{"id":"https://openalex.org/W2120888506","doi":"https://doi.org/10.1186/2047-2501-3-s1-s3","title":"High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies","display_name":"High performance computing enabling exhaustive analysis of higher order single nucleotide polymorphism interaction in Genome Wide Association Studies","publication_year":2015,"publication_date":"2015-02-24","ids":{"openalex":"https://openalex.org/W2120888506","doi":"https://doi.org/10.1186/2047-2501-3-s1-s3","mag":"2120888506","pmid":"https://pubmed.ncbi.nlm.nih.gov/25870758"},"language":"en","primary_location":{"id":"doi:10.1186/2047-2501-3-s1-s3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2047-2501-3-s1-s3","pdf_url":"https://link.springer.com/content/pdf/10.1186%2F2047-2501-3-S1-S3.pdf","source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://link.springer.com/content/pdf/10.1186%2F2047-2501-3-S1-S3.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5086912690","display_name":"Benjamin Goudey","orcid":"https://orcid.org/0000-0002-2318-985X"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I4210120068","display_name":"IBM Research - Australia","ror":"https://ror.org/027r3nx49","country_code":"AU","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115","https://openalex.org/I4210120068"]}],"countries":["AU"],"is_corresponding":true,"raw_author_name":"Benjamin Goudey","raw_affiliation_strings":["IBM Research - Australia, 204 Lygon Street, Carlton, VIC, 3053, Australia ; Department of Computing and Information Systems, University of Melbourne, Parkville, VIC, 3010, Australia","Department of Computing and Information Systems, University of Melbourne, Parkville, Australia","IBM Research - Australia, Carlton, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IBM Research - Australia, 204 Lygon Street, Carlton, VIC, 3053, Australia ; Department of Computing and Information Systems, University of Melbourne, Parkville, VIC, 3010, Australia","institution_ids":["https://openalex.org/I4210120068"]},{"raw_affiliation_string":"Department of Computing and Information Systems, University of Melbourne, Parkville, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"IBM Research - Australia, Carlton, Australia","institution_ids":["https://openalex.org/I4210120068"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110142512","display_name":"Mani Abedini","orcid":null},"institutions":[{"id":"https://openalex.org/I1341412227","display_name":"IBM (United States)","ror":"https://ror.org/05hh8d621","country_code":"US","type":"company","lineage":["https://openalex.org/I1341412227"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mani Abedini","raw_affiliation_strings":["IBM Research - Australia, 204 Lygon Street, Carlton, VIC, 3053, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IBM Research - Australia, 204 Lygon Street, Carlton, VIC, 3053, Australia","institution_ids":["https://openalex.org/I1341412227"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023667273","display_name":"John L. Hopper","orcid":"https://orcid.org/0000-0002-8567-173X"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"John L Hopper","raw_affiliation_strings":["Melbourne School of Population and Global Health, University of Melbourne, Parkville, VIC, 3010, Australia","Melbourne School of Population and Global Health, University of Melbourne, Parkville, VIC 3010, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Melbourne School of Population and Global Health, University of Melbourne, Parkville, VIC, 3010, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"Melbourne School of Population and Global Health, University of Melbourne, Parkville, VIC 3010, Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056977453","display_name":"Michael Inouye","orcid":"https://orcid.org/0000-0001-9413-6520"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Michael Inouye","raw_affiliation_strings":["Department of Pathology and Department Microbiology and Immunology, University of Melbourne, Parkville, VIC, 3010, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathology and Department Microbiology and Immunology, University of Melbourne, Parkville, VIC, 3010, Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023193568","display_name":"Enes Makalic","orcid":"https://orcid.org/0000-0003-3017-0871"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Enes Makalic","raw_affiliation_strings":["Melbourne School of Population and Global Health, University of Melbourne, Parkville, VIC, 3010, Australia","Melbourne School of Population and Global Health, University of Melbourne  Parkville Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Melbourne School of Population and Global Health, University of Melbourne, Parkville, VIC, 3010, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"Melbourne School of Population and Global Health, University of Melbourne  Parkville Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046316602","display_name":"Daniel F. Schmidt","orcid":"https://orcid.org/0000-0002-1788-2375"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Daniel F Schmidt","raw_affiliation_strings":["Melbourne School of Population and Global Health, University of Melbourne, Parkville, VIC, 