{"id":"https://openalex.org/W2059414555","doi":"https://doi.org/10.1186/s12859-014-0418-7","title":"Fast individual ancestry inference from DNA sequence data leveraging allele frequencies for multiple populations","display_name":"Fast individual ancestry inference from DNA sequence data leveraging allele frequencies for multiple populations","publication_year":2015,"publication_date":"2015-01-15","ids":{"openalex":"https://openalex.org/W2059414555","doi":"https://doi.org/10.1186/s12859-014-0418-7","mag":"2059414555","pmid":"https://pubmed.ncbi.nlm.nih.gov/25592880"},"language":"en","primary_location":{"id":"doi:10.1186/s12859-014-0418-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-014-0418-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-014-0418-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-014-0418-7","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5040822940","display_name":"Vikas Bansal","orcid":"https://orcid.org/0000-0002-6684-5335"},"institutions":[{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]},{"id":"https://openalex.org/I40399489","display_name":"Torrey Pines Institute For Molecular Studies","ror":"https://ror.org/01grq2104","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I40399489"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Vikas Bansal","raw_affiliation_strings":["Department of Pediatrics, University of California San Diego, 9500 Gilman Drive, La Jolla, 92093, CA, USA. vibansal@ucsd.edu","Scripps Translational Science Institute, 3344 N Torrey Pines Court, La Jolla, 92037, CA, USA. vibansal@ucsd.edu"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pediatrics, University of California San Diego, 9500 Gilman Drive, La Jolla, 92093, CA, USA. vibansal@ucsd.edu","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"Scripps Translational Science Institute, 3344 N Torrey Pines Court, La Jolla, 92037, CA, USA. vibansal@ucsd.edu","institution_ids":["https://openalex.org/I123431417","https://openalex.org/I40399489"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5034935863","display_name":"Ondrej Libiger","orcid":null},"institutions":[{"id":"https://openalex.org/I123431417","display_name":"Scripps Research Institute","ror":"https://ror.org/02dxx6824","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I123431417"]},{"id":"https://openalex.org/I40399489","display_name":"Torrey Pines Institute For Molecular Studies","ror":"https://ror.org/01grq2104","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I40399489"]},{"id":"https://openalex.org/I4210086680","display_name":"Revolution Analytics (United States)","ror":"https://ror.org/00y6akb91","country_code":"US","type":"company","lineage":["https://openalex.org/I4210086680"]},{"id":"https://openalex.org/I4210086782","display_name":"Revolution Research","ror":"https://ror.org/000b1qx78","country_code":"US","type":"company","lineage":["https://openalex.org/I4210086782"]},{"id":"https://openalex.org/I4210100604","display_name":"Revolution Medicines (United States)","ror":"https://ror.org/00mny1y94","country_code":"US","type":"company","lineage":["https://openalex.org/I4210100604"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ondrej Libiger","raw_affiliation_strings":["Current address: MD Revolution, San Diego, CA, USA. ondrej@mdrevolution.com","Scripps Translational Science Institute, 3344 N Torrey Pines Court, La Jolla, 92037, CA, USA. ondrej@mdrevolution.com"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Current address: MD Revolution, San Diego, CA, USA. ondrej@mdrevolution.com","institution_ids":["https://openalex.org/I4210086680","https://openalex.org/I4210086782","https://openalex.org/I4210100604"]},{"raw_affiliation_string":"Scripps Translational Science Institute, 3344 N Torrey Pines Court, La Jolla, 92037, CA, USA. ondrej@mdrevolution.com","institution_ids":["https://openalex.org/I123431417","https://openalex.org/I40399489"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5040822940"],"corresponding_institution_ids":["https://openalex.org/I123431417","https://openalex.org/I36258959","https://openalex.org/I40399489"],"apc_list":{"value":2790,"currency":"USD","value_usd":2790},"apc_paid":{"value":2790,"currency":"USD","value_usd":2790},"fwci":2.9194,"has_fulltext":true,"cited_by_count":72,"citation_normalized_percentile":{"value":0.91264238,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"16","issue":"1","first_page":"4","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.8402000069618225,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.8402000069618225,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10751","display_name":"Forensic and