_author_name":"Min Wu","raw_affiliation_strings":["Institute for Infocomm Research (I2R), A*STAR, 1 Fusionopolis Way, Singapore, Singapore. wumin@i2r.a-star.edu.sg","Institute for Infocomm Research (I2R), A*STAR, Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research (I2R), A*STAR, 1 Fusionopolis Way, Singapore, Singapore. wumin@i2r.a-star.edu.sg","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"Institute for Infocomm Research (I2R), A*STAR, Singapore, Singapore","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I3005327000"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100447043","display_name":"Xiao-Fei Zhang","orcid":"https://orcid.org/0000-0002-5052-9725"},"institutions":[{"id":"https://openalex.org/I40963666","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21","country_code":"CN","type":"education","lineage":["https://openalex.org/I40963666"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiao-Fei Zhang","raw_affiliation_strings":["School of Mathematics and Statistics & Hubei Key Laboratory of Mathematical Sciences, Central China Normal University, Wuhan, 430079, China. zhangxf9@mail2.sysu.edu.cn","School of Mathematics and Statistics & Hubei Key Laboratory of Mathematical Sciences, Central China Normal University, Wuhan, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Mathematics and Statistics & Hubei Key Laboratory of Mathematical Sciences, Central China Normal University, Wuhan, 430079, China. zhangxf9@mail2.sysu.edu.cn","institution_ids":["https://openalex.org/I40963666"]},{"raw_affiliation_string":"School of Mathematics and Statistics & Hubei Key Laboratory of Mathematical Sciences, Central China Normal University, Wuhan, China","institution_ids":["https://openalex.org/I40963666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102004642","display_name":"Dao\u2010Qing Dai","orcid":"https://orcid.org/0000-0003-4622-8492"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Dao-Qing Dai","raw_affiliation_strings":["Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Guangzhou, 510275, China. stsddq@mail.sysu.edu.cn","Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Guangzhou, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Guangzhou, 510275, China. stsddq@mail.sysu.edu.cn","institution_ids":["https://openalex.org/I157773358"]},{"raw_affiliation_string":"Intelligent Data Center and Department of Mathematics, Sun Yat-Sen University, Guangzhou, China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100418684","display_name":"Xiaoli Li","orcid":"https://orcid.org/0000-0002-0762-6562"},"institutions":[{"id":"https://openalex.org/I115228651","display_name":"Agency for Science, Technology and Research","ror":"https://ror.org/036wvzt09","country_code":"SG","type":"government","lineage":["https://openalex.org/I115228651"]},{"id":"https://openalex.org/I3005327000","display_name":"Institute for Infocomm Research","ror":"https://ror.org/053rfa017","country_code":"SG","type":"facility","lineage":["https://openalex.org/I115228651","https://openalex.org/I3005327000","https://openalex.org/I91275662"]}],"countries":["SG"],"is_corresponding":true,"raw_author_name":"Xiao-Li Li","raw_affiliation_strings":["Institute for Infocomm Research (I2R), A*STAR, 1 Fusionopolis Way, Singapore, Singapore. xlli@i2r.a-star.edu.sg","Institute for Infocomm Research (I2R), A*STAR, Singapore, Singapore"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute for Infocomm Research (I2R), A*STAR, 1 Fusionopolis Way, Singapore, Singapore. xlli@i2r.a-star.edu.sg","institution_ids":["https://openalex.org/I3005327000"]},{"raw_affiliation_string":"Institute for Infocomm Research (I2R), A*STAR, Singapore, Singapore","institution_ids":["https://openalex.org/I115228651","https://openalex.org/I3005327000"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100644375","display_name":"Hong Yan","orcid":"https://orcid.org/0000-0001-9661-3095"},"institutions":[{"id":"https://openalex.org/I168719708","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23","country_code":"HK","type":"education","lineage":["https://openalex.org/I168719708"]}],"countries":["HK"],"is_corresponding":false,"raw_author_name":"Hong Yan","raw_affiliation_strings":["Department of Electronic Engineering, City University of Hong Kong, Hong Kong, China. h.yan@cityu.edu.hk","Department of Electronic Engineering, City University of Hong Kong, Hong Kong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Electronic Engineering, City University of Hong Kong, Hong Kong, China. h.yan@cityu.edu.hk","institution_ids":["https://openalex.org/I168719708"]},{"raw_affiliation_string":"Department of Electronic Engineering, City University of Hong Kong, Hong Kong, China","institution_ids":["https://openalex.org/I168719708"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5100418684","https://openalex.org/A5102004642"],"corresponding_institution_ids":["https://openalex.org/I115228651","https://openalex.org/I157773358","https://openalex.org/I3005327000"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":2.0845,"has_fulltext":true,"cited_by_count":19,"citation_normalized_percentile":{"value":0.86621622,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"17","issue":"1","first_page":"100","last_page":"100"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.7023000121116638,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.7023000121116638,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.10920000076293945,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.10339999943971634,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7276760339736938},{"id":"https://openalex.org/keywords/cluster-analysis","display_name":"Cluster