{"id":"https://openalex.org/W2096438591","doi":"https://doi.org/10.1186/2041-1480-5-s1-s2","title":"Statistical algorithms for ontology-based annotation of scientific literature","display_name":"Statistical algorithms for ontology-based annotation of scientific literature","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W2096438591","doi":"https://doi.org/10.1186/2041-1480-5-s1-s2","mag":"2096438591","pmid":"https://pubmed.ncbi.nlm.nih.gov/25093071"},"language":"en","primary_location":{"id":"doi:10.1186/2041-1480-5-s1-s2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-s1-s2","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-S1-S2","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-S1-S2","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113727857","display_name":"Chayan Chakrabarti","orcid":null},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Chayan Chakrabarti","raw_affiliation_strings":["Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063011546","display_name":"Thomas B. Jones","orcid":null},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Thomas B Jones","raw_affiliation_strings":["Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046825469","display_name":"George F. Luger","orcid":"https://orcid.org/0009-0001-8164-5964"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"George F Luger","raw_affiliation_strings":["Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100743221","display_name":"Jiawei Xu","orcid":"https://orcid.org/0000-0002-9920-7161"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jiawei F Xu","raw_affiliation_strings":["Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101618267","display_name":"Matthew D. Turner","orcid":"https://orcid.org/0000-0002-4417-1042"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew D Turner","raw_affiliation_strings":["Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA ; Mind Research Network, Albuquerque, New Mexico, USA","Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA ; Mind Research Network, Albuquerque, New Mexico, USA","institution_ids":[]},{"raw_affiliation_string":"Department of Computer Science, University of New Mexico, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047405979","display_name":"Angela R. Laird","orcid":"https://orcid.org/0000-0003-3379-8744"},"institutions":[{"id":"https://openalex.org/I19700959","display_name":"Florida International University","ror":"https://ror.org/02gz6gg07","country_code":"US","type":"education","lineage":["https://openalex.org/I19700959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Angela R Laird","raw_affiliation_strings":["Department of Physics, Florida International University, Miami, Florida, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physics, Florida International University, Miami, Florida, USA","institution_ids":["https://openalex.org/I19700959"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005182829","display_name":"Jessica A. Turner","orcid":"https://orcid.org/0000-0003-0076-8434"},"institutions":[{"id":"https://openalex.org/I1334567473","display_name":"Mind Research Network","ror":"https://ror.org/032cjfs80","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I1334567473"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jessica A Turner","raw_affiliation_strings":["Mind Research Network, Albuquerque, New Mexico, USA ; Department of Psychology and the Neuroscience Institute, Georgia State University, Atlanta, Georgia, USA","Mind Research Network, Albuquerque, New Mexico, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Mind Research Network, Albuquerque, New Mexico, USA ; Department of Psychology and the Neuroscience Institute, Georgia State University, Atlanta, Georgia, USA","institution_ids":[]},{"raw_affiliation_string":"Mind Research Network, Albuquerque, New Mexico, USA","institution_ids":["https://openalex.org/I1334567473"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5113727857"],"corresponding_institution_ids":["https://openalex.org/I169521973"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":0.5692,"has_fulltext":true,"cited_by_count":7,"citation_normalized_percentile":{"value":0.67625672,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":96},"biblio":{"volume":"5","issue":"Suppl 1","first_page":"S2","last_page":"S2"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9182999730110168,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9182999730110168,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.011699999682605267,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T13062","display_name":"Cognitive Computing and Networks","score":0.008100000210106373,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8704690933227539},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5663338303565979},{"id":"https://openalex.org/keywords/leverage","display_name":"Leverage (statistics)","score":0.4864473342895508},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.47309044003486633},{"id":"https://openalex.org/keywords/ontology-alignment","display_name":"Ontology