{"id":"https://openalex.org/W2081210792","doi":"https://doi.org/10.1186/s12859-015-0511-6","title":"Automatic segmentation of deep intracerebral electrodes in computed tomography scans","display_name":"Automatic segmentation of deep intracerebral electrodes in computed tomography scans","publication_year":2015,"publication_date":"2015-03-24","ids":{"openalex":"https://openalex.org/W2081210792","doi":"https://doi.org/10.1186/s12859-015-0511-6","mag":"2081210792","pmid":"https://pubmed.ncbi.nlm.nih.gov/25887573"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-015-0511-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-015-0511-6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0511-6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0511-6","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5053092854","display_name":"Gabriele Arnulfo","orcid":"https://orcid.org/0000-0002-1140-0320"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I83816512","display_name":"University of Genoa","ror":"https://ror.org/0107c5v14","country_code":"IT","type":"education","lineage":["https://openalex.org/I83816512"]}],"countries":["FI","IT"],"is_corresponding":true,"raw_author_name":"Gabriele Arnulfo","raw_affiliation_strings":["Department of Informatics, Bioengineering, Robotics and System Engineering - DIBRIS, University of Genoa, Viale Causa 13, Genoa, Italy. gabriele.arnulfo@unige.it","Neuroscience Center, University of Helsinki, P.O. Box 56 (Viikinkaari 4) FI-00014, Helsinki, Finland. gabriele.arnulfo@unige.it"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Bioengineering, Robotics and System Engineering - DIBRIS, University of Genoa, Viale Causa 13, Genoa, Italy. gabriele.arnulfo@unige.it","institution_ids":["https://openalex.org/I83816512"]},{"raw_affiliation_string":"Neuroscience Center, University of Helsinki, P.O. Box 56 (Viikinkaari 4) FI-00014, Helsinki, Finland. gabriele.arnulfo@unige.it","institution_ids":["https://openalex.org/I133731052"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101575386","display_name":"Massimo Narizzano","orcid":"https://orcid.org/0000-0002-0268-4843"},"institutions":[{"id":"https://openalex.org/I83816512","display_name":"University of Genoa","ror":"https://ror.org/0107c5v14","country_code":"IT","type":"education","lineage":["https://openalex.org/I83816512"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Massimo Narizzano","raw_affiliation_strings":["Department of Informatics, Bioengineering, Robotics and System Engineering - DIBRIS, University of Genoa, Viale Causa 13, Genoa, Italy. massimo.narizzano@unige.it"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Bioengineering, Robotics and System Engineering - DIBRIS, University of Genoa, Viale Causa 13, Genoa, Italy. massimo.narizzano@unige.it","institution_ids":["https://openalex.org/I83816512"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035506421","display_name":"Francesco Cardinale","orcid":"https://orcid.org/0000-0002-5141-9202"},"institutions":[{"id":"https://openalex.org/I4210087357","display_name":"Ospedale Maggiore","ror":"https://ror.org/0053ctp29","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210087357"]},{"id":"https://openalex.org/I4210094195","display_name":"Azienda Socio Sanitaria Territoriale Grande Ospedale Metropolitano Niguarda","ror":"https://ror.org/00htrxv69","country_code":"IT","type":"healthcare","lineage":["https://openalex.org/I4210094195"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Francesco Cardinale","raw_affiliation_strings":["C. Munari Centre for Epilepsy Surgery, Niguarda Hospital, Piazza Ospedale Maggiore 3, Milano, Italy. francesco.cardinale@ospedaleniguarda.it"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"C. Munari Centre for Epilepsy Surgery, Niguarda Hospital, Piazza Ospedale Maggiore 3, Milano, Italy. francesco.cardinale@ospedaleniguarda.it","institution_ids":["https://openalex.org/I4210087357","https://openalex.org/I4210094195"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003373369","display_name":"Marco Fato","orcid":"https://orcid.org/0000-0001-8085-2438"},"institutions":[{"id":"https://openalex.org/I83816512","display_name":"University of Genoa","ror":"https://ror.org/0107c5v14","country_code":"IT","type":"education","lineage":["https://openalex.org/I83816512"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Marco