{"id":"https://openalex.org/W2101731663","doi":"https://doi.org/10.1186/s12859-015-0637-6","title":"RDML-Ninja and RDMLdb for standardized exchange of qPCR data","display_name":"RDML-Ninja and RDMLdb for standardized exchange of qPCR data","publication_year":2015,"publication_date":"2015-06-19","ids":{"openalex":"https://openalex.org/W2101731663","doi":"https://doi.org/10.1186/s12859-015-0637-6","mag":"2101731663","pmid":"https://pubmed.ncbi.nlm.nih.gov/26087842"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-015-0637-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-015-0637-6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0637-6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0637-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110235738","display_name":"Jan M. Ruijter","orcid":null},"institutions":[{"id":"https://openalex.org/I2802928900","display_name":"Amsterdam UMC Location University of Amsterdam","ror":"https://ror.org/03t4gr691","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I2802928900","https://openalex.org/I4210151833"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Jan M. Ruijter","raw_affiliation_strings":["Department of Anatomy, Embryology & Physiology, Academic Medical Center, Amsterdam, 1100AZ, Netherlands. j.m.ruijter@amc.uva.nl"],"affiliations":[{"raw_affiliation_string":"Department of Anatomy, Embryology & Physiology, Academic Medical Center, Amsterdam, 1100AZ, Netherlands. j.m.ruijter@amc.uva.nl","institution_ids":["https://openalex.org/I2802928900"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038097341","display_name":"Steve Lefever","orcid":"https://orcid.org/0000-0002-6936-8239"},"institutions":[{"id":"https://openalex.org/I12607205","display_name":"University College Ghent","ror":"https://ror.org/00rs45z86","country_code":"BE","type":"education","lineage":["https://openalex.org/I12607205"]},{"id":"https://openalex.org/I32597200","display_name":"Ghent University","ror":"https://ror.org/00cv9y106","country_code":"BE","type":"education","lineage":["https://openalex.org/I32597200"]},{"id":"https://openalex.org/I4210151194","display_name":"VIB-UGent Center for Medical Biotechnology","ror":"https://ror.org/04hbttm44","country_code":"BE","type":"facility","lineage":["https://openalex.org/I2802017950","https://openalex.org/I32597200","https://openalex.org/I4210151194"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Steve Lefever","raw_affiliation_strings":["Bioinformatics Institute Ghent, Ghent University, Ghent, B-9000, Belgium. steve.lefever@UGent.be","Center for Medical Genetics, Ghent University, Gent, B-9000, Belgium. steve.lefever@UGent.be"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute Ghent, Ghent University, Ghent, B-9000, Belgium. steve.lefever@UGent.be","institution_ids":["https://openalex.org/I32597200","https://openalex.org/I12607205"]},{"raw_affiliation_string":"Center for Medical Genetics, Ghent University, Gent, B-9000, Belgium. steve.lefever@UGent.be","institution_ids":["https://openalex.org/I32597200","https://openalex.org/I4210151194"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026817687","display_name":"Jasper Anckaert","orcid":"https://orcid.org/0000-0001-8144-4639"},"institutions":[{"id":"https://openalex.org/I12607205","display_name":"University College Ghent","ror":"https://ror.org/00rs45z86","country_code":"BE","type":"education","lineage":["https://openalex.org/I12607205"]},{"id":"https://openalex.org/I32597200","display_name":"Ghent University","ror":"https://ror.org/00cv9y106","country_code":"BE","type":"education","lineage":["https://openalex.org/I32597200"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Jasper Anckaert","raw_affiliation_strings":["Bioinformatics Institute Ghent, Ghent University, Ghent, B-9000, Belgium. jasper.anckaert@UGent.be","Center for Medical Genetics, Ghent University, Gent, B-9000, Belgium. jasper.anckaert@UGent.be"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Institute Ghent, Ghent University, Ghent, B-9000, Belgium. jasper.anckaert@UGent.be","institution_ids":["https://openalex.org/I32597200","https://openalex.org/I12607205"]},{"raw_affiliation_string":"Center for Medical Genetics, Ghent University, Gent, B-9000, Belgium. jasper.anckaert@UGent.be","institution_ids":["https://openalex.org/I32597200"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004924184","display_name":"Jan Hellemans","orcid":"https://orcid.org/0000-0003-0825-0031"},"institutions":[{"id":"https://openalex.org/I1295614966","display_name":"Helen Keller International","ror":"https://ror.org/04qxbzf60","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1295614966"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jan Hellemans","raw_affiliation_strings":["Biogazelle, Zwijnaarde, 9052, Belgium. Jan.Hellemans@Biogazelle.com"],"affiliations":[{"raw_affiliation_string":"Biogazelle, Zwijnaarde, 9052, Belgium. Jan.Hellemans@Biogazelle.com","institution_ids":["https://openalex.org/I1295614966"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032653169","display_name":"Michael W. Pfaffl","orcid":"https://orcid.org/0000-0002-3192-1019"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Michael W. Pfaffl","raw_affiliation_strings":["Physiology, Center of Life and Food Sciences, Technical University of Munich, Freising Weihenstephan, Munich, 85354, Germany. michael.pfaffl@wzw.tum.de"],"affiliations":[{"raw_affiliation_string":"Physiology, Center of Life and Food Sciences, Technical University of Munich, Freising Weihenstephan, Munich, 85354, Germany. michael.pfaffl@wzw.tum.de","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048071608","display_name":"Vladim\u0131\u0301r Bene\u0161","orcid":"https://orcid.org/0000-0002-0352-2547"},"institutions":[{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Vladimir