{"id":"https://openalex.org/W2052088404","doi":"https://doi.org/10.1186/s12859-015-0513-4","title":"USI: a fast and accurate approach for conceptual document annotation","display_name":"USI: a fast and accurate approach for conceptual document annotation","publication_year":2015,"publication_date":"2015-03-13","ids":{"openalex":"https://openalex.org/W2052088404","doi":"https://doi.org/10.1186/s12859-015-0513-4","mag":"2052088404","pmid":"https://pubmed.ncbi.nlm.nih.gov/25887746"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-015-0513-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-015-0513-4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0513-4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0513-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5075746125","display_name":"Nicolas Fiorini","orcid":"https://orcid.org/0000-0002-9260-1326"},"institutions":[{"id":"https://openalex.org/I4210127738","display_name":"IMT Mines Al\u00e8s","ror":"https://ror.org/03e8rf594","country_code":"FR","type":"education","lineage":["https://openalex.org/I205703379","https://openalex.org/I4210127738"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"Nicolas Fiorini","raw_affiliation_strings":["LGI2P research center from the Ecole des mines d'Al\u00e8s, Site de N\u00eemes, Parc scientifique G. Besse, N\u00eemes cedex 1, 30035, France. nicolas.fiorini@mines-ales.fr","LGI2P research center from the Ecole des mines d\u2019Al\u00e8s, Site de N\u00eemes, N\u00eemes cedex 1, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LGI2P research center from the Ecole des mines d'Al\u00e8s, Site de N\u00eemes, Parc scientifique G. Besse, N\u00eemes cedex 1, 30035, France. nicolas.fiorini@mines-ales.fr","institution_ids":["https://openalex.org/I4210127738"]},{"raw_affiliation_string":"LGI2P research center from the Ecole des mines d\u2019Al\u00e8s, Site de N\u00eemes, N\u00eemes cedex 1, France","institution_ids":["https://openalex.org/I4210127738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072128914","display_name":"Sylvie Ranwez","orcid":"https://orcid.org/0000-0002-8707-0313"},"institutions":[{"id":"https://openalex.org/I4210127738","display_name":"IMT Mines Al\u00e8s","ror":"https://ror.org/03e8rf594","country_code":"FR","type":"education","lineage":["https://openalex.org/I205703379","https://openalex.org/I4210127738"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Sylvie Ranwez","raw_affiliation_strings":["LGI2P research center from the Ecole des mines d'Al\u00e8s, Site de N\u00eemes, Parc scientifique G. Besse, N\u00eemes cedex 1, 30035, France. sylvie.ranwez@mines-ales.fr","LGI2P research center from the Ecole des mines d\u2019Al\u00e8s, Site de N\u00eemes, N\u00eemes cedex 1, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LGI2P research center from the Ecole des mines d'Al\u00e8s, Site de N\u00eemes, Parc scientifique G. Besse, N\u00eemes cedex 1, 30035, France. sylvie.ranwez@mines-ales.fr","institution_ids":["https://openalex.org/I4210127738"]},{"raw_affiliation_string":"LGI2P research center from the Ecole des mines d\u2019Al\u00e8s, Site de N\u00eemes, N\u00eemes cedex 1, France","institution_ids":["https://openalex.org/I4210127738"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019212344","display_name":"Jacky Montmain","orcid":"https://orcid.org/0000-0003-0918-5788"},"institutions":[{"id":"https://openalex.org/I4210127738","display_name":"IMT Mines Al\u00e8s","ror":"https://ror.org/03e8rf594","country_code":"FR","type":"education","lineage":["https://openalex.org/I205703379","https://openalex.org/I4210127738"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Jacky Montmain","raw_affiliation_strings":["LGI2P research center from the Ecole des mines d'Al\u00e8s, Site de N\u00eemes, Parc scientifique G. Besse, N\u00eemes cedex 1, 30035, France. jacky.montmain@mines-ales.fr","LGI2P research center from the Ecole des mines d\u2019Al\u00e8s, Site de N\u00eemes, N\u00eemes cedex 1, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"LGI2P research center from the Ecole des mines d'Al\u00e8s, Site de N\u00eemes, Parc scientifique G. Besse, N\u00eemes cedex 1, 30035, France. jacky.montmain@mines-ales.fr","institution_ids":["https://openalex.org/I4210127738"]},{"raw_affiliation_string":"LGI2P research center from the Ecole des mines d\u2019Al\u00e8s, Site de N\u00eemes, N\u00eemes cedex 1, France","institution_ids":["https://openalex.org/I4210127738"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5025043496","display_name":"Vincent Ranwez","orcid":"https://orcid.org/0000-0002-9308-7541"},"institutions":[{"id":"https://openalex.org/I131077856","display_name":"Centre de Coop\u00e9ration Internationale en Recherche Agronomique pour le D\u00e9veloppement","ror":"https://ror.org/05kpkpg04","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856"]},{"id":"https://openalex.org/I24906876","display_name":"Institut Agro Montpellier","ror":"https://ror.org/03rnk6m14","country_code":"FR","type":"education","lineage":["https://openalex.org/I24906876","https://openalex.org/I4210117091","https://openalex.org/I4399657933"]},{"id":"https://openalex.org/I4210120904","display_name":"Am\u00e9lioration G\u00e9n\u00e9tique et Adaptation des Plantes m\u00e9diterran\u00e9ennes et