3010, Australia","Melbourne School of Population and Global Health, University of Melbourne  Parkville Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Melbourne School of Population and Global Health, University of Melbourne, Parkville, VIC, 3010, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"Melbourne School of Population and Global Health, University of Melbourne  Parkville Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5106447615","display_name":"John Wagner","orcid":null},"institutions":[{"id":"https://openalex.org/I4210120068","display_name":"IBM Research - Australia","ror":"https://ror.org/027r3nx49","country_code":"AU","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115","https://openalex.org/I4210120068"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"John Wagner","raw_affiliation_strings":["IBM Research Collaboratory for Life Sciences-Melbourne, 187 Grattan Street, Carlton, VIC 3010, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IBM Research Collaboratory for Life Sciences-Melbourne, 187 Grattan Street, Carlton, VIC 3010, Australia","institution_ids":["https://openalex.org/I4210120068"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101777562","display_name":"Zeyu Zhou","orcid":"https://orcid.org/0009-0001-5493-9019"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I4210120068","display_name":"IBM Research - Australia","ror":"https://ror.org/027r3nx49","country_code":"AU","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115","https://openalex.org/I4210120068"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Zeyu Zhou","raw_affiliation_strings":["IBM Research - Australia, 204 Lygon Street, Carlton, VIC, 3053, Australia ; Department of Mathematics and Statistics, University of Melbourne, Parkville, VIC, 3010, Australia","Department of Mathematics and Statistics, University of Melbourne, Parkville, Australia","IBM Research - Australia, Carlton, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IBM Research - Australia, 204 Lygon Street, Carlton, VIC, 3053, Australia ; Department of Mathematics and Statistics, University of Melbourne, Parkville, VIC, 3010, Australia","institution_ids":["https://openalex.org/I4210120068"]},{"raw_affiliation_string":"Department of Mathematics and Statistics, University of Melbourne, Parkville, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"IBM Research - Australia, Carlton, Australia","institution_ids":["https://openalex.org/I4210120068"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041495909","display_name":"Justin Zobel","orcid":"https://orcid.org/0000-0001-6622-032X"},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Justin Zobel","raw_affiliation_strings":["Department of Computing and Information Systems, University of Melbourne, Parkville, VIC, 3010, Australia","Department of Computing and Information Systems University of Melbourne Parkville VIC 3010 Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing and Information Systems, University of Melbourne, Parkville, VIC, 3010, Australia","institution_ids":["https://openalex.org/I165779595"]},{"raw_affiliation_string":"Department of Computing and Information Systems University of Melbourne Parkville VIC 3010 Australia","institution_ids":["https://openalex.org/I165779595"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5065673705","display_name":"Matthias Reumann","orcid":null},"institutions":[{"id":"https://openalex.org/I165779595","display_name":"The University of Melbourne","ror":"https://ror.org/01ej9dk98","country_code":"AU","type":"education","lineage":["https://openalex.org/I165779595"]},{"id":"https://openalex.org/I4210120068","display_name":"IBM Research - Australia","ror":"https://ror.org/027r3nx49","country_code":"AU","type":"facility","lineage":["https://openalex.org/I1341412227","https://openalex.org/I4210114115","https://openalex.org/I4210120068"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Matthias Reumann","raw_affiliation_strings":["IBM Research - Australia, 204 Lygon Street, Carlton, VIC, 3053, Australia ; Department of Computing and Information Systems, University of Melbourne, Parkville, VIC, 3010, Australia","IBM Research - Australia, Carlton, Australia","Department of Computing and Information Systems, University of Melbourne, Parkville, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"IBM Research - Australia, 204 Lygon Street, Carlton, VIC, 3053, Australia ; Department of Computing and Information Systems, University of Melbourne, Parkville, VIC, 3010, Australia","institution_ids":["https://openalex.org/I4210120068"]},{"raw_affiliation_string":"IBM Research - Australia, Carlton, Australia","institution_ids":["https://openalex.org/I4210120068"]},{"raw_affiliation_string":"Department of Computing and Information Systems, University of Melbourne, Parkville, Australia","institution_ids":["https://openalex.org/I165779595"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5086912690"],"corresponding_institution_ids":["https://openalex.org/I165779595","https://openalex.org/I4210120068"],"apc_list":{"value":3590,"currency":"USD","value_usd":3590},"apc_paid":{"value":3590,"currency":"USD","value_usd":3590},"fwci":3.1508,"has_fulltext":true,"cited_by_count":31,"citation_normalized_percentile":{"value":0.92098243,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"3","issue":"S1","first_page":"S3","last_page":"S3"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.989799976348877,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9855999946594238,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/genome-wide-association-study","display_name":"Genome-wide