{"id":"https://openalex.org/W2168493636","doi":"https://doi.org/10.1186/2043-9113-3-20","title":"A systematic analysis of a mi-RNA inter-pathway regulatory motif","display_name":"A systematic analysis of a mi-RNA inter-pathway regulatory motif","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2168493636","doi":"https://doi.org/10.1186/2043-9113-3-20","mag":"2168493636","pmid":"https://pubmed.ncbi.nlm.nih.gov/24152805"},"language":"en","primary_location":{"id":"doi:10.1186/2043-9113-3-20","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2043-9113-3-20","pdf_url":"https://jclinbioinformatics.biomedcentral.com/track/pdf/10.1186/2043-9113-3-20","source":{"id":"https://openalex.org/S141199735","display_name":"Journal of Clinical Bioinformatics","issn_l":"2043-9113","issn":["2043-9113"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Clinical Bioinformatics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","pubmed"],"open_access":{"is_oa":true,"oa_status":"hybrid","oa_url":"https://jclinbioinformatics.biomedcentral.com/track/pdf/10.1186/2043-9113-3-20","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5026593274","display_name":"Stefano Di Carlo","orcid":"https://orcid.org/0000-0002-7512-5356"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Stefano Di Carlo","raw_affiliation_strings":["Department of Control and Computer Engineering, Politecnico di Torino, Torino, IT, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Control and Computer Engineering, Politecnico di Torino, Torino, IT, Italy","institution_ids":["https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078555784","display_name":"Gianfranco Politano","orcid":"https://orcid.org/0000-0001-5268-9899"},"institutions":[{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Gianfranco Politano","raw_affiliation_strings":["Department of Control and Computer Engineering, Politecnico di Torino, Torino, IT, Italy"],"affiliations":[{"raw_affiliation_string":"Department of Control and Computer Engineering, Politecnico di Torino, Torino, IT, Italy","institution_ids":["https://openalex.org/I177477856"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065582630","display_name":"Alessandro Savino","orcid":"https://orcid.org/0000-0003-0529-7950"},"institutions":[{"id":"https://openalex.org/I4210152452","display_name":"Consorzio Interuniversitario Nazionale per l'Informatica","ror":"https://ror.org/03v8v5y65","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152452"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alessandro Savino","raw_affiliation_strings":["Consorzio Interuniversitario Nazionale per l'Informatica, Verres (AO), IT, Italy","Consorzio Interuniversitario Nazionale per l\u2019Informatica, Verres (AO), IT, Italy"],"affiliations":[{"raw_affiliation_string":"Consorzio Interuniversitario Nazionale per l'Informatica, Verres (AO), IT, Italy","institution_ids":[]},{"raw_affiliation_string":"Consorzio Interuniversitario Nazionale per l\u2019Informatica, Verres (AO), IT, Italy","institution_ids":["https://openalex.org/I4210152452"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5030177680","display_name":"Alfredo Benso","orcid":"https://orcid.org/0000-0003-3433-7739"},"institutions":[{"id":"https://openalex.org/I4210152452","display_name":"Consorzio Interuniversitario Nazionale per l'Informatica","ror":"https://ror.org/03v8v5y65","country_code":"IT","type":"facility","lineage":["https://openalex.org/I4210152452"]},{"id":"https://openalex.org/I177477856","display_name":"Polytechnic University of Turin","ror":"https://ror.org/00bgk9508","country_code":"IT","type":"education","lineage":["https://openalex.org/I177477856"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Alfredo Benso","raw_affiliation_strings":["Consorzio Interuniversitario Nazionale per l'Informatica, Verres (AO), IT, Italy","Department of Control and Computer Engineering, Politecnico di Torino, Torino, IT, Italy","Consorzio Interuniversitario Nazionale per l\u2019Informatica, Verres (AO), IT, Italy"],"affiliations":[{"raw_affiliation_string":"Consorzio Interuniversitario Nazionale per l'Informatica, Verres (AO), IT, Italy","institution_ids":[]},{"raw_affiliation_string":"Department of Control and Computer Engineering, Politecnico di Torino, Torino, IT, Italy","institution_ids":["https://openalex.org/I177477856"]},{"raw_affiliation_string":"Consorzio Interuniversitario Nazionale per l\u2019Informatica, Verres (AO), IT, Italy","institution_ids":["https://openalex.org/I4210152452"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5026593274"],"corresponding_institution_ids":["https://openalex.org/I177477856"],"apc_list":null,"apc_paid":null,"fwci":0.9331,"has_fulltext":true,"cited_by_count":12,"citation_normalized_percentile":{"value":0.7647226,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":97},"biblio":{"volume":"3","issue":"1","first_page":"20","last_page":"20"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5530734658241272},{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.537854790687561},{"id":"https://openalex.org/keywords/medicine","display_name":"Medicine","score":0.5041018724441528},{"id":"https://openalex.org/keywords/health-informatics","display_name":"Health informatics","score":0.42954200506210327},{"id":"https://openalex.org/keywords/pathway-analysis","display_name":"Pathway analysis","score":0.41003331542015076},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.34960150718688965},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.24852120876312256},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2395433485507965},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.21285739541053772},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.14902755618095398},{"id":"https://openalex.org/keywords/public-health","display_name":"Public health","score":0.13835418224334717},{"id":"https://openalex.org/keywords/pathology","display_name":"Pathology","score":0.12088778614997864}],"concepts":[{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5530734658241272},{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.537854790687561},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.5041018724441528},{"id":"https://openalex.org/C145642194","wikidata":"https://www.wikidata.org/wiki/Q870895","display_name":"Health informatics","level":3,"score":0.42954200506210327},{"id":"https://openalex.org/C2779230013","wikidata":"https://www.wikidata.org/wiki/Q25303877","display_name":"Pathway analysis","level":4,"score":0.41003331542015076},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.34960150718688965},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.24852120876312256},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2395433485507965},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.21285739541053772},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.14902755618095398},{"id":"https://openalex.org/C138816342","wikidata":"https://www.wikidata.org/wiki/Q189603","display_name":"Public health","level":2,"score":0.13835418224334717},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.12088778614997864},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/2043-9113-3-20","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2043-9113-3-20","pdf_url":"https://jclinbioinformatics.biomedcentral.com/track/pdf/10.1186/2043-9113-3-20","source":{"id":"https://openalex.org/S141199735","display_name":"Journal of Clinical Bioinformatics","issn_l":"2043-9113","issn":["2043-9113"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Clinical Bioinformatics","raw_type":"journal-article"},{"id":"pmid:24152805","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24152805","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of clinical bioinformatics","raw_type":null},{"id":"pmh:oai:porto.polito.it:2518696","is_oa":true,"landing_page_url":"http://porto.polito.it/2518696/","pdf_url":null,"source":{"id":"https://openalex.org/S4306402038","display_name":"PORTO Publications Open Repository TOrino (Politecnico di Torino)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I177477856","host_organization_name":"Politecnico di Torino","host_organization_lineage":["https://openalex.org/I177477856"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ISSN:2043-9113","raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3875894","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3875894","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Clin Bioinforma","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/2043-9113-3-20","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2043-9113-3-20","pdf_url":"https://jclinbioinformatics.biomedcentral.com/track/pdf/10.1186/2043-9113-3-20","source":{"id":"https://openalex.org/S141199735","display_name":"Journal of Clinical Bioinformatics","issn_l":"2043-9113","issn":["2043-9113"],"is_oa":false,"is_in_doaj":false,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Clinical