Massimo Fato","raw_affiliation_strings":["Department of Informatics, Bioengineering, Robotics and System Engineering - DIBRIS, University of Genoa, Viale Causa 13, Genoa, Italy. marco.fato@unige.it"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Informatics, Bioengineering, Robotics and System Engineering - DIBRIS, University of Genoa, Viale Causa 13, Genoa, Italy. marco.fato@unige.it","institution_ids":["https://openalex.org/I83816512"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5102991473","display_name":"J. Matias Palva","orcid":"https://orcid.org/0000-0003-1885-2749"},"institutions":[{"id":"https://openalex.org/I133731052","display_name":"University of Helsinki","ror":"https://ror.org/040af2s02","country_code":"FI","type":"education","lineage":["https://openalex.org/I133731052"]},{"id":"https://openalex.org/I2800229700","display_name":"Helsinki Institute of Physics","ror":"https://ror.org/01x2x1522","country_code":"FI","type":"facility","lineage":["https://openalex.org/I133731052","https://openalex.org/I2800229700","https://openalex.org/I63548447","https://openalex.org/I94722563","https://openalex.org/I9927081"]}],"countries":["FI"],"is_corresponding":false,"raw_author_name":"Jaakko Matias Palva","raw_affiliation_strings":["Neuroscience Center, University of Helsinki, P.O. Box 56 (Viikinkaari 4) FI-00014, Helsinki, Finland. matias.palva@helsinki.fi"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Neuroscience Center, University of Helsinki, P.O. Box 56 (Viikinkaari 4) FI-00014, Helsinki, Finland. matias.palva@helsinki.fi","institution_ids":["https://openalex.org/I133731052","https://openalex.org/I2800229700"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5053092854"],"corresponding_institution_ids":["https://openalex.org/I133731052","https://openalex.org/I83816512"],"apc_list":{"value":1690,"currency":"GBP","value_usd":2072},"apc_paid":{"value":1690,"currency":"GBP","value_usd":2072},"fwci":3.3305,"has_fulltext":true,"cited_by_count":63,"citation_normalized_percentile":{"value":0.92387019,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"16","issue":"1","first_page":"99","last_page":"99"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10429","display_name":"EEG and Brain-Computer Interfaces","score":0.5310999751091003,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10429","display_name":"EEG and Brain-Computer Interfaces","score":0.5310999751091003,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10052","display_name":"Medical Image Segmentation Techniques","score":0.11159999668598175,"subfield":{"id":"https://openalex.org/subfields/1707","display_name":"Computer Vision and Pattern Recognition"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11778","display_name":"Electrical and Bioimpedance Tomography","score":0.0729999989271164,"subfield":{"id":"https://openalex.org/subfields/2208","display_name":"Electrical and Electronic Engineering"},"field":{"id":"https://openalex.org/fields/22","display_name":"Engineering"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/stereoelectroencephalography","display_name":"Stereoelectroencephalography","score":0.8708189725875854},{"id":"https://openalex.org/keywords/segmentation","display_name":"Segmentation","score":0.7315587401390076},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6397162675857544},{"id":"https://openalex.org/keywords/interpretability","display_name":"Interpretability","score":0.5531083345413208},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.5380178689956665},{"id":"https://openalex.org/keywords/surgical-planning","display_name":"Surgical planning","score":0.44891223311424255},{"id":"https://openalex.org/keywords/computer-vision","display_name":"Computer vision","score":0.44746384024620056},{"id":"https://openalex.org/keywords/biomedical-engineering","display_name":"Biomedical engineering","score":0.4096912145614624},{"id":"https://openalex.org/keywords/pattern-recognition","display_name":"Pattern recognition (psychology)","score":0.38220202922821045},{"id":"https://openalex.org/keywords/epilepsy-surgery","display_name":"Epilepsy