{"id":"https://openalex.org/W2158682697","doi":"https://doi.org/10.1186/2043-9113-4-4","title":"A novel molecular typing method of Mycobacteria based on DNA barcoding visualization","display_name":"A novel molecular typing method of Mycobacteria based on DNA barcoding visualization","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W2158682697","doi":"https://doi.org/10.1186/2043-9113-4-4","mag":"2158682697","pmid":"https://pubmed.ncbi.nlm.nih.gov/24555538"},"language":"en","primary_location":{"id":"doi:10.1186/2043-9113-4-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2043-9113-4-4","pdf_url":"https://jclinbioinformatics.biomedcentral.com/track/pdf/10.1186/2043-9113-4-4","source":{"id":"https://openalex.org/S141199735","display_name":"Journal of Clinical Bioinformatics","issn_l":"2043-9113","issn":["2043-9113"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Clinical Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://jclinbioinformatics.biomedcentral.com/track/pdf/10.1186/2043-9113-4-4","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100395506","display_name":"Bin Liu","orcid":"https://orcid.org/0000-0002-5583-7380"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210125137","display_name":"First Hospital of Jilin University","ror":"https://ror.org/034haf133","country_code":"CN","type":"healthcare","lineage":["https://openalex.org/I4210125137"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Bin Liu","raw_affiliation_strings":["Cardiovascular disease center, First Hospital of Jilin University, Changchun, Jilin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cardiovascular disease center, First Hospital of Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210125137"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100390593","display_name":"Xiaotian Zhang","orcid":"https://orcid.org/0000-0002-2773-6638"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210136497","display_name":"Jilin Medical University","ror":"https://ror.org/03mzw7781","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210136497"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Xiaotian Zhang","raw_affiliation_strings":["Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210136497"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102487396","display_name":"Honglan Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210136497","display_name":"Jilin Medical University","ror":"https://ror.org/03mzw7781","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210136497"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Honglan Huang","raw_affiliation_strings":["Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210136497"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100386074","display_name":"Ying Zhang","orcid":"https://orcid.org/0000-0002-0254-4461"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210136497","display_name":"Jilin Medical University","ror":"https://ror.org/03mzw7781","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210136497"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ying Zhang","raw_affiliation_strings":["Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210136497"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058786170","display_name":"Fengfeng Zhou","orcid":"https://orcid.org/0000-0002-8108-6007"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210136497","display_name":"Jilin Medical University","ror":"https://ror.org/03mzw7781","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210136497"]},{"id":"https://openalex.org/I4210145761","display_name":"Shenzhen Institutes of Advanced Technology","ror":"https://ror.org/04gh4er46","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210145761"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Fengfeng Zhou","raw_affiliation_strings":["Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China. fengfengzhou@gmail.com","Shenzhen Institutes of Advanced Technology, and The Key Laboratory for Health Informatics, Chinese Academy of Sciences, Shenzhen, Guangdong, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China. fengfengzhou@gmail.com","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210136497"]},{"raw_affiliation_string":"Shenzhen Institutes of Advanced Technology, and The Key Laboratory for Health Informatics, Chinese Academy of Sciences, Shenzhen, Guangdong, China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210145761"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100334012","display_name":"Guoqing Wang","orcid":"https://orcid.org/0000-0001-9326-3755"},"institutions":[{"id":"https://openalex.org/I194450716","display_name":"Jilin