alignment","score":0.4490969777107239},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.4367569386959076},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.4267022907733917},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.42498844861984253},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.38252317905426025},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.37561967968940735},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.36325064301490784},{"id":"https://openalex.org/keywords/domain-knowledge","display_name":"Domain knowledge","score":0.3399962782859802},{"id":"https://openalex.org/keywords/upper-ontology","display_name":"Upper ontology","score":0.3162612020969391}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8704690933227539},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5663338303565979},{"id":"https://openalex.org/C153083717","wikidata":"https://www.wikidata.org/wiki/Q6535263","display_name":"Leverage (statistics)","level":2,"score":0.4864473342895508},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.47309044003486633},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.4490969777107239},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.4367569386959076},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.4267022907733917},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.42498844861984253},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.38252317905426025},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.37561967968940735},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.36325064301490784},{"id":"https://openalex.org/C207685749","wikidata":"https://www.wikidata.org/wiki/Q2088941","display_name":"Domain knowledge","level":2,"score":0.3399962782859802},{"id":"https://openalex.org/C78726541","wikidata":"https://www.wikidata.org/wiki/Q3882785","display_name":"Upper ontology","level":3,"score":0.3162612020969391},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":7,"locations":[{"id":"doi:10.1186/2041-1480-5-s1-s2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-s1-s2","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-S1-S2","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:25093071","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/25093071","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:digitalcommons.fiu.edu:physics_fac-1041","is_oa":true,"landing_page_url":"https://digitalcommons.fiu.edu/physics_fac/32","pdf_url":null,"source":{"id":"https://openalex.org/S4306401637","display_name":"Florida International University Digital Commons (Florida International University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I19700959","host_organization_name":"Florida International University","host_organization_lineage":["https://openalex.org/I19700959"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Department of Physics","raw_type":"text"},{"id":"pmh:oai:scholarworks.gsu.edu:psych_facpub-1206","is_oa":true,"landing_page_url":"https://scholarworks.gsu.edu/psych_facpub/205","pdf_url":null,"source":{"id":"https://openalex.org/S4406922693","display_name":"Digital Archive @ GSU","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Psychology Faculty Publications","raw_type":"text"},{"id":"pmh:oai:scholarworks.gsu.edu:psych_facpub-1210","is_oa":true,"landing_page_url":"https://scholarworks.gsu.edu/psych_facpub/208","pdf_url":null,"source":{"id":"https://openalex.org/S4406922693","display_name":"Digital Archive @ GSU","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Psychology Faculty Publications","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4108869","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4108869","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:oai:scholarworks.gsu.edu:20.500.14694/13237","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-S1-S2","pdf_url":null,"source":{"id":"https://openalex.org/S4306400481","display_name":"Counseling And Psychological Services Dissertations (Georgia State University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I181565077","host_organization_name":"Georgia State University","host_organization_lineage":["https://openalex.org/I181565077"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null}],"best_oa_location":{"id":"doi:10.1186/2041-1480-5-s1-s2","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-s1-s2","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-S1-S2","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/16","score":0.7300000190734863,"display_name":"Peace, Justice and strong institutions"}],"awards":[{"id":"https://openalex.org/G2255377836","display_name":null,"funder_award_id":"R01-MH084812","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2353141143","display_name":null,"funder_award_id":"R56-MH097870","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G2656409605","display_name":null,"funder_award_id":"R01-MH074457","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G4504392102","display_name":null,"funder_award_id":"MH074457","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5165734798","display_name":null,"funder_award_id":"R56-MH097870","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G5272969042","display_name":null,"funder_award_id":"MH084812","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G6221408846","display_name":null,"funder_award_id":"R56 