surgery","score":0.35376888513565063},{"id":"https://openalex.org/keywords/electroencephalography","display_name":"Electroencephalography","score":0.28619086742401123},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.2522161900997162},{"id":"https://openalex.org/keywords/radiology","display_name":"Radiology","score":0.23553210496902466}],"concepts":[{"id":"https://openalex.org/C98254291","wikidata":"https://www.wikidata.org/wiki/Q7611238","display_name":"Stereoelectroencephalography","level":4,"score":0.8708189725875854},{"id":"https://openalex.org/C89600930","wikidata":"https://www.wikidata.org/wiki/Q1423946","display_name":"Segmentation","level":2,"score":0.7315587401390076},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6397162675857544},{"id":"https://openalex.org/C2781067378","wikidata":"https://www.wikidata.org/wiki/Q17027399","display_name":"Interpretability","level":2,"score":0.5531083345413208},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.5380178689956665},{"id":"https://openalex.org/C2779370443","wikidata":"https://www.wikidata.org/wiki/Q1776627","display_name":"Surgical planning","level":2,"score":0.44891223311424255},{"id":"https://openalex.org/C31972630","wikidata":"https://www.wikidata.org/wiki/Q844240","display_name":"Computer vision","level":1,"score":0.44746384024620056},{"id":"https://openalex.org/C136229726","wikidata":"https://www.wikidata.org/wiki/Q327092","display_name":"Biomedical engineering","level":1,"score":0.4096912145614624},{"id":"https://openalex.org/C153180895","wikidata":"https://www.wikidata.org/wiki/Q7148389","display_name":"Pattern recognition (psychology)","level":2,"score":0.38220202922821045},{"id":"https://openalex.org/C2780803581","wikidata":"https://www.wikidata.org/wiki/Q1347108","display_name":"Epilepsy surgery","level":3,"score":0.35376888513565063},{"id":"https://openalex.org/C522805319","wikidata":"https://www.wikidata.org/wiki/Q179965","display_name":"Electroencephalography","level":2,"score":0.28619086742401123},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.2522161900997162},{"id":"https://openalex.org/C126838900","wikidata":"https://www.wikidata.org/wiki/Q77604","display_name":"Radiology","level":1,"score":0.23553210496902466},{"id":"https://openalex.org/C118552586","wikidata":"https://www.wikidata.org/wiki/Q7867","display_name":"Psychiatry","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000293","descriptor_name":"Adolescent","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000293","descriptor_name":"Adolescent","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000293","descriptor_name":"Adolescent","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D004566","descriptor_name":"Electrodes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004566","descriptor_name":"Electrodes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004566","descriptor_name":"Electrodes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004569","descriptor_name":"Electroencephalography","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D004569","descriptor_name":"Electroencephalography","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D004569","descriptor_name":"Electroencephalography","qualifier_ui":"Q000295","qualifier_name":"instrumentation","is_major_topic":false},{"descriptor_ui":"D004569","descriptor_name":"Electroencephalography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004569","descriptor_name":"Electroencephalography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004569","descriptor_name":"Electroencephalography","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D004827","descriptor_name":"Epilepsy","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D004827","descriptor_name":"Epilepsy","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D004827","descriptor_name":"Epilepsy","qualifier_ui":"Q000000981","qualifier_name":"diagnostic imaging","is_major_topic":false},{"descriptor_ui":"D004827","descriptor_name":"Epilepsy","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D004827","descriptor_name":"Epilepsy","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D004827","descriptor_name":"Epilepsy","qualifier_ui":"Q000503","qualifier_name":"physiopathology","is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008875","descriptor_name":"Middle Aged","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D054893","descriptor_name":"Cone-Beam Computed Tomography","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054893","descriptor_name":"Cone-Beam Computed