Benes","raw_affiliation_strings":["Genomics Core Facility, European Molecular Biology Laboratory, Heidelberg, 69117, Germany. benes@embl.de"],"affiliations":[{"raw_affiliation_string":"Genomics Core Facility, European Molecular Biology Laboratory, Heidelberg, 69117, Germany. benes@embl.de","institution_ids":["https://openalex.org/I4210138560"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043596447","display_name":"Stephen A. Bustin","orcid":"https://orcid.org/0000-0003-1870-6098"},"institutions":[{"id":"https://openalex.org/I51216347","display_name":"Anglia Ruskin University","ror":"https://ror.org/0009t4v78","country_code":"GB","type":"education","lineage":["https://openalex.org/I51216347"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Stephen A. Bustin","raw_affiliation_strings":["Postgraduate Medical Institute, Anglia Ruskin University, Chelmsford, CM1 1SQ, UK. stephen.bustin@anglia.ac.uk"],"affiliations":[{"raw_affiliation_string":"Postgraduate Medical Institute, Anglia Ruskin University, Chelmsford, CM1 1SQ, UK. stephen.bustin@anglia.ac.uk","institution_ids":["https://openalex.org/I51216347"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086580140","display_name":"Jo Vandesompele","orcid":"https://orcid.org/0000-0001-6274-0184"},"institutions":[{"id":"https://openalex.org/I32597200","display_name":"Ghent University","ror":"https://ror.org/00cv9y106","country_code":"BE","type":"education","lineage":["https://openalex.org/I32597200"]}],"countries":["BE"],"is_corresponding":false,"raw_author_name":"Jo Vandesompele","raw_affiliation_strings":["Biogazelle, Zwijnaarde, 9052, Belgium. Joke.Vandesompele@UGent.be","Bioinformatics Institute Ghent, Ghent University, Ghent, B-9000, Belgium. Joke.Vandesompele@UGent.be","Center for Medical Genetics, Ghent University, Gent, B-9000, Belgium. Joke.Vandesompele@UGent.be"],"affiliations":[{"raw_affiliation_string":"Biogazelle, Zwijnaarde, 9052, Belgium. Joke.Vandesompele@UGent.be","institution_ids":["https://openalex.org/I32597200"]},{"raw_affiliation_string":"Bioinformatics Institute Ghent, Ghent University, Ghent, B-9000, Belgium. Joke.Vandesompele@UGent.be","institution_ids":["https://openalex.org/I32597200"]},{"raw_affiliation_string":"Center for Medical Genetics, Ghent University, Gent, B-9000, Belgium. Joke.Vandesompele@UGent.be","institution_ids":["https://openalex.org/I32597200"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5045519999","display_name":"Andreas Untergasser","orcid":null},"institutions":[{"id":"https://openalex.org/I223822909","display_name":"Heidelberg University","ror":"https://ror.org/038t36y30","country_code":"DE","type":"education","lineage":["https://openalex.org/I223822909"]},{"id":"https://openalex.org/I4210138560","display_name":"European Molecular Biology Laboratory","ror":"https://ror.org/03mstc592","country_code":"DE","type":"government","lineage":["https://openalex.org/I4210138560"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"Andreas Untergasser","raw_affiliation_strings":["Center of Molecular Biology (ZMBH), Heidelberg University, Im Neuenheimer Feld 282, Heidelberg, 69120, Germany. andreas@untergasser.de","Genomics Core Facility, European Molecular Biology Laboratory, Heidelberg, 69117, Germany. andreas@untergasser.de"],"affiliations":[{"raw_affiliation_string":"Center of Molecular Biology (ZMBH), Heidelberg University, Im Neuenheimer Feld 282, Heidelberg, 69120, Germany. andreas@untergasser.de","institution_ids":["https://openalex.org/I223822909"]},{"raw_affiliation_string":"Genomics Core Facility, European Molecular Biology Laboratory, Heidelberg, 69117, Germany. andreas@untergasser.de","institution_ids":["https://openalex.org/I4210138560"]}]}],"institutions":[],"countries_distinct_count":5,"institutions_distinct_count":9,"corresponding_author_ids":["https://openalex.org/A5110235738"],"corresponding_institution_ids":["https://openalex.org/I2802928900"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":1.1164,"has_fulltext":true,"cited_by_count":21,"citation_normalized_percentile":{"value":0.7595642,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"16","issue":"1","first_page":"197","last_page":"197"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11948","display_name":"Machine Learning in Materials Science","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11949","display_name":"Nuclear Physics and Applications","score":0.9718999862670898,"subfield":{"id":"https://openalex.org/subfields/3108","display_name":"Radiation"},"field":{"id":"https://openalex.org/fields/31","display_name":"Physics and Astronomy"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9605000019073486,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7397240400314331},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.7225470542907715},{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.6342829465866089},{"id":"https://openalex.org/keywords/data-exchange","display_name":"Data exchange","score":0.6209374666213989},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6078334450721741},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.5991379618644714},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5564202666282654},{"id":"https://openalex.org/keywords/file-format","display_name":"File format","score":0.5518147945404053},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.5380491614341736},{"id":"https://openalex.org/keywords/implementation","display_name":"Implementation","score":0.43439945578575134},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.43098676204681396},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3749261498451233},{"id":"https://openalex.org/keywords/software-engineering","display_name":"Software