MH097870","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G703070721","display_name":null,"funder_award_id":"MH084812","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G7114315694","display_name":null,"funder_award_id":"R01-MH084812","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G7178836966","display_name":null,"funder_award_id":"R01-MH074457","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G8105092454","display_name":null,"funder_award_id":"MH074457","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2096438591.pdf","grobid_xml":"https://content.openalex.org/works/W2096438591.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W55768394","https://openalex.org/W1447066968","https://openalex.org/W1483822252","https://openalex.org/W1499516075","https://openalex.org/W1512098439","https://openalex.org/W1553529581","https://openalex.org/W1692319794","https://openalex.org/W1746680969","https://openalex.org/W1854866626","https://openalex.org/W1873332500","https://openalex.org/W1963590969","https://openalex.org/W1981276685","https://openalex.org/W1986007546","https://openalex.org/W1999954155","https://openalex.org/W2073045674","https://openalex.org/W2073878920","https://openalex.org/W2077509789","https://openalex.org/W2093517881","https://openalex.org/W2096438591","https://openalex.org/W2098418076","https://openalex.org/W2114281298","https://openalex.org/W2120322324","https://openalex.org/W2127570136","https://openalex.org/W2134015035","https://openalex.org/W2138709957","https://openalex.org/W2140680577","https://openalex.org/W2146327010","https://openalex.org/W2157661749","https://openalex.org/W2161578080","https://openalex.org/W2404797742","https://openalex.org/W2567948266","https://openalex.org/W6674831559"],"related_works":["https://openalex.org/W2184133400","https://openalex.org/W337103899","https://openalex.org/W2064503500","https://openalex.org/W2264478587","https://openalex.org/W2393185060","https://openalex.org/W2373434917","https://openalex.org/W2911326759","https://openalex.org/W2000589228","https://openalex.org/W2132935926","https://openalex.org/W2392837055"],"abstract_inverted_index":{"BACKGROUND:":[0],"Ontologies":[1],"encode":[2],"relationships":[3],"within":[4,109],"a":[5,78,163],"domain":[6,143],"in":[7,22,71,97,166,169,195,214,219],"robust":[8],"data":[9,17,135],"structures":[10],"that":[11,24,81,119,161,205],"can":[12,48,187],"be":[13],"used":[14],"to":[15,140],"annotate":[16],"objects,":[18],"including":[19],"scientific":[20],"papers,":[21],"ways":[23],"ease":[25],"tasks":[26],"such":[27],"as":[28],"search":[29],"and":[30,39,62,156,211],"meta-analysis.":[31],"However,":[32],"the":[33,83,91,94,98,110,121,128,167,172,176,189,193,203,215,220],"annotation":[34,85],"process":[35],"requires":[36],"significant":[37],"time":[38],"effort":[40],"when":[41],"performed":[42],"by":[43,88,192],"humans.":[44],"Text":[45],"mining":[46,183],"algorithms":[47],"facilitate":[49],"this":[50],"process,":[51],"but":[52],"they":[53],"render":[54],"an":[55,72,117,196],"analysis":[56],"mainly":[57],"based":[58],"upon":[59],"keyword,":[60],"synonym":[61],"semantic":[63],"matching.":[64],"They":[65],"do":[66],"not":[67],"leverage":[68],"information":[69],"embedded":[70],"ontology's":[73],"structure.":[74],"METHODS:":[75],"We":[76,115,146,200],"present":[77],"probabilistic":[79],"framework":[80,186],"facilitates":[82],"automatic":[84],"of":[86,124,131,171,175,217],"literature":[87,108],"indirectly":[89],"modeling":[90],"restrictions":[92],"among":[93],"different":[95],"classes":[96],"ontology.":[99],"Our":[100,134],"research":[101],"focuses":[102],"on":[103],"annotating":[104],"human":[105,164],"functional":[106],"neuroimaging":[107],"Cognitive":[111],"Paradigm":[112],"Ontology":[113],"(CogPO).":[114],"use":[116],"approach":[118],"combines":[120],"stochastic":[122],"simplicity":[123],"na\u00efve":[125,151],"Bayes":[126],"with":[127],"formal":[129],"transparency":[130],"decision":[132],"trees.":[133],"structure":[136],"is":[137],"easily":[138],"modifiable":[139],"reflect":[141],"changing":[142],"knowledge.":[144],"RESULTS:":[145],"compare":[147],"our":[148,185],"results":[149],"across":[150],"Bayes,":[152],"Bayesian":[153],"Decision":[154,158],"Trees,":[155],"Constrained":[157],"Tree":[159],"classifiers":[160],"keep":[162],"expert":[165,221],"loop,":[168],"terms":[170],"quality":[173],"measure":[174],"F1-mirco":[177],"score.":[178],"CONCLUSIONS:":[179],"Unlike":[180],"traditional":[181],"text":[182],"algorithms,":[184],"model":[188],"knowledge":[190],"encoded":[191],"dependencies":[194,213],"ontology,":[197],"albeit":[198],"indirectly.":[199],"successfully":[201],"exploit":[202],"fact":[204],"CogPO":[206],"has":[207],"explicitly":[208],"stated":[209],"restrictions,":[210],"implicit":[212],"form":[216],"patterns":[218],"curated":[222],"annotations.":[223]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2}],"updated_date":"2026-06-24T13:16:06.693445","created_date":"2025-10-10T00:00:00"}