Genetic Research","score":0.14219999313354492,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12749","display_name":"Race, Genetics, and Society","score":0.00800000037997961,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/1000-genomes-project","display_name":"1000 Genomes Project","score":0.6374571323394775},{"id":"https://openalex.org/keywords/inference","display_name":"Inference","score":0.595686674118042},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5548171997070312},{"id":"https://openalex.org/keywords/population-stratification","display_name":"Population stratification","score":0.5431643128395081},{"id":"https://openalex.org/keywords/population","display_name":"Population","score":0.5258527398109436},{"id":"https://openalex.org/keywords/exome","display_name":"Exome","score":0.49226751923561096},{"id":"https://openalex.org/keywords/allele-frequency","display_name":"Allele frequency","score":0.4904737174510956},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.4757354259490967},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.47000962495803833},{"id":"https://openalex.org/keywords/dna-sequencing","display_name":"DNA sequencing","score":0.45459607243537903},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.44212648272514343},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4397156238555908},{"id":"https://openalex.org/keywords/pooling","display_name":"Pooling","score":0.4277102053165436},{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.41975319385528564},{"id":"https://openalex.org/keywords/exome-sequencing","display_name":"Exome sequencing","score":0.3577015995979309},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33788979053497314},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.25452113151550293},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.17271938920021057},{"id":"https://openalex.org/keywords/mutation","display_name":"Mutation","score":0.16189640760421753},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11806315183639526}],"concepts":[{"id":"https://openalex.org/C97425143","wikidata":"https://www.wikidata.org/wiki/Q164786","display_name":"1000 Genomes Project","level":5,"score":0.6374571323394775},{"id":"https://openalex.org/C2776214188","wikidata":"https://www.wikidata.org/wiki/Q408386","display_name":"Inference","level":2,"score":0.595686674118042},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5548171997070312},{"id":"https://openalex.org/C166976648","wikidata":"https://www.wikidata.org/wiki/Q7229824","display_name":"Population stratification","level":5,"score":0.5431643128395081},{"id":"https://openalex.org/C2908647359","wikidata":"https://www.wikidata.org/wiki/Q2625603","display_name":"Population","level":2,"score":0.5258527398109436},{"id":"https://openalex.org/C10590036","wikidata":"https://www.wikidata.org/wiki/Q417664","display_name":"Exome","level":5,"score":0.49226751923561096},{"id":"https://openalex.org/C37463918","wikidata":"https://www.wikidata.org/wiki/Q387981","display_name":"Allele frequency","level":4,"score":0.4904737174510956},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.4757354259490967},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.47000962495803833},{"id":"https://openalex.org/C51679486","wikidata":"https://www.wikidata.org/wiki/Q380546","display_name":"DNA sequencing","level":3,"score":0.45459607243537903},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.44212648272514343},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4397156238555908},{"id":"https://openalex.org/C70437156","wikidata":"https://www.wikidata.org/wiki/Q7228652","display_name":"Pooling","level":2,"score":0.4277102053165436},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.41975319385528564},{"id":"https://openalex.org/C16671776","wikidata":"https://www.wikidata.org/wiki/Q5420592","display_name":"Exome sequencing","level":4,"score":0.3577015995979309},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33788979053497314},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.25452113151550293},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.17271938920021057},{"id":"https://openalex.org/C501734568","wikidata":"https://www.wikidata.org/wiki/Q42918","display_name":"Mutation","level":3,"score":0.16189640760421753},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11806315183639526},{"id":"https://openalex.org/C149923435","wikidata":"https://www.wikidata.org/wiki/Q37732","display_name":"Demography","level":1,"score":0.0},{"id":"https://openalex.org/C144024400","wikidata":"https://www.wikidata.org/wiki/Q21201","display_name":"Sociology","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003198","descriptor_name":"Computer Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005787","descriptor_name":"Gene