association study","score":0.7174830436706543},{"id":"https://openalex.org/keywords/univariate","display_name":"Univariate","score":0.712509274482727},{"id":"https://openalex.org/keywords/supercomputer","display_name":"Supercomputer","score":0.6686276197433472},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.6383332014083862},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.5828282237052917},{"id":"https://openalex.org/keywords/ibm","display_name":"IBM","score":0.5375452041625977},{"id":"https://openalex.org/keywords/multivariate-statistics","display_name":"Multivariate statistics","score":0.5334845781326294},{"id":"https://openalex.org/keywords/multivariate-analysis","display_name":"Multivariate analysis","score":0.5080873966217041},{"id":"https://openalex.org/keywords/snp-array","display_name":"SNP array","score":0.45461782813072205},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41040340065956116},{"id":"https://openalex.org/keywords/parallel-computing","display_name":"Parallel computing","score":0.27325403690338135},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.23795756697654724},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20773863792419434},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.14306464791297913},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.08039933443069458}],"concepts":[{"id":"https://openalex.org/C106208931","wikidata":"https://www.wikidata.org/wiki/Q1098876","display_name":"Genome-wide association study","level":5,"score":0.7174830436706543},{"id":"https://openalex.org/C199163554","wikidata":"https://www.wikidata.org/wiki/Q1681619","display_name":"Univariate","level":3,"score":0.712509274482727},{"id":"https://openalex.org/C83283714","wikidata":"https://www.wikidata.org/wiki/Q121117","display_name":"Supercomputer","level":2,"score":0.6686276197433472},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.6383332014083862},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.5828282237052917},{"id":"https://openalex.org/C70388272","wikidata":"https://www.wikidata.org/wiki/Q5968558","display_name":"IBM","level":2,"score":0.5375452041625977},{"id":"https://openalex.org/C161584116","wikidata":"https://www.wikidata.org/wiki/Q1952580","display_name":"Multivariate statistics","level":2,"score":0.5334845781326294},{"id":"https://openalex.org/C38180746","wikidata":"https://www.wikidata.org/wiki/Q1952580","display_name":"Multivariate analysis","level":2,"score":0.5080873966217041},{"id":"https://openalex.org/C122060243","wikidata":"https://www.wikidata.org/wiki/Q7391885","display_name":"SNP array","level":5,"score":0.45461782813072205},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41040340065956116},{"id":"https://openalex.org/C173608175","wikidata":"https://www.wikidata.org/wiki/Q232661","display_name":"Parallel computing","level":1,"score":0.27325403690338135},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.23795756697654724},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20773863792419434},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.14306464791297913},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.08039933443069458},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0},{"id":"https://openalex.org/C171250308","wikidata":"https://www.wikidata.org/wiki/Q11468","display_name":"Nanotechnology","level":1,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1186/2047-2501-3-s1-s3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2047-2501-3-s1-s3","pdf_url":"https://link.springer.com/content/pdf/10.1186%2F2047-2501-3-S1-S3.pdf","source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},{"id":"pmid:25870758","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25870758","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health information science and systems","raw_type":null},{"id":"pmh:oai:jupiter.its.unimelb.edu.au:11343/91082","is_oa":true,"landing_page_url":"http://hdl.handle.net/11343/91082","pdf_url":"http://hdl.handle.net/11343/91082","source":{"id":"https://openalex.org/S4377196259","display_name":"Minerva Access (University of Melbourne)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I165779595","host_organization_name":"The University of Melbourne","host_organization_lineage":["https://openalex.org/I165779595"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:4383059","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4383059","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Health Inf Sci