University","ror":"https://ror.org/00js3aw79","country_code":"CN","type":"education","lineage":["https://openalex.org/I194450716"]},{"id":"https://openalex.org/I4210136497","display_name":"Jilin Medical University","ror":"https://ror.org/03mzw7781","country_code":"CN","type":"education","lineage":["https://openalex.org/I4210136497"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Guoqing Wang","raw_affiliation_strings":["Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pathogenobiology, Basic Medical College of Jilin University, Changchun, Jilin, China","institution_ids":["https://openalex.org/I194450716","https://openalex.org/I4210136497"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5058786170"],"corresponding_institution_ids":["https://openalex.org/I194450716","https://openalex.org/I19820366","https://openalex.org/I4210136497","https://openalex.org/I4210145761"],"apc_list":null,"apc_paid":null,"fwci":0.2033,"has_fulltext":true,"cited_by_count":4,"citation_normalized_percentile":{"value":0.59327963,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":94},"biblio":{"volume":"4","issue":"1","first_page":"4","last_page":"4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T11316","display_name":"Mycobacterium research and diagnosis","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10038","display_name":"Tuberculosis Research and Epidemiology","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/2725","display_name":"Infectious Diseases"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9898999929428101,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/typing","display_name":"Typing","score":0.7618454098701477},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6120952367782593},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5943100452423096},{"id":"https://openalex.org/keywords/mycobacterium","display_name":"Mycobacterium","score":0.5685765147209167},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.55926114320755},{"id":"https://openalex.org/keywords/mycobacterium-tuberculosis","display_name":"Mycobacterium tuberculosis","score":0.4937663972377777},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4921521544456482},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.40787893533706665},{"id":"https://openalex.org/keywords/microbiology","display_name":"Microbiology","score":0.406019926071167},{"id":"https://openalex.org/keywords/tuberculosis","display_name":"Tuberculosis","score":0.2916061282157898},{"id":"https://openalex.org/keywords/bacteria","display_name":"Bacteria","score":0.28638848662376404},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.20663204789161682},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.0978582501411438}],"concepts":[{"id":"https://openalex.org/C2781209916","wikidata":"https://www.wikidata.org/wiki/Q3215756","display_name":"Typing","level":2,"score":0.7618454098701477},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6120952367782593},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5943100452423096},{"id":"https://openalex.org/C2780374374","wikidata":"https://www.wikidata.org/wiki/Q194309","display_name":"Mycobacterium","level":3,"score":0.5685765147209167},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.55926114320755},{"id":"https://openalex.org/C2777975735","wikidata":"https://www.wikidata.org/wiki/Q130971","display_name":"Mycobacterium tuberculosis","level":3,"score":0.4937663972377777},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4921521544456482},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.40787893533706665},{"id":"https://openalex.org/C89423630","wikidata":"https://www.wikidata.org/wiki/Q7193","display_name":"Microbiology","level":1,"score":0.406019926071167},{"id":"https://openalex.org/C2781069245","wikidata":"https://www.wikidata.org/wiki/Q12204","display_name":"Tuberculosis","level":2,"score":0.2916061282157898},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.28638848662376404},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.20663204789161682},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0978582501411438}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/2043-9113-4-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2043-9113-4-4","pdf_url":"https://jclinbioinformatics.biomedcentral.com/track/pdf/10.1186/2043-9113-4-4","source":{"id":"https://openalex.org/S141199735","display_name":"Journal of Clinical Bioinformatics","issn_l":"2043-9113","issn":["2043-9113"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Clinical Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24555538","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24555538","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of