Tomography","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054893","descriptor_name":"Cone-Beam Computed Tomography","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055815","descriptor_name":"Young Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055815","descriptor_name":"Young Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055815","descriptor_name":"Young Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1186/s12859-015-0511-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-015-0511-6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0511-6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25887573","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25887573","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3358445","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4393625","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:helda.helsinki.fi:10138/155601","is_oa":true,"landing_page_url":"http://hdl.handle.net/10138/155601","pdf_url":null,"source":{"id":"https://openalex.org/S4210213322","display_name":"Ty\u00f6v\u00e4entutkimus Vuosikirja","issn_l":"0784-1272","issn":["0784-1272","1459-7780"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"http://purl.org/eprint/entityType/ScholarlyWork"},{"id":"pmh:oai:helda.helsinki.fi:10138/159099","is_oa":true,"landing_page_url":"http://hdl.handle.net/10138/159099","pdf_url":null,"source":{"id":"https://openalex.org/S4210213322","display_name":"Ty\u00f6v\u00e4entutkimus Vuosikirja","issn_l":"0784-1272","issn":["0784-1272","1459-7780"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"http://purl.org/eprint/entityType/ScholarlyWork"},{"id":"pmh:oai:helda.helsinki.fi:10138/162777","is_oa":true,"landing_page_url":"http://hdl.handle.net/10138/162777","pdf_url":null,"source":{"id":"https://openalex.org/S4210213322","display_name":"Ty\u00f6v\u00e4entutkimus Vuosikirja","issn_l":"0784-1272","issn":["0784-1272","1459-7780"],"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:iris.unige.it:11567/811688","is_oa":true,"landing_page_url":"http://hdl.handle.net/11567/811688","pdf_url":null,"source":{"id":"https://openalex.org/S4377196291","display_name":"CINECA IRIS Institutial Research Information System (University of Genoa)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I83816512","host_organization_name":"University of Genoa","host_organization_lineage":["https://openalex.org/I83816512"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1186/s12859-015-0511-6","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-015-0511-6","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-015-0511-6","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1095062678","display_name":null,"funder_award_id":"604102","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G3829048491","display_name":null,"funder_award_id":"FP7/2007-2013","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5593277320","display_name":null,"funder_award_id":"2007-2013","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G5702163051","display_name":null,"funder_award_id":"FP7/2007","funder_id":"https://openalex.org/F4320320300","funder_display_name":"European Commission"},{"id":"https://openalex.org/G6920276429","display_name":null,"funder_award_id":"12938","funder_id":"https://openalex.org/F4320321726","funder_display_name":"Suomen Kulttuurirahasto"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321726","display_name":"Suomen Kulttuurirahasto","ror":"https://ror.org/027xav248"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2081210792.pdf","grobid_xml":"https://content.openalex.org/works/W2081210792.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W1479790262","https://openalex.org/W1489994409","https://openalex.org/W1972014607","https://openalex.org/W1973039712","https://openalex.org/W1976965104","https://openalex.org/W2001796002","https://openalex.org/W2014902342","https://openalex.org/W2025494266","https://openalex.org/W2032537396","https://openalex.org/W2041935477","https://openalex.org/W2048865199","https://openalex.org/W2056072423","https://openalex.org/W2059371456","https://openalex.org/W2072982627","https://openalex.org/W2093714112","https://openalex.org/W2108423179","https://openalex.org/W2115611758","https://openalex.org/W2117082366","https://openalex.org/W2138983530","https://openalex.org/W2142181855","https://openalex.org/W2149284055","https