tropicales","ror":"https://ror.org/02w4exq36","country_code":"FR","type":"facility","lineage":["https://openalex.org/I131077856","https://openalex.org/I19894307","https://openalex.org/I24906876","https://openalex.org/I4210088668","https://openalex.org/I4210117091","https://openalex.org/I4210120904","https://openalex.org/I4399657933"]},{"id":"https://openalex.org/I4210136436","display_name":"Institut Agro Montpelier","ror":null,"country_code":"FR","type":null,"lineage":["https://openalex.org/I4210136436"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"Vincent Ranwez","raw_affiliation_strings":["UMR AGAP, Montpellier SupAgro/CIRAD/INRA, 2 place Pierre Viala, Montpellier Cedex 1, 34060, France. ranwez@supagro.inra.fr","UMR AGAP, Montpellier SupAgro/CIRAD/INRA, Montpellier Cedex 1, France"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"UMR AGAP, Montpellier SupAgro/CIRAD/INRA, 2 place Pierre Viala, Montpellier Cedex 1, 34060, France. ranwez@supagro.inra.fr","institution_ids":["https://openalex.org/I131077856","https://openalex.org/I4210136436"]},{"raw_affiliation_string":"UMR AGAP, Montpellier SupAgro/CIRAD/INRA, Montpellier Cedex 1, France","institution_ids":["https://openalex.org/I131077856","https://openalex.org/I24906876","https://openalex.org/I4210120904"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5075746125"],"corresponding_institution_ids":["https://openalex.org/I4210127738"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":0.8254,"has_fulltext":true,"cited_by_count":10,"citation_normalized_percentile":{"value":0.71941375,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"16","issue":"1","first_page":"83","last_page":"83"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9430999755859375,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9430999755859375,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.016899999231100082,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.008299999870359898,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8585107326507568},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.770078182220459},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6466319561004639},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6409653425216675},{"id":"https://openalex.org/keywords/search-engine-indexing","display_name":"Search engine indexing","score":0.6258600354194641},{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.6060256361961365},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5318058729171753},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4960819184780121},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.4557667374610901},{"id":"https://openalex.org/keywords/process","display_name":"Process (computing)","score":0.4485829174518585},{"id":"https://openalex.org/keywords/thesaurus","display_name":"Thesaurus","score":0.42146044969558716},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.41401153802871704},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.41057002544403076},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.27975165843963623}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8585107326507568},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.770078182220459},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6466319561004639},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6409653425216675},{"id":"https://openalex.org/C75165309","wikidata":"https://www.wikidata.org/wiki/Q2258979","display_name":"Search engine indexing","level":2,"score":0.6258600354194641},{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.6060256361961365},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5318058729171753},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4960819184780121},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.4557667374610901},{"id":"https://openalex.org/C98045186","wikidata":"https://www.wikidata.org/wiki/Q205663","display_name":"Process (computing)","level":2,"score":0.4485829174518585},{"id":"https://openalex.org/C2778698081","wikidata":"https://www.wikidata.org/wiki/Q179797","display_name":"Thesaurus","level":2,"score":0.42146044969558716},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.41401153802871704},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.41057002544403076},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.27975165843963623},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000043","descriptor_name":"Abstracting and Indexing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D009323","descriptor_name":"Natural Language Processing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010363","descriptor_name":"Pattern Recognition, Automated","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012660","descriptor_name":"Semantics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018875","descriptor_name":"Vocabulary, Controlled","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D046650","descriptor_name":"Medical Subject Headings","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-015-0513-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-015-0513-4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0513-4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25887746","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25887746","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:4367850","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4367850","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC Bioinformatics","raw_type":"Text"},{"id":"pmh:oai:HAL:hal-01140600v1","is_oa":false,"landing_page_url":"https://hal.archives-ouvertes.fr/hal-01140600","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN: 