Frequency","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005787","descriptor_name":"Gene Frequency","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005787","descriptor_name":"Gene Frequency","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005828","descriptor_name":"Genetics, Population","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005828","descriptor_name":"Genetics, Population","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005828","descriptor_name":"Genetics, Population","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015810","descriptor_name":"Linkage Disequilibrium","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015810","descriptor_name":"Linkage Disequilibrium","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015810","descriptor_name":"Linkage Disequilibrium","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016013","descriptor_name":"Likelihood Functions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016013","descriptor_name":"Likelihood Functions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016013","descriptor_name":"Likelihood Functions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D044382","descriptor_name":"Population Groups","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D044382","descriptor_name":"Population Groups","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D044382","descriptor_name":"Population Groups","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056726","descriptor_name":"Genetic Association Studies","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056726","descriptor_name":"Genetic Association Studies","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D056726","descriptor_name":"Genetic Association Studies","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D059472","descriptor_name":"Exome","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D060148","descriptor_name":"HapMap Project","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060148","descriptor_name":"HapMap Project","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D060148","descriptor_name":"HapMap Project","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1186/s12859-014-0418-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-014-0418-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-014-0418-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},{"id":"pmid:25592880","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25592880","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:3282356","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4301802","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:ark:/13030/qt7g59k8fp","is_oa":false,"landing_page_url":null,"pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:escholarship.org/ark:/13030/qt7g59k8fp","is_oa":false,"landing_page_url":"https://escholarship.org/uc/item/7g59k8fp","pdf_url":null,"source":{"id":"https://openalex.org/S4306400115","display_name":"eScholarship (California Digital Library)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I2801248553","host_organization_name":"California Digital Library","host_organization_lineage":["https://openalex.org/I2801248553"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"BMC bioinformatics, vol 16, iss 1","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1186/s12859-014-0418-7","is_oa":true,"landing_page_url":"https://doi.org/10.1186/s12859-014-0418-7","pdf_url":"https://bmcbioinformatics.biomedcentral.com/counter/pdf/10.1186/s12859-014-0418-7","source":{"id":"https://openalex.org/S19032547","display_name":"BMC Bioinformatics","issn_l":"1471-2105","issn":["1471-2105"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"BMC Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4049938623","display_name":null,"funder_award_id":"1R21HG007430","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G8687908146","display_name":null,"funder_award_id":"R21 