analysis","score":0.668654203414917},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.5409780740737915},{"id":"https://openalex.org/keywords/metric","display_name":"Metric (unit)","score":0.492801696062088},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4261196255683899},{"id":"https://openalex.org/keywords/data-integration","display_name":"Data integration","score":0.42410707473754883},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.34571272134780884}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7276760339736938},{"id":"https://openalex.org/C73555534","wikidata":"https://www.wikidata.org/wiki/Q622825","display_name":"Cluster analysis","level":2,"score":0.668654203414917},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.5409780740737915},{"id":"https://openalex.org/C176217482","wikidata":"https://www.wikidata.org/wiki/Q860554","display_name":"Metric (unit)","level":2,"score":0.492801696062088},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4261196255683899},{"id":"https://openalex.org/C72634772","wikidata":"https://www.wikidata.org/wiki/Q386824","display_name":"Data integration","level":2,"score":0.42410707473754883},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34571272134780884},{"id":"https://openalex.org/C21547014","wikidata":"https://www.wikidata.org/wiki/Q1423657","display_name":"Operations management","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-016-0939-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-0939-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0939-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26911324","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26911324","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/181388","is_oa":true,"landing_page_url":"https://scholarbank.nus.edu.sg/handle/10635/181388","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Unpaywall 20201031","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4765032","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4765032","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:publications/2e9bcbe6-5cd1-4d20-8691-a9816bcee88b","is_oa":true,"landing_page_url":"https://hdl.handle.net/2031/2e9bcbe6-5cd1-4d20-8691-a9816bcee88b","pdf_url":null,"source":{"id":"https://openalex.org/S7407055387","display_name":"CityU Scholars","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Ou-Yang, L, Wu, M, Zhang, X-F, Dai, D-Q, Li, X-L & Yan, H 2016, 'A two-layer integration framework for protein complex detection', BMC Bioinformatics, vol. 17, no. 1, 100. https://doi.org/10.1186/s12859-016-0939-3","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-0939-3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-0939-3","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0939-3","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G3002491232","display_name":null,"funder_award_id":"20120171110016","funder_id":"https://openalex.org/F4320321106","funder_display_name":"Ministry of Education of the People's Republic of China"},{"id":"https://openalex.org/G3010105402","display_name":null,"funder_award_id":"CCNU15ZD011","funder_id":"https://openalex.org/F4320323173","funder_display_name":"Central China Normal University"},{"id":"https://openalex.org/G5544219327","display_name":null,"funder_award_id":"9610034","funder_id":"https://openalex.org/F4320309893","funder_display_name":"City University of Hong Kong"},{"id":"https://openalex.org/G6205944495","display_name":null,"funder_award_id":"Project 9610034","funder_id":"https://openalex.org/F4320309893","funder_display_name":"City University of Hong Kong"},{"id":"https://openalex.org/G660828770","display_name":null,"funder_award_id":"61375033","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7128375257","display_name":null,"funder_award_id":"11171354","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7534660035","display_name":null,"funder_award_id":"61402190","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G7604058285","display_name":null,"funder_award_id":"61375033","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G804469284","display_name":null,"funder_award_id":"S2013020012796","funder_id":"https://openalex.org/F4320321921","funder_display_name":"Natural Science Foundation of Guangdong Province"},{"id":"https://openalex.org/G8543904368","display_name":null,"funder_award_id":"61532008","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320309893","display_name":"City University of Hong Kong","ror":"https://ror.org/03q8dnn23"},{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321106","display_name":"Ministry of Education of the People's Republic of China","ror":"https://ror.org/01mv9t934"},{"id":"https://openalex.org/F4320321921","display_name":"Natural Science Foundation of Guangdong Province","ror":null},{"id":"https://openalex.org/F4320322724","display_name":"Ministry of Education, India","ror":"https://ror.org/048xjjh50"},{"id":"https://openalex.org/F4320323173","display_name":"Central China Normal