{"id":"https://openalex.org/W2271139250","doi":"https://doi.org/10.1186/s12859-016-0920-1","title":"sciReptor: analysis of single-cell level immunoglobulin repertoires","display_name":"sciReptor: analysis of single-cell level immunoglobulin repertoires","publication_year":2016,"publication_date":"2016-02-04","ids":{"openalex":"https://openalex.org/W2271139250","doi":"https://doi.org/10.1186/s12859-016-0920-1","mag":"2271139250","pmid":"https://pubmed.ncbi.nlm.nih.gov/26847109"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-0920-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-0920-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0920-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0920-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012889355","display_name":"Katharina Imkeller","orcid":"https://orcid.org/0000-0002-5177-0852"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Katharina Imkeller","raw_affiliation_strings":["Division of B Cell Immunology, German Cancer Research Center, Feld 280, Heidelberg, 69120, Germany. k.imkeller@dkfz-heidelberg.de","Division of B Cell Immunology, German Cancer Research Center, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of B Cell Immunology, German Cancer Research Center, Feld 280, Heidelberg, 69120, Germany. k.imkeller@dkfz-heidelberg.de","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"Division of B Cell Immunology, German Cancer Research Center, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061087030","display_name":"Peter F. Arndt","orcid":"https://orcid.org/0000-0003-1762-9836"},"institutions":[{"id":"https://openalex.org/I4210142260","display_name":"Max Planck Institute for Molecular Genetics","ror":"https://ror.org/03ate3e03","country_code":"DE","type":"facility","lineage":["https://openalex.org/I149899117","https://openalex.org/I4210142260"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Peter F. Arndt","raw_affiliation_strings":["Department for Computational Molecular Biology, Max Planck Institute for Molecular Genetics, Ihnestrasse 63-73, Berlin, 14195, Germany. arndt@molgen.mpg.de","Department for Computational Molecular Biology, Max Planck Institute for Molecular Genetics, Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department for Computational Molecular Biology, Max Planck Institute for Molecular Genetics, Ihnestrasse 63-73, Berlin, 14195, Germany. arndt@molgen.mpg.de","institution_ids":["https://openalex.org/I4210142260"]},{"raw_affiliation_string":"Department for Computational Molecular Biology, Max Planck Institute for Molecular Genetics, Berlin, Germany","institution_ids":["https://openalex.org/I4210142260"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012230366","display_name":"Hedda Wardemann","orcid":"https://orcid.org/0000-0003-3921-5933"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Hedda Wardemann","raw_affiliation_strings":["Division of B Cell Immunology, German Cancer Research Center, Feld 280, Heidelberg, 69120, Germany. h.wardemann@dkfz-heidelberg.de","Division of B Cell Immunology, German Cancer Research Center, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of B Cell Immunology, German Cancer Research Center, Feld 280, Heidelberg, 69120, Germany. h.wardemann@dkfz-heidelberg.de","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"Division of B Cell Immunology, German Cancer Research Center, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5046914096","display_name":"Christian E. Busse","orcid":"https://orcid.org/0000-0001-7553-905X"},"institutions":[{"id":"https://openalex.org/I17937529","display_name":"German Cancer Research Center","ror":"https://ror.org/04cdgtt98","country_code":"DE","type":"facility","lineage":["https://openalex.org/I1305996414","https://openalex.org/I17937529"]},{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"Christian E. Busse","raw_affiliation_strings":["Division of B Cell Immunology, German Cancer Research Center, Feld 280, Heidelberg, 69120, Germany. christian.busse@dkfz-heidelberg.de","Division of B Cell Immunology, German Cancer Research Center, Heidelberg, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of B Cell Immunology, German Cancer Research Center, Feld 280, Heidelberg, 69120, Germany. christian.busse@dkfz-heidelberg.de","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]},{"raw_affiliation_string":"Division of B Cell Immunology, German Cancer Research Center, Heidelberg, Germany","institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5046914096"],"corresponding_institution_ids":["https://openalex.org/I17937529","https://openalex.org/I223822909"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":3.3075,"has_fulltext":true,"cited_by_count":36,"citation_normalized_percentile":{"value":0.92059117,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"17","issue":"1","first_page":"67","last_page":"67"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.6664000153541565,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.6664000153541565,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11016","display_name":"Monoclonal and Polyclonal Antibodies Research","score":0.12380000203847885,"subfield":{"id":"https://openalex.org/subfields/2741","display_name":"Radiology, Nuclear Medicine and Imaging"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.09600000083446503,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5685557126998901},{"id":"https://openalex.org/keywords/dna-microarray","display_name":"DNA microarray","score":0.5461985468864441},{"id":"https://openalex.org/keywords/single-cell-analysis","display_name":"Single-cell analysis","score":0.5421626567840576},{"id":"https://openalex.org/keywords/antibody","display_name":"Antibody","score":0.4663395583629608},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.44404512643814087},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3510259985923767},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.34366926550865173},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.32604506611824036},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1682322919368744},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.12606742978096008}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5685557126998901},{"id":"https://openalex.org/C95371953","wikidata":"https://www.wikidata.org/wiki/Q591745","display_name":"DNA