{"id":"https://openalex.org/W2283262782","doi":"https://doi.org/10.1186/s12859-016-0904-1","title":"GenAp: a distributed SQL interface for genomic data","display_name":"GenAp: a distributed SQL interface for genomic data","publication_year":2016,"publication_date":"2016-02-04","ids":{"openalex":"https://openalex.org/W2283262782","doi":"https://doi.org/10.1186/s12859-016-0904-1","mag":"2283262782","pmid":"https://pubmed.ncbi.nlm.nih.gov/26846841"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-016-0904-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-0904-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0904-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0904-1","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5088317076","display_name":"Christos Kozanitis","orcid":"https://orcid.org/0000-0003-3566-1610"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Christos Kozanitis","raw_affiliation_strings":["Department of Computer Science, University of California Berkeley, Soda Hall, Berkeley, 94720, California, USA. kozanitis@eecs.berkeley.edu","Department of Computer Science, University of California Berkeley, Soda Hall, Berkeley, 94720, California, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of California Berkeley, Soda Hall, Berkeley, 94720, California, USA. kozanitis@eecs.berkeley.edu","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"Department of Computer Science, University of California Berkeley, Soda Hall, Berkeley, 94720, California, USA","institution_ids":["https://openalex.org/I95457486"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077202069","display_name":"David A. Patterson","orcid":"https://orcid.org/0000-0003-0902-7093"},"institutions":[{"id":"https://openalex.org/I95457486","display_name":"University of California, Berkeley","ror":"https://ror.org/01an7q238","country_code":"US","type":"education","lineage":["https://openalex.org/I95457486"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"David A. Patterson","raw_affiliation_strings":["Department of Computer Science, University of California Berkeley, Soda Hall, Berkeley, 94720, California, USA. pattersn@eecs.berkeley.edu","Department of Computer Science, University of California Berkeley, Soda Hall, Berkeley, 94720, California, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of California Berkeley, Soda Hall, Berkeley, 94720, California, USA. pattersn@eecs.berkeley.edu","institution_ids":["https://openalex.org/I95457486"]},{"raw_affiliation_string":"Department of Computer Science, University of California Berkeley, Soda Hall, Berkeley, 94720, California, USA","institution_ids":["https://openalex.org/I95457486"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5088317076"],"corresponding_institution_ids":["https://openalex.org/I95457486"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":7.5838,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.9674099,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":98},"biblio":{"volume":"17","issue":"1","first_page":"63","last_page":"63"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.3578999936580658,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.3578999936580658,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10317","display_name":"Advanced Database Systems and Queries","score":0.3098999857902527,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10772","display_name":"Distributed systems and fault tolerance","score":0.02759999968111515,"subfield":{"id":"https://openalex.org/subfields/1705","display_name":"Computer Networks and Communications"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8003582954406738},{"id":"https://openalex.org/keywords/sql","display_name":"SQL","score":0.7888211011886597},{"id":"https://openalex.org/keywords/joins","display_name":"Joins","score":0.7610446214675903},{"id":"https://openalex.org/keywords/spark","display_name":"SPARK (programming language)","score":0.6598062515258789},{"id":"https://openalex.org/keywords/byte","display_name":"Byte","score":0.5225353240966797},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.43155890703201294},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4134112596511841},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.34842449426651},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.2600582540035248},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.2569490671157837}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8003582954406738},{"id":"https://openalex.org/C510870499","wikidata":"https://www.wikidata.org/wiki/Q47607","display_name":"SQL","level":2,"score":0.7888211011886597},{"id":"https://openalex.org/C2778692605","wikidata":"https://www.wikidata.org/wiki/Q4041866","display_name":"Joins","level":2,"score":0.7610446214675903},{"id":"https://openalex.org/C2781215313","wikidata":"https://www.wikidata.org/wiki/Q3493345","display_name":"SPARK (programming language)","level":2,"score":0.6598062515258789},{"id":"https://openalex.org/C43364308","wikidata":"https://www.wikidata.org/wiki/Q8799","display_name":"Byte","level":2,"score":0.5225353240966797},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.43155890703201294},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4134112596511841},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.34842449426651},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.2600582540035248},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.2569490671157837}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059014","descriptor_name":"High-Throughput Nucleotide Sequencing","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1186/s12859-016-0904-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-0904-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0904-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26846841","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26846841","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:osti.gov:1618522","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1618522","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4741060","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4741060","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-016-0904-1","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-016-0904-1","pdf_url":"https://bmcbioinformatics.biomedcentral.com/track/pdf/10.1186/s12859-016-0904-1","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4417639437","display_name":null,"funder_award_id":"U54HG007990","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G4654920669","display_name":null,"funder_award_id":"CCF-1139158","funder_id":"https://openalex.org/F4320332169","funder_display_name":"Directorate