Syst","raw_type":"Text"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/279879","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/279879","pdf_url":null,"source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"doi:10.17863/cam.27247","is_oa":true,"landing_page_url":"https://doi.org/10.17863/cam.27247","pdf_url":null,"source":{"id":"https://openalex.org/S7407050737","display_name":"Apollo","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"JournalArticle"}],"best_oa_location":{"id":"doi:10.1186/2047-2501-3-s1-s3","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2047-2501-3-s1-s3","pdf_url":"https://link.springer.com/content/pdf/10.1186%2F2047-2501-3-S1-S3.pdf","source":{"id":"https://openalex.org/S4210178793","display_name":"Health Information Science and Systems","issn_l":"2047-2501","issn":["2047-2501"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310319965","host_organization_name":"Springer Nature","host_organization_lineage":["https://openalex.org/P4310319965"],"host_organization_lineage_names":["Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Health Information Science and Systems","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.49000000953674316,"id":"https://metadata.un.org/sdg/12","display_name":"Responsible consumption and production"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2120888506.pdf","grobid_xml":"https://content.openalex.org/works/W2120888506.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W1493790738","https://openalex.org/W1562526954","https://openalex.org/W1591552413","https://openalex.org/W1598808289","https://openalex.org/W1762731526","https://openalex.org/W1822695366","https://openalex.org/W1966315117","https://openalex.org/W2019559291","https://openalex.org/W2030753360","https://openalex.org/W2051616601","https://openalex.org/W2054050000","https://openalex.org/W2058401000","https://openalex.org/W2081484203","https://openalex.org/W2102381029","https://openalex.org/W2106040044","https://openalex.org/W2108352360","https://openalex.org/W2110808585","https://openalex.org/W2112966225","https://openalex.org/W2117138514","https://openalex.org/W2140249224","https://openalex.org/W2149723686","https://openalex.org/W2152579567","https://openalex.org/W2153512220","https://openalex.org/W2156064982","https://openalex.org/W2158307981","https://openalex.org/W2163924952","https://openalex.org/W2171777347","https://openalex.org/W2295862081","https://openalex.org/W2398736067","https://openalex.org/W2885727518","https://openalex.org/W4235019056","https://openalex.org/W4250162294"],"related_works":["https://openalex.org/W3126131865","https://openalex.org/W2384867379","https://openalex.org/W3214280620","https://openalex.org/W2329539859","https://openalex.org/W3191490922","https://openalex.org/W1828158523","https://openalex.org/W2765823764","https://openalex.org/W2227905990","https://openalex.org/W2047547195","https://openalex.org/W2251285835"],"abstract_inverted_index":{"Genome-wide":[0],"association":[1],"studies":[2,207],"(GWAS)":[3],"are":[4,17],"a":[5,20,59,71],"common":[6],"approach":[7],"for":[8,108,120],"systematic":[9],"discovery":[10],"of":[11,103,130,140,203],"single":[12],"nucleotide":[13],"polymorphisms":[14],"(SNPs)":[15],"which":[16],"associated":[18],"with":[19],"given":[21],"disease.":[22],"Univariate":[23],"analysis":[24,38,45,74,135,141,149,202],"approaches":[25],"commonly":[26],"employed":[27],"may":[28,136],"miss":[29],"important":[30],"SNP":[31,44,78],"associations":[32],"that":[33,62,142,180],"only":[34],"appear":[35],"through":[36],"multivariate":[37,43],"in":[39,127,184],"complex":[40],"diseases.":[41],"However,":[42],"is":[46,101,173,195],"currently":[47,157],"limited":[48],"by":[49],"its":[50],"inherent":[51],"computational":[52,60],"complexity.":[53],"In":[54],"this":[55,185,191],"work,":[56],"we":[57,69],"present":[58],"framework":[61],"harnesses":[63],"supercomputers.":[64],"Based":[65],"on":[66,75,85,155,208],"our":[67,176],"results,":[68],"estimate":[70],"three-way":[72],"interaction":[73,134,206],"1.1":[76],"million":[77],"GWAS":[79],"data":[80],"requiring":[81],"over":[82],"5.8":[83],"years":[84],"the":[86,94,125,128,138,147,156,165,181],"full":[87],"\"Avoca\"":[88],"IBM":[89,159],"Blue":[90,160],"Gene/Q":[91,161],"installation":[92],"at":[93,164],"Victorian":[95],"Life":[96],"Sciences":[97],"Computation":[98],"Initiative.":[99],"This":[100],"hundreds":[102],"times":[104,115],"faster":[105,116],"than":[106,117],"estimates":[107],"other":[109],"CPU":[110],"based":[111],"methods":[112],"and":[113],"four":[114],"runtimes":[118],"estimated":[119],"GPU":[121],"methods,":[122],"indicating":[123],"how":[124],"improvement":[126],"level":[129],"hardware":[131],"applied":[132],"to":[133,198],"alter":[137],"types":[139],"can":[143,187],"be":[144,188],"performed.":[145],"Furthermore,":[146],"same":[148],"would":[150],"take":[151],"under":[152],"3":[153],"months":[154],"largest":[158],"supercomputer":[162],"\"Sequoia\"":[163],"Lawrence":[166],"Livermore":[167],"National":[168],"Laboratory":[169],"assuming":[170],"linear":[171],"scaling":[172],"maintained":[174],"as":[175],"results":[177],"suggest.":[178],"Given":[179],"implementation":[182],"used":[183],"study":[186],"further":[189],"optimised,":[190],"runtime":[192],"means":[193],"it":[194],"becoming":[196],"feasible":[197],"carry":[199],"out":[200],"exhaustive":[201],"higher":[204],"order":[205],"large":[209],"modern":[210],"GWAS.":[211]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2}],"updated_date":"2026-07-25T09:21:30.201066","created_date":"2025-10-10T00:00:00"}