1471-2105","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:HAL:hal-01288389v1","is_oa":false,"landing_page_url":"https://hal.science/hal-01288389","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bmcbioinformatics.biomedcentral.com/articles/10.1186/s12859-015-0513-4","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s12859-015-0513-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-015-0513-4","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0513-4","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.5699999928474426,"id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G7240651115","display_name":null,"funder_award_id":"ANR-10","funder_id":"https://openalex.org/F4320320883","funder_display_name":"Agence Nationale de la Recherche"}],"funders":[{"id":"https://openalex.org/F4320319344","display_name":"Alliance Nationale pour les Sciences de la Vie et de la Sant\u00e9","ror":"https://ror.org/05g3p2p60"},{"id":"https://openalex.org/F4320320883","display_name":"Agence Nationale de la Recherche","ror":"https://ror.org/00rbzpz17"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2052088404.pdf","grobid_xml":"https://content.openalex.org/works/W2052088404.grobid-xml"},"referenced_works_count":43,"referenced_works":["https://openalex.org/W42500033","https://openalex.org/W99501648","https://openalex.org/W102787101","https://openalex.org/W148665339","https://openalex.org/W173202579","https://openalex.org/W1034019924","https://openalex.org/W1524408959","https://openalex.org/W1541469344","https://openalex.org/W1550258693","https://openalex.org/W1622032990","https://openalex.org/W1647729745","https://openalex.org/W1659833910","https://openalex.org/W1660390307","https://openalex.org/W1668989518","https://openalex.org/W1928047241","https://openalex.org/W2043504339","https://openalex.org/W2057803903","https://openalex.org/W2061172803","https://openalex.org/W2071038402","https://openalex.org/W2075606949","https://openalex.org/W2078990125","https://openalex.org/W2088339844","https://openalex.org/W2095760507","https://openalex.org/W2097553584","https://openalex.org/W2099396217","https://openalex.org/W2099908986","https://openalex.org/W2105588112","https://openalex.org/W2108862644","https://openalex.org/W2114535528","https://openalex.org/W2115024484","https://openalex.org/W2116373735","https://openalex.org/W2121343862","https://openalex.org/W2148130205","https://openalex.org/W2149806153","https://openalex.org/W2152143870","https://openalex.org/W2160171761","https://openalex.org/W2161653775","https://openalex.org/W2164290176","https://openalex.org/W2182889308","https://openalex.org/W2394935951","https://openalex.org/W2500888265","https://openalex.org/W6604181502","https://openalex.org/W6683709678"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W1533177136","https://openalex.org/W3024364549","https://openalex.org/W4380994516"],"abstract_inverted_index":{"BACKGROUND:":[0],"Semantic":[1,90,169],"approaches":[2,186],"such":[3,28],"as":[4],"concept-based":[5],"information":[6],"retrieval":[7],"rely":[8],"on":[9,113,164],"a":[10,21,49,92,102,106,132,174,189,194],"corpus":[11],"in":[12,53,144],"which":[13],"resources":[14],"are":[15,152],"indexed":[16,116],"by":[17,124,187],"concepts":[18],"belonging":[19],"to":[20,26,34,38,67,104,121],"domain":[22,56],"ontology.":[23,60],"In":[24,83],"order":[25],"keep":[27],"applications":[29],"up-to-date,":[30],"new":[31,110],"entities":[32,111],"need":[33,173],"be":[35],"frequently":[36],"annotated":[37],"enrich":[39],"the":[40,55,58,77,80,128,139,167,184],"corpus.":[41],"However,":[42],"this":[43,69,84],"task":[44],"is":[45],"time-consuming":[46],"and":[47,57,94,131,149,157],"requires":[48],"high-level":[50],"of":[51,79,134,146,199],"expertise":[52],"both":[54,147],"related":[59,114],"Different":[61],"strategies":[62],"have":[63],"thus":[64],"been":[65],"proposed":[66],"ease":[68],"indexing":[70,98],"process,":[71],"each":[72],"one":[73,200],"taking":[74],"advantage":[75],"from":[76],"features":[78],"document.":[81],"RESULTS:":[82],"paper":[85],"we":[86],"present":[87],"USI":[88],"(User-oriented":[89],"Indexer),":[91],"fast":[93],"intuitive":[95],"method":[96,140],"for":[97,109],"tasks.":[99],"We":[100],"introduce":[101],"solution":[103],"suggest":[105],"conceptual":[107],"annotation":[108,191],"based":[112],"already":[115],"documents.":[117],"Our":[118],"results,":[119],"compared":[120],"those":[122],"obtained":[123],"previous":[125],"authors":[126],"using":[127],"MeSH":[129],"thesaurus":[130],"dataset":[133],"biomedical":[135],"papers,":[136],"show":[137],"that":[138],"surpasses":[141],"text-specific":[142],"methods":[143],"terms":[145],"quality":[148],"speed.":[150],"Evaluations":[151],"done":[153],"via":[154],"usual":[155],"metrics":[156],"semantic":[158],"similarity.":[159],"CONCLUSIONS:":[160],"By":[161],"only":[162],"relying":[163],"neighbor":[165],"documents,":[166],"User-oriented":[168],"Indexer":[170],"does":[171],"not":[172],"representative":[175],"learning":[176],"set.":[177],"Yet,":[178],"it":[179],"provides":[180],"better":[181],"results":[182],"than":[183],"other":[185],"giving":[188],"consistent":[190],"scored":[192],"with":[193],"global":[195],"criterion":[196],"-":[197],"instead":[198],"score":[201],"per":[202],"concept.":[203]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