microarray","level":4,"score":0.5461985468864441},{"id":"https://openalex.org/C2776950831","wikidata":"https://www.wikidata.org/wiki/Q15635432","display_name":"Single-cell analysis","level":3,"score":0.5421626567840576},{"id":"https://openalex.org/C159654299","wikidata":"https://www.wikidata.org/wiki/Q79460","display_name":"Antibody","level":2,"score":0.4663395583629608},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.44404512643814087},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3510259985923767},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.34366926550865173},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.32604506611824036},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1682322919368744},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.12606742978096008}],"mesh":[{"descriptor_ui":"D005803","descriptor_name":"Genes, Immunoglobulin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005803","descriptor_name":"Genes, Immunoglobulin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005803","descriptor_name":"Genes, Immunoglobulin","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D007136","descriptor_name":"Immunoglobulins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011971","descriptor_name":"Receptors, Immunologic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011971","descriptor_name":"Receptors, Immunologic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011971","descriptor_name":"Receptors, Immunologic","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059010","descriptor_name":"Single-Cell Analysis","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-016-0920-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-0920-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0920-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26847109","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26847109","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4743164","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4743164","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:pure.mpg.de:item_2417109","is_oa":true,"landing_page_url":"http://hdl.handle.net/11858/00-001M-0000-002D-476D-8","pdf_url":null,"source":{"id":"https://openalex.org/S4306400654","display_name":"MPG.PuRe (Max Planck Society)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I149899117","host_organization_name":"Max Planck Society","host_organization_lineage":["https://openalex.org/I149899117"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-0920-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-0920-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0920-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320327553","display_name":"International Max Planck Research School for Advanced Methods in Process and Systems Engineering","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2271139250.pdf","grobid_xml":"https://content.openalex.org/works/W2271139250.grobid-xml"},"referenced_works_count":16,"referenced_works":["https://openalex.org/W1603068239","https://openalex.org/W2029525307","https://openalex.org/W2047006060","https://openalex.org/W2055043387","https://openalex.org/W2074560222","https://openalex.org/W2097964057","https://openalex.org/W2113392525","https://openalex.org/W2119819215","https://openalex.org/W2121869835","https://openalex.org/W2132926880","https://openalex.org/W2133687564","https://openalex.org/W2136476597","https://openalex.org/W2151558930","https://openalex.org/W2179333422","https://openalex.org/W2188526495","https://openalex.org/W4297944090"],"related_works":["https://openalex.org/W2930001795","https://openalex.org/W2415013816","https://openalex.org/W4229068595","https://openalex.org/W3013151148","https://openalex.org/W4231548908","https://openalex.org/W4247819660","https://openalex.org/W2975378934","https://openalex.org/W3104133195","https://openalex.org/W2781745374","https://openalex.org/W3016776056"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,27,118,188],"sequencing":[2,25,44,113],"of":[3,31,41,53,89,109,144,181],"immunoglobulin":[4,124],"(Ig)":[5],"transcripts":[6],"from":[7],"single":[8],"B":[9],"cells":[10],"yields":[11],"essential":[12],"information":[13],"about":[14],"Ig":[15],"heavy:light":[16],"chain":[17],"pairing,":[18],"which":[19,62],"is":[20,173],"lost":[21],"in":[22],"conventional":[23],"bulk":[24],"experiments.":[26],"previously":[28],"limited":[29],"throughput":[30],"single-cell":[32,48,79,116,186],"approaches":[33],"has":[34],"recently":[35],"been":[36],"overcome":[37],"by":[38],"the":[39,51,69,105],"introduction":[40],"multiple":[42],"next-generation":[43],"(NGS)-based":[45],"platforms.":[46],"Furthermore,":[47,157],"techniques":[49],"allow":[50],"assignment":[52],"additional":[54,145],"data":[55,80,91,114,133,146,193,205],"types":[56],"(e.g.":[57],"cell":[58,150],"surface":[59,151],"marker":[60,152],"expression),":[61],"are":[63,74,137],"crucial":[64],"for":[65,87,104,123,177],"biological":[66,94],"interpretation.":[67],"However,":[68],"currently":[70],"available":[71],"computational":[72],"tools":[73,122],"not":[75,83],"designed":[76],"to":[77,92],"handle":[78],"and":[81,107,134,139,195],"do":[82],"provide":[84],"integral":[85],"solutions":[86],"linking":[88],"sequence":[90,125,179],"other":[93],"data.":[95],"RESULTS:":[96],"Here":[97],"we":[98],"introduce":[99],"sciReptor,":[100],"a":[101,128,160,174],"flexible":[102,175],"toolkit":[103],"processing":[106],"analysis":[108,135,180],"antigen":[110,182],"receptor":[111,183],"repertoire":[112,168],"at":[115],"level.":[117,187],"software":[119],"combines":[120],"bioinformatics":[121],"annotation":[126],"with":[127],"relational":[129,189],"database,":[130],"where":[131],"raw":[132],"results":[136],"stored":[138],"linked.":[140],"sciReptor":[141,172],"supports":[142],"attribution":[143],"categories":[147],"such":[148],"as":[149,164,166,198,200],"expression":[153],"or":[154],"immunological":[155],"metadata.":[156],"it":[158],"comprises":[159],"quality":[161],"control":[162],"module":[163],"well":[165,199],"basic":[167],"visualization":[169],"tools.":[170],"CONCLUSION:":[171],"framework":[176],"standardized":[178],"repertoires":[184],"on":[185],"database":[190],"allows":[191],"easy":[192],"sharing":[194],"downstream":[196],"analyses":[197],"immediate":[201],"comparisons":[202],"between":[203],"different":[204],"sets.":[206]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":3}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}