for Computer and Information Science and Engineering"},{"id":"https://openalex.org/G4713059963","display_name":null,"funder_award_id":"FA8750","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"},{"id":"https://openalex.org/G579401873","display_name":null,"funder_award_id":"NSF CISE Expeditions Award CCF-1139158","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G589244659","display_name":null,"funder_award_id":"XData Award FA8750-12-2-0331","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"},{"id":"https://openalex.org/G6284359468","display_name":null,"funder_award_id":"Award 7076018","funder_id":"https://openalex.org/F4320338292","funder_display_name":"Lawrence Berkeley National Laboratory"},{"id":"https://openalex.org/G6398089940","display_name":"Making Sense at Scale with Algorithms, Machines, and People","funder_award_id":"1139158","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7103680314","display_name":null,"funder_award_id":"FA8750-12-2-0331","funder_id":"https://openalex.org/F4320332180","funder_display_name":"Defense Advanced Research Projects Agency"},{"id":"https://openalex.org/G7343583039","display_name":null,"funder_award_id":"HHSN261201400006C","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8560804567","display_name":null,"funder_award_id":"7076018","funder_id":"https://openalex.org/F4320338292","funder_display_name":"Lawrence Berkeley National Laboratory"},{"id":"https://openalex.org/G900736768","display_name":null,"funder_award_id":"CCF-1139158","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320307791","display_name":"Cisco Systems","ror":"https://ror.org/03yt1ez60"},{"id":"https://openalex.org/F4320310598","display_name":"Amazon Web Services","ror":"https://ror.org/04mv4n011"},{"id":"https://openalex.org/F4320312638","display_name":"Thomas and Stacey Siebel Foundation","ror":null},{"id":"https://openalex.org/F4320316505","display_name":"NetApp","ror":"https://ror.org/05c4cm338"},{"id":"https://openalex.org/F4320316785","display_name":"VMware","ror":null},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320332169","display_name":"Directorate for Computer and Information Science and Engineering","ror":"https://ror.org/025kzpk63"},{"id":"https://openalex.org/F4320332180","display_name":"Defense Advanced Research Projects Agency","ror":"https://ror.org/02caytj08"},{"id":"https://openalex.org/F4320332195","display_name":"Samsung","ror":"https://ror.org/04w3jy968"},{"id":"https://openalex.org/F4320337376","display_name":"NIH Clinical Center","ror":"https://ror.org/04vfsmv21"},{"id":"https://openalex.org/F4320338292","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2283262782.pdf","grobid_xml":"https://content.openalex.org/works/W2283262782.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W1989017925","https://openalex.org/W2011713075","https://openalex.org/W2038412523","https://openalex.org/W2074935284","https://openalex.org/W2102619694","https://openalex.org/W2108234281","https://openalex.org/W2110086534","https://openalex.org/W2118432914","https://openalex.org/W2131975293","https://openalex.org/W2139072600","https://openalex.org/W2141563029","https://openalex.org/W2142434250","https://openalex.org/W2142680014","https://openalex.org/W2147841875","https://openalex.org/W2149992227","https://openalex.org/W2156933902","https://openalex.org/W2189371416","https://openalex.org/W2952652959"],"related_works":["https://openalex.org/W2088925915","https://openalex.org/W2382891957","https://openalex.org/W2558523485","https://openalex.org/W4379407450","https://openalex.org/W411760269","https://openalex.org/W2408437972","https://openalex.org/W2905107896","https://openalex.org/W2895375519","https://openalex.org/W3005553575","https://openalex.org/W4320802139"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1],"impressively":[2],"low":[3],"cost":[4],"and":[5,33,130],"improved":[6],"quality":[7],"of":[8,14,30,43,49,54,60,62,94,158,160,175],"genome":[9],"sequencing":[10],"provides":[11],"to":[12,23,68,75,87,144,154,165,168],"researchers":[13],"genetic":[15,28],"diseases,":[16],"such":[17,118,170],"as":[18,110,149],"cancer,":[19],"a":[20,41,91,97],"powerful":[21],"tool":[22],"better":[24],"understand":[25],"the":[26,47,65,70,85,156],"underlying":[27],"mechanisms":[29],"those":[31],"diseases":[32],"treat":[34],"them":[35],"with":[36],"effective":[37],"targeted":[38],"therapies.":[39],"Thus,":[40,137],"number":[42,157],"projects":[44],"today":[45],"sequence":[46],"DNA":[48],"large":[50],"patient":[51],"populations":[52],"each":[53],"which":[55],"produces":[56],"at":[57],"least":[58],"hundreds":[59],"terra-bytes":[61],"data.":[63],"Now":[64],"challenge":[66,89],"is":[67,90],"provide":[69],"produced":[71],"data":[72,147,171],"on":[73],"demand":[74],"interested":[76],"parties.":[77],"RESULTS:":[78],"In":[79],"this":[80,88,113],"paper,":[81],"we":[82,150],"show":[83],"that":[84,102,106,163],"response":[86],"modified":[92],"version":[93],"Spark":[95,115,138],"SQL,":[96],"distributed":[98,135],"SQL":[99,116,139],"execution":[100],"engine,":[101],"handles":[103],"efficiently":[104],"joins":[105,119],"use":[107],"genomic":[108,146],"intervals":[109],"keys.":[111],"With":[112],"modification,":[114],"serves":[117],"more":[120],"than":[121,124,133],"50\u00d7":[122],"faster":[123,132],"its":[125],"existing":[126,142],"brute":[127],"force":[128],"approach":[129],"8\u00d7":[131],"similar":[134],"implementations.":[136],"can":[140],"replace":[141],"practices":[143],"retrieve":[145],"and,":[148],"show,":[151],"allow":[152],"users":[153],"reduce":[155],"lines":[159],"software":[161],"code":[162],"needs":[164],"be":[166],"developed":[167],"query":[169],"by":[172],"an":[173],"order":[174],"magnitude.":[176]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":1}],"updated_date":"2026-05-21T06:26:12.895304","created_date":"2025-10-10T00:00:00"}