clinical bioinformatics","raw_type":null},{"id":"pmh:oai:europepmc.org:2928172","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3931916","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/2043-9113-4-4","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2043-9113-4-4","pdf_url":"https://jclinbioinformatics.biomedcentral.com/track/pdf/10.1186/2043-9113-4-4","source":{"id":"https://openalex.org/S141199735","display_name":"Journal of Clinical Bioinformatics","issn_l":"2043-9113","issn":["2043-9113"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Clinical Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/3","score":0.8500000238418579,"display_name":"Good health and well-being"}],"awards":[{"id":"https://openalex.org/G7923204227","display_name":null,"funder_award_id":"2012T50285","funder_id":"https://openalex.org/F4320321543","funder_display_name":"China Postdoctoral Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"},{"id":"https://openalex.org/F4320321543","display_name":"China Postdoctoral Science Foundation","ror":"https://ror.org/0426zh255"},{"id":"https://openalex.org/F4320322174","display_name":"People's Government of Jilin Province","ror":"https://ror.org/02fzqav45"},{"id":"https://openalex.org/F4320322300","display_name":"Jilin University","ror":"https://ror.org/00js3aw79"},{"id":"https://openalex.org/F4320336024","display_name":"Specialized Research Fund for the Doctoral Program of Higher Education of China","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2158682697.pdf","grobid_xml":"https://content.openalex.org/works/W2158682697.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W1990967520","https://openalex.org/W2005220870","https://openalex.org/W2005360702","https://openalex.org/W2043149452","https://openalex.org/W2052098002","https://openalex.org/W2054385769","https://openalex.org/W2054972296","https://openalex.org/W2073450047","https://openalex.org/W2083889567","https://openalex.org/W2095357998","https://openalex.org/W2097504226","https://openalex.org/W2105399633","https://openalex.org/W2106651224","https://openalex.org/W2107983177","https://openalex.org/W2122402674","https://openalex.org/W2129267752","https://openalex.org/W2136970285","https://openalex.org/W2149231000","https://openalex.org/W2151636105","https://openalex.org/W2154192675","https://openalex.org/W2160204123","https://openalex.org/W2168437058","https://openalex.org/W2172199832","https://openalex.org/W2315368983","https://openalex.org/W2321229447"],"related_works":["https://openalex.org/W3176169626","https://openalex.org/W1606200072","https://openalex.org/W2013429256","https://openalex.org/W1981020211","https://openalex.org/W2094282382","https://openalex.org/W1733763401","https://openalex.org/W2054957329","https://openalex.org/W2392278392","https://openalex.org/W2522808041","https://openalex.org/W2379843844"],"abstract_inverted_index":{"Different":[0],"subtypes":[1,30],"of":[2,14,28,35,52,74,100,113],"Mycobacterium":[3],"tuberculosis":[4],"(MTB)":[5],"may":[6,124],"induce":[7],"diverse":[8],"severe":[9],"human":[10],"infections,":[11],"and":[12,38,68,88,106],"some":[13],"their":[15],"symptoms":[16],"are":[17],"similar":[18],"to":[19,79,128],"other":[20,130],"pathogenes,":[21],"e.g.":[22],"Nontuberculosis":[23],"mycobacteria":[24,54],"(NTM).":[25],"So":[26],"determination":[27],"mycobacterium":[29,64],"facilitates":[31],"the":[32,58,71,82,98,101,107,129],"effective":[33],"control":[34],"MTB":[36,90],"infection":[37],"proliferation.":[39],"This":[40],"study":[41,123],"exploits":[42],"a":[43,115],"novel":[44],"DNA":[45],"barcoding":[46],"visualization":[47],"method":[48,93],"for":[49],"molecular":[50],"typing":[51,92,118],"17":[53],"genomes":[55],"published":[56],"in":[57,121],"NCBI":[59],"prokaryotic":[60],"genome":[61],"database.":[62],"Three":[63],"genes":[65,105],"(Rv0279c,":[66],"Rv3508":[67],"Rv3514)":[69],"from":[70],"PE/PPE":[72],"family":[73],"MT":[75],"Band":[76],"were":[77],"detected":[78],"best":[80],"represent":[81],"inter-strain":[83],"pathogenetic":[84],"variations.":[85],"An":[86],"accurate":[87],"fast":[89],"substrain":[91,117],"was":[94],"proposed":[95],"based":[96],"on":[97],"combination":[99],"aforementioned":[102],"three":[103],"biomarker":[104],"16S":[108],"rRNA":[109],"gene.":[110],"The":[111],"protocol":[112],"establishing":[114],"bacterial":[116],"system":[119],"used":[120],"this":[122],"also":[125],"be":[126],"applied":[127],"pathogenes.":[131]},"counts_by_year":[{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