://openalex.org/W2157877092","https://openalex.org/W2158467570","https://openalex.org/W2161472384","https://openalex.org/W2314564824"],"related_works":["https://openalex.org/W3164646353","https://openalex.org/W4221121000","https://openalex.org/W4214530975","https://openalex.org/W3181245817","https://openalex.org/W3030688220","https://openalex.org/W2957019744","https://openalex.org/W3105171615","https://openalex.org/W4386265745","https://openalex.org/W4235097159","https://openalex.org/W2796810183"],"abstract_inverted_index":{"BACKGROUND:":[0],"Invasive":[1],"monitoring":[2],"of":[3,8,41,44,57,63,86,131,143,170,183,219,239,272,289,299,313],"brain":[4],"activity":[5],"by":[6,193,317],"means":[7],"intracerebral":[9,64],"electrodes":[10,46,65],"is":[11,29,47,69,200,214,259],"widely":[12],"practiced":[13],"to":[14,32,49,92,107,232,286,307],"improve":[15],"pre-surgical":[16],"seizure":[17],"onset":[18],"zone":[19,36],"localization":[20,62],"in":[21,90,173,320],"patients":[22],"with":[23,216],"medically":[24],"refractory":[25],"seizures.":[26],"Stereo-Electroencephalography":[27],"(SEEG)":[28],"mainly":[30],"used":[31,306],"localize":[33],"the":[34,42,45,51,55,61,84,94,128,148,197,237,250,257,273,287,292,297,310],"epileptogenic":[35],"and":[37,54,81,133,225,245,323],"a":[38,112,140,168,181,210,318,321],"precise":[39],"knowledge":[40],"location":[43],"expected":[48],"facilitate":[50],"recordings":[52],"interpretation":[53],"planning":[56],"resective":[58],"surgery.":[59,281],"However,":[60],"on":[66,127,159,167],"post-implant":[67,114],"acquisitions":[68],"usually":[70],"time-consuming":[71],"(i.e.,":[72,205],"manual":[73,203],"segmentation),":[74],"it":[75,82,227],"requires":[76],"advanced":[77],"3D":[78],"visualization":[79],"tools,":[80],"needs":[83],"supervision":[85],"trained":[87],"medical":[88],"doctors":[89],"order":[91],"minimize":[93],"errors.":[95],"In":[96],"this":[97],"paper":[98],"we":[99,253],"propose":[100],"an":[101,153,217],"automated":[102],"segmentation":[103,204,298],"algorithm":[104,125,150,258,295],"specifically":[105],"designed":[106],"segment":[108],"SEEG":[109,230,300,314],"contacts":[110,316],"from":[111,277],"thresholded":[113],"Cone-Beam":[115],"CT":[116],"volume":[117],"(0.4":[118],"mm,":[119,121,224],"0.4":[120],"0.8":[122],"mm).":[123],"The":[124,175,302],"relies":[126],"planned":[129,279],"position":[130],"target":[132],"entry":[134],"points":[135],"for":[136,242,296],"each":[137],"electrode":[138,144,275,315],"as":[139],"first":[141,293],"estimation":[142],"axis.":[145],"We":[146,163],"implemented":[147],"proposed":[149],"into":[151],"DEETO,":[152],"open":[154],"source":[155],"C++":[156],"prototype":[157],"based":[158],"ITK":[160],"library.":[161],"RESULTS:":[162],"tested":[164],"our":[165,290],"implementation":[166],"cohort":[169,252],"28":[171],"subjects":[172,185],"total.":[174],"experimental":[176],"analysis,":[177],"carried":[178],"out":[179],"over":[180],"subset":[182],"12":[184,270],"(35":[186],"multilead":[187],"electrodes;":[188],"200":[189],"contacts)":[190],"manually":[191],"segmented":[192],"experts,":[194],"show":[195,254],"that":[196,256],"algorithm:":[198],"(i)":[199],"faster":[201],"than":[202,207],"less":[206],"1s/subject":[208],"versus":[209],"few":[211],"hours)":[212],"(ii)":[213],"reliable,":[215],"error":[218],"0.5":[220],"mm":[221],"\u00b1":[222],"0.06":[223],"(iii)":[226],"accurately":[228,308],"maps":[229],"implants":[231],"their":[233],"anatomical":[234],"regions":[235],"improving":[236],"interpretability":[238],"electrophysiological":[240],"traces":[241],"both":[243],"clinical":[244],"research":[246],"studies.":[247],"Moreover,":[248],"using":[249],"28-subject":[251],"here":[255],"also":[260],"robust":[261],"(error":[262],"<":[263],"0.005":[264],"mm)":[265,271],"against":[266],"deep-brain":[267],"displacements":[268],"(<":[269],"implanted":[274],"shaft":[276],"those":[278],"before":[280],"CONCLUSIONS:":[282],"Our":[283],"method":[284,303],"represents,":[285],"best":[288],"knowledge,":[291],"automatic":[294],"electrodes.":[301],"can":[304],"be":[305],"identify":[309],"neuroanatomical":[311],"loci":[312],"non-expert":[319],"fast":[322],"reliable":[324],"manner.":[325]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":7},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":4}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