Bioinformatics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2168493636.pdf","grobid_xml":"https://content.openalex.org/works/W2168493636.grobid-xml"},"referenced_works_count":85,"referenced_works":["https://openalex.org/W83549088","https://openalex.org/W156645367","https://openalex.org/W1606086097","https://openalex.org/W1947221834","https://openalex.org/W1964034855","https://openalex.org/W1964263352","https://openalex.org/W1964716929","https://openalex.org/W1966638085","https://openalex.org/W1972168709","https://openalex.org/W1972815369","https://openalex.org/W1973573456","https://openalex.org/W1975437957","https://openalex.org/W1980409815","https://openalex.org/W1982012088","https://openalex.org/W1988184140","https://openalex.org/W1991766825","https://openalex.org/W1995197723","https://openalex.org/W2001475320","https://openalex.org/W2002495914","https://openalex.org/W2006348395","https://openalex.org/W2008014943","https://openalex.org/W2009163705","https://openalex.org/W2015682764","https://openalex.org/W2015749195","https://openalex.org/W2017426710","https://openalex.org/W2019459677","https://openalex.org/W2019471862","https://openalex.org/W2038540528","https://openalex.org/W2040191060","https://openalex.org/W2040676413","https://openalex.org/W2041282815","https://openalex.org/W2041509376","https://openalex.org/W2041825143","https://openalex.org/W2042151516","https://openalex.org/W2043004358","https://openalex.org/W2043748764","https://openalex.org/W2044832480","https://openalex.org/W2046387002","https://openalex.org/W2048270152","https://openalex.org/W2048431284","https://openalex.org/W2058259577","https://openalex.org/W2060905299","https://openalex.org/W2065831401","https://openalex.org/W2072893505","https://openalex.org/W2076685053","https://openalex.org/W2078744455","https://openalex.org/W2079295092","https://openalex.org/W2090515621","https://openalex.org/W2096089653","https://openalex.org/W2103647350","https://openalex.org/W2105599389","https://openalex.org/W2106061002","https://openalex.org/W2107506912","https://openalex.org/W2110699703","https://openalex.org/W2111619115","https://openalex.org/W2112093664","https://openalex.org/W2114608816","https://openalex.org/W2117431427","https://openalex.org/W2120456037","https://openalex.org/W2121044470","https://openalex.org/W2121890622","https://openalex.org/W2126669894","https://openalex.org/W2129232972","https://openalex.org/W2129585918","https://openalex.org/W2134138358","https://openalex.org/W2134923619","https://openalex.org/W2135457174","https://openalex.org/W2142718844","https://openalex.org/W2143186346","https://openalex.org/W2144758891","https://openalex.org/W2146580269","https://openalex.org/W2151911276","https://openalex.org/W2152407435","https://openalex.org/W2159482845","https://openalex.org/W2161149887","https://openalex.org/W2161859153","https://openalex.org/W2163199119","https://openalex.org/W2163480486","https://openalex.org/W2167215180","https://openalex.org/W2171230529","https://openalex.org/W2295630215","https://openalex.org/W2425561785","https://openalex.org/W2582743722","https://openalex.org/W4242740353","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2119683611","https://openalex.org/W2151866902","https://openalex.org/W2794999358","https://openalex.org/W4388608564","https://openalex.org/W3202981647","https://openalex.org/W2535191691","https://openalex.org/W2041117926","https://openalex.org/W4310482590","https://openalex.org/W2916366636","https://openalex.org/W4231689361"],"abstract_inverted_index":{"Although":[0],"previous":[1],"studies":[2],"suggested":[3],"transcriptional":[4],"regulation":[5,80],"mechanism":[6],"at":[7],"the":[8,13,21,44,83],"pathway":[9],"level":[10],"such":[11],"as":[12,37],"Pathway":[14],"Protection":[15],"Loop,":[16],"a":[17,61,65],"high-level":[18,78],"analysis":[19,84],"like":[20],"one":[22],"proposed":[23],"in":[24,43],"this":[25,77],"paper":[26],"is":[27],"still":[28,69],"missing.":[29],"The":[30],"understanding":[31],"of":[32,46,67],"higher-level":[33],"regulatory":[34],"motifs":[35],"could,":[36],"instance,":[38],"lead":[39],"to":[40,57,71,74,85],"new":[41,53],"approaches":[42],"identification":[45],"therapeutic":[47],"targets":[48],"because":[49],"it":[50],"could":[51],"unveil":[52],"and":[54],"\"indirect\"":[55],"paths":[56],"activate":[58],"or":[59],"silence":[60],"target":[62],"pathway.":[63],"However,":[64],"lot":[66],"work":[68],"needs":[70],"be":[72],"done":[73],"better":[75],"uncover":[76],"inter-pathway":[79],"including":[81],"enlarging":[82],"other":[86],"small":[87],"non-coding":[88],"RNA":[89],"molecules.":[90]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":3}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