HG007430","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2059414555.pdf","grobid_xml":"https://content.openalex.org/works/W2059414555.grobid-xml"},"referenced_works_count":48,"referenced_works":["https://openalex.org/W1968769070","https://openalex.org/W1981638214","https://openalex.org/W1986265706","https://openalex.org/W1991301405","https://openalex.org/W2000359198","https://openalex.org/W2001587667","https://openalex.org/W2005126631","https://openalex.org/W2009588715","https://openalex.org/W2015759847","https://openalex.org/W2020040634","https://openalex.org/W2023496421","https://openalex.org/W2030701454","https://openalex.org/W2060123227","https://openalex.org/W2064902628","https://openalex.org/W2067983286","https://openalex.org/W2082043949","https://openalex.org/W2084347413","https://openalex.org/W2095848015","https://openalex.org/W2096303238","https://openalex.org/W2096791516","https://openalex.org/W2097804771","https://openalex.org/W2097988074","https://openalex.org/W2098126593","https://openalex.org/W2102714321","https://openalex.org/W2104797721","https://openalex.org/W2107916366","https://openalex.org/W2108169091","https://openalex.org/W2108234281","https://openalex.org/W2112113834","https://openalex.org/W2119444539","https://openalex.org/W2120483845","https://openalex.org/W2124957657","https://openalex.org/W2124960286","https://openalex.org/W2126105762","https://openalex.org/W2128371599","https://openalex.org/W2130062599","https://openalex.org/W2139265150","https://openalex.org/W2141042406","https://openalex.org/W2142777374","https://openalex.org/W2145491782","https://openalex.org/W2150536115","https://openalex.org/W2161633633","https://openalex.org/W2165947843","https://openalex.org/W2178221445","https://openalex.org/W3029645440","https://openalex.org/W3136389637","https://openalex.org/W4233492691","https://openalex.org/W4293775970"],"related_works":["https://openalex.org/W150504465","https://openalex.org/W1993720104","https://openalex.org/W2302778906","https://openalex.org/W2970357378","https://openalex.org/W2922059869","https://openalex.org/W1973903249","https://openalex.org/W2735404674","https://openalex.org/W2943009138","https://openalex.org/W3100743957","https://openalex.org/W3133031157"],"abstract_inverted_index":{"BACKGROUND:":[0],"Estimation":[1],"of":[2,13,68,98,138,170],"individual":[3,87,127],"ancestry":[4,33,174,236],"from":[5,82,130,161,237,244],"genetic":[6,75],"data":[7,91,118,129,160,183,205,240],"is":[8,148,228,242],"useful":[9],"for":[10,32,63,110,175,211,213,234],"the":[11,65,83,99,104,111,139,162,171],"analysis":[12],"disease":[14],"association":[15,219],"studies,":[16],"understanding":[17],"human":[18,47],"population":[19,214],"history":[20],"and":[21,49,86,123,136,155,184,231,241],"interpreting":[22],"personal":[23],"genomic":[24],"variation.":[25],"New,":[26],"computationally":[27],"efficient":[28,230],"methods":[29,154],"are":[30,178],"needed":[31],"inference":[34],"that":[35,145,168,192,221],"can":[36,50,195],"effectively":[37],"utilize":[38,222],"existing":[39],"information":[40],"about":[41],"allele":[42,80],"frequencies":[43,81],"associated":[44],"with":[45,53],"different":[46],"populations":[48,71,85],"work":[51],"directly":[52],"DNA":[54,223,238],"sequence":[55,90,117,182,187,204,239],"reads.":[56],"RESULTS:":[57],"We":[58],"describe":[59],"a":[60,94,208],"fast":[61],"method":[62,78,140,147,194,227],"estimating":[64,235],"relative":[66],"contribution":[67],"known":[69],"reference":[70,84,132],"to":[72,92,141,198],"an":[73,229],"individual's":[74],"ancestry.":[76],"Our":[77,226],"utilizes":[79],"genotype":[88,121,128],"or":[89],"obtain":[93],"maximum":[95],"likelihood":[96],"estimate":[97,199],"global":[100],"admixture":[101,200],"proportions":[102,201],"using":[103,120,202],"BFGS":[105],"optimization":[106],"algorithm.":[107],"It":[108],"accounts":[109],"uncertainty":[112],"in":[113,116,216],"genotypes":[114],"present":[115],"by":[119],"likelihoods":[122],"does":[124],"not":[125],"require":[126],"external":[131],"panels.":[133],"Simulation":[134],"studies":[135,220],"application":[137],"real":[142],"datasets":[143],"demonstrate":[144,191],"our":[146,193],"significantly":[149],"times":[150],"faster":[151],"than":[152],"previous":[153],"has":[156],"comparable":[157],"accuracy.":[158],"Using":[159],"1000":[163],"Genomes":[164],"project,":[165],"we":[166,190],"show":[167],"estimates":[169],"genome-wide":[172],"average":[173],"admixed":[176],"individuals":[177],"consistent":[179],"between":[180],"exome":[181],"whole-genome":[185],"low-coverage":[186],"data.":[188],"Finally,":[189],"be":[196],"used":[197],"pooled":[203],"making":[206],"it":[207],"valuable":[209],"tool":[210,233],"controlling":[212],"stratification":[215],"sequencing":[217],"based":[218],"pooling.":[224],"CONCLUSIONS:":[225],"versatile":[232],"available":[243],"https://sites.google.com/site/vibansal/software/iAdmix":[245],".":[246]},"counts_by_year":[{"year":2026,"cited_by_count":3},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":9},{"year":2023,"cited_by_count":12},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":11},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":1}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