engineering","score":0.28538674116134644},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.18503957986831665},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14085176587104797}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7397240400314331},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.7225470542907715},{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.6342829465866089},{"id":"https://openalex.org/C15845906","wikidata":"https://www.wikidata.org/wiki/Q1172338","display_name":"Data exchange","level":2,"score":0.6209374666213989},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6078334450721741},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.5991379618644714},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5564202666282654},{"id":"https://openalex.org/C97250363","wikidata":"https://www.wikidata.org/wiki/Q235557","display_name":"File format","level":2,"score":0.5518147945404053},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.5380491614341736},{"id":"https://openalex.org/C26713055","wikidata":"https://www.wikidata.org/wiki/Q245962","display_name":"Implementation","level":2,"score":0.43439945578575134},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.43098676204681396},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3749261498451233},{"id":"https://openalex.org/C115903868","wikidata":"https://www.wikidata.org/wiki/Q80993","display_name":"Software engineering","level":1,"score":0.28538674116134644},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.18503957986831665},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14085176587104797},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D003195","descriptor_name":"Computer Communication Networks","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016133","descriptor_name":"Polymerase Chain Reaction","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":7,"locations":[{"id":"doi:10.1186/s12859-015-0637-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-015-0637-6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0637-6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:26087842","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/26087842","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pure.amsterdamumc.nl:openaire/7a447eb1-213d-4888-beba-deddabae32ad","is_oa":true,"landing_page_url":"https://pure.amsterdamumc.nl/en/publications/7a447eb1-213d-4888-beba-deddabae32ad","pdf_url":null,"source":{"id":"https://openalex.org/S7407055222","display_name":"Pure Amsterdam UMC","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Ruijter, J M, Lefever, S, Anckaert, J, Hellemans, J, Pfaffl, M W, Benes, V, Bustin, S A, Vandesompele, J & Untergasser, A 2015, 'RDML-Ninja and RDMLdb for standardized exchange of qPCR data', BMC bioinformatics, vol. 16, pp. 197. https://doi.org/10.1186/s12859-015-0637-6","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:amcpub:oai:pure.amc.nl:publications/4265f044-87ea-4682-9e17-d677d0e369ba","is_oa":false,"landing_page_url":"https://pure.amc.nl/en/publications/rdmlninja-and-rdmldb-for-standardized-exchange-of-qpcr-data(4265f044-87ea-4682-9e17-d677d0e369ba).html","pdf_url":null,"source":{"id":"https://openalex.org/S4306401843","display_name":"Data Archiving and Networked Services (DANS)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1322597698","host_organization_name":"Royal Netherlands Academy of Arts and Sciences","host_organization_lineage":["https://openalex.org/I1322597698"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC bioinformatics, 16. BioMed Central","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:archive.ugent.be:7207048","is_oa":true,"landing_page_url":"https://biblio.ugent.be/publication/7207048","pdf_url":null,"source":{"id":"https://openalex.org/S4306400478","display_name":"Ghent University Academic Bibliography (Ghent University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I32597200","host_organization_name":"Ghent University","host_organization_lineage":["https://openalex.org/I32597200"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 1471-2105","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:europepmc.org:3435676","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4474546","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4474546","is_oa":true,"landing_page_url":"http://doi.org/10.1186/s12859-015-0637-6","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/s12859-015-0637-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-015-0637-6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0637-6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.6000000238418579,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2101731663.pdf","grobid_xml":"https://content.openalex.org/works/W2101731663.grobid-xml"},"referenced_works_count":9,"referenced_works":["https://openalex.org/W2049284870","https://openalex.org/W2136212493","https://openalex.org/W2136309995","https://openalex.org/W2138581811","https://openalex.org/W2162098634","https://openalex.org/W2168420558","https://openalex.org/W2173292682","https://openalex.org/W2726265290","https://openalex.org/W2794349527"],"related_works":["https://openalex.org/W4378651134","https://openalex.org/W2944823289","https://openalex.org/W2387091653","https://openalex.org/W2951882034","https://openalex.org/W2729361100","https://openalex.org/W2360090174","https://openalex.org/W2548889983","https://openalex.org/W2380990124","https://openalex.org/W2018286447","https://openalex.org/W2364868684"],"abstract_inverted_index":null,"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":2},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2}],"updated_date":"2026-03-12T08:34:05.389933","created_date":"2025-10-10T00:00:00"}