University","ror":"https://ror.org/03x1jna21"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2281778589.pdf","grobid_xml":"https://content.openalex.org/works/W2281778589.grobid-xml"},"referenced_works_count":65,"referenced_works":["https://openalex.org/W1485582261","https://openalex.org/W1541995035","https://openalex.org/W1783384641","https://openalex.org/W1876024155","https://openalex.org/W1980928832","https://openalex.org/W1986214964","https://openalex.org/W1987219048","https://openalex.org/W1987363726","https://openalex.org/W1990144966","https://openalex.org/W2001966531","https://openalex.org/W2007921075","https://openalex.org/W2037679672","https://openalex.org/W2040847667","https://openalex.org/W2042832558","https://openalex.org/W2050721857","https://openalex.org/W2057793636","https://openalex.org/W2062451863","https://openalex.org/W2066301596","https://openalex.org/W2070746915","https://openalex.org/W2076057012","https://openalex.org/W2082565035","https://openalex.org/W2082782088","https://openalex.org/W2084619201","https://openalex.org/W2090422756","https://openalex.org/W2096180769","https://openalex.org/W2098946845","https://openalex.org/W2105249086","https://openalex.org/W2107067224","https://openalex.org/W2108102049","https://openalex.org/W2108119513","https://openalex.org/W2116117181","https://openalex.org/W2116447934","https://openalex.org/W2124166542","https://openalex.org/W2124354935","https://openalex.org/W2128343754","https://openalex.org/W2130687290","https://openalex.org/W2134019300","https://openalex.org/W2135098204","https://openalex.org/W2136850043","https://openalex.org/W2137984500","https://openalex.org/W2138003801","https://openalex.org/W2139854834","https://openalex.org/W2140280811","https://openalex.org/W2140462113","https://openalex.org/W2144393227","https://openalex.org/W2145284532","https://openalex.org/W2150902060","https://openalex.org/W2151296292","https://openalex.org/W2154600255","https://openalex.org/W2158266097","https://openalex.org/W2159034862","https://openalex.org/W2160313295","https://openalex.org/W2162891889","https://openalex.org/W2163487866","https://openalex.org/W2165533101","https://openalex.org/W2166344835","https://openalex.org/W2167869241","https://openalex.org/W2178465836","https://openalex.org/W2403079677","https://openalex.org/W2560674852","https://openalex.org/W2571268788","https://openalex.org/W2962999825","https://openalex.org/W3099209941","https://openalex.org/W4254390717","https://openalex.org/W4299828299"],"related_works":["https://openalex.org/W2326113450","https://openalex.org/W1488437289","https://openalex.org/W2762277149","https://openalex.org/W2390847229","https://openalex.org/W1963543573","https://openalex.org/W2187249578","https://openalex.org/W2356020937","https://openalex.org/W2033805144","https://openalex.org/W2189421535","https://openalex.org/W2370210292"],"abstract_inverted_index":{"BACKGROUND:":[0],"Protein":[1],"complexes":[2,17,202],"carry":[3],"out":[4],"nearly":[5],"all":[6],"signaling":[7],"and":[8,26,57,65,75,81,101,130,173,227],"functional":[9],"processes":[10],"within":[11],"cells.":[12],"The":[13],"study":[14],"of":[15,33],"protein":[16,45,121,201],"is":[18,94,196],"an":[19,175,181],"effective":[20],"strategy":[21],"to":[22,43,59,98,119,142,148,198],"analyze":[23],"cellular":[24],"functions":[25],"biological":[27,67],"processes.":[28],"With":[29],"the":[30,124,161,204],"increasing":[31],"availability":[32],"proteomics":[34],"data,":[35],"various":[36,66,139],"computational":[37,49,87],"methods":[38,50,69],"have":[39,70],"recently":[40],"been":[41],"developed":[42],"predict":[44],"complexes.":[46],"However,":[47],"different":[48,62,78],"are":[51,76],"based":[52],"on":[53,61,89],"their":[54,71,150],"own":[55],"assumptions":[56],"designed":[58],"work":[60],"data":[63,92,132,172,228],"sources,":[64],"screening":[68],"unique":[72],"experiment":[73],"conditions,":[74],"often":[77],"in":[79],"scale":[80],"noise":[82],"level.":[83],"Therefore,":[84],"a":[85,90,111,187],"single":[86],"method":[88],"specific":[91],"source":[93],"generally":[95],"not":[96],"able":[97],"generate":[99],"comprehensive":[100],"reliable":[102],"prediction":[103],"results.":[104],"RESULTS:":[105],"In":[106,134],"this":[107],"paper,":[108],"we":[109,136,155],"develop":[110],"novel":[112,188],"Two-layer":[113],"INtegrative":[114],"Complex":[115],"Detection":[116],"(TINCD)":[117],"model":[118,195],"detect":[120,199],"complexes,":[122],"leveraging":[123],"information":[125],"from":[126,166,203],"both":[127],"clustering":[128,140,226],"results":[129,141,211],"raw":[131],"sources.":[133],"particular,":[135],"first":[137],"integrate":[138],"construct":[143],"consensus":[144,158],"matrices":[145,159],"for":[146],"proteins":[147],"measure":[149],"overall":[151],"co-complex":[152,162,177],"propensity.":[153],"Second,":[154],"combine":[156],"these":[157],"with":[160],"score":[163],"matrix":[164,193],"derived":[165],"Tandem":[167],"Affinity":[168],"Purification/Mass":[169],"Spectrometry":[170],"(TAP)":[171],"obtain":[174],"integrated":[176,205],"similarity":[178,206],"network":[179],"via":[180],"unsupervised":[182],"metric":[183],"fusion":[184],"method.":[185],"Finally,":[186],"graph":[189],"regularized":[190],"doubly":[191],"stochastic":[192],"decomposition":[194],"proposed":[197],"overlapping":[200],"network.":[207],"CONCLUSIONS:":[208],"Extensive":[209],"experimental":[210],"demonstrate":[212],"that":[213],"TINCD":[214],"performs":[215],"much":[216],"better":[217],"than":[218],"21":[219],"state-of-the-art":[220],"complex":[221],"detection":[222],"techniques,":[223],"including":[224],"ensemble":[225],"integration":[229],"techniques.":[230]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":2}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
