{"id":"https://openalex.org/W2104591793","doi":"https://doi.org/10.1186/2041-1480-5-23","title":"An ontological modeling approach for abnormal states and its application in the medical domain","display_name":"An ontological modeling approach for abnormal states and its application in the medical domain","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W2104591793","doi":"https://doi.org/10.1186/2041-1480-5-23","mag":"2104591793","pmid":"https://pubmed.ncbi.nlm.nih.gov/24944781"},"language":"en","primary_location":{"id":"doi:10.1186/2041-1480-5-23","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-23","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-23","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-23","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5067757315","display_name":"Yuki Yamagata","orcid":"https://orcid.org/0000-0002-9673-1283"},"institutions":[{"id":"https://openalex.org/I98285908","display_name":"Osaka University","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"Yuki Yamagata","raw_affiliation_strings":["ISIR, Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka, Japan"],"affiliations":[{"raw_affiliation_string":"ISIR, Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka, Japan","institution_ids":["https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051448264","display_name":"Kouji Kozaki","orcid":"https://orcid.org/0000-0003-4578-4980"},"institutions":[{"id":"https://openalex.org/I6178835","display_name":"Ibaraki University","ror":"https://ror.org/00sjd5653","country_code":"JP","type":"education","lineage":["https://openalex.org/I6178835"]},{"id":"https://openalex.org/I98285908","display_name":"Osaka University","ror":"https://ror.org/035t8zc32","country_code":"JP","type":"education","lineage":["https://openalex.org/I98285908"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kouji Kozaki","raw_affiliation_strings":["ISIR, Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka, Japan","ISIR, Osaka Univ., Ibaraki, Japan"],"affiliations":[{"raw_affiliation_string":"ISIR, Osaka University, 8-1 Mihogaoka, Ibaraki, Osaka, Japan","institution_ids":["https://openalex.org/I98285908"]},{"raw_affiliation_string":"ISIR, Osaka Univ., Ibaraki, Japan","institution_ids":["https://openalex.org/I6178835","https://openalex.org/I98285908"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101780955","display_name":"Takeshi Imai","orcid":"https://orcid.org/0000-0002-8708-079X"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Takeshi Imai","raw_affiliation_strings":["Department of Medical Informatics, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, Japan"],"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, Japan","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052636056","display_name":"Kazuhiko Ohe","orcid":"https://orcid.org/0000-0002-4296-9536"},"institutions":[{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Kazuhiko Ohe","raw_affiliation_strings":["Department of Medical Informatics, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, Japan","Department of Medical Informatics Graduate School of Medicine, The University of Tokyo, Bunkyo-ku, Japan#TAB#"],"affiliations":[{"raw_affiliation_string":"Department of Medical Informatics, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo, Japan","institution_ids":["https://openalex.org/I74801974"]},{"raw_affiliation_string":"Department of Medical Informatics Graduate School of Medicine, The University of Tokyo, Bunkyo-ku, Japan#TAB#","institution_ids":["https://openalex.org/I74801974"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5078525116","display_name":"Riichiro Mizoguchi","orcid":"https://orcid.org/0000-0001-7048-2904"},"institutions":[{"id":"https://openalex.org/I177738480","display_name":"Japan Advanced Institute of Science and Technology","ror":"https://ror.org/03frj4r98","country_code":"JP","type":"education","lineage":["https://openalex.org/I177738480"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Riichiro Mizoguchi","raw_affiliation_strings":["Research Center for Service Science, School of Knowledge Science, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa, Japan"],"affiliations":[{"raw_affiliation_string":"Research Center for Service Science, School of Knowledge Science, Japan Advanced Institute of Science and Technology, 1-1 Asahidai, Nomi, Ishikawa, Japan","institution_ids":["https://openalex.org/I177738480"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5067757315"],"corresponding_institution_ids":["https://openalex.org/I98285908"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":1.1408,"has_fulltext":true,"cited_by_count":21,"citation_normalized_percentile":{"value":0.77766659,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"5","issue":"1","first_page":"23","last_page":"23"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9930999875068665,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10028","display_name":"Topic Modeling","score":0.9861000180244446,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7491071224212646},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.6286267042160034},{"id":"https://openalex.org/keywords/task","display_name":"Task (project management)","score":0.5679595470428467},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.49090248346328735},{"id":"https://openalex.org/keywords/flexibility","display_name":"Flexibility (engineering)","score":0.481221467256546},{"id":"https://openalex.org/keywords/hierarchy","display_name":"Hierarchy","score":0.4777776002883911},{"id":"https://openalex.org/keywords/generality","display_name":"Generality","score":0.4751679301261902},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.44618481397628784},{"id":"https://openalex.org/keywords/raw-data","display_name":"Raw data","score":0.4254938066005707},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.41520795226097107},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3607909679412842},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3341929614543915},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.10966086387634277},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.0980955958366394},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.08570700883865356}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7491071224212646},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.6286267042160034},{"id":"https://openalex.org/C2780451532","wikidata":"https://www.wikidata.org/wiki/Q759676","display_name":"Task (project management)","level":2,"score":0.5679595470428467},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.49090248346328735},{"id":"https://openalex.org/C2780598303","wikidata":"https://www.wikidata.org/wiki/Q65921492","display_name":"Flexibility (engineering)","level":2,"score":0.481221467256546},{"id":"https://openalex.org/C31170391","wikidata":"https://www.wikidata.org/wiki/Q188619","display_name":"Hierarchy","level":2,"score":0.4777776002883911},{"id":"https://openalex.org/C2780767217","wikidata":"https://www.wikidata.org/wiki/Q5532421","display_name":"Generality","level":2,"score":0.4751679301261902},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.44618481397628784},{"id":"https://openalex.org/C132964779","wikidata":"https://www.wikidata.org/wiki/Q2110223","display_name":"Raw data","level":2,"score":0.4254938066005707},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.41520795226097107},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3607909679412842},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3341929614543915},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.10966086387634277},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0980955958366394},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.08570700883865356},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C542102704","wikidata":"https://www.wikidata.org/wiki/Q183257","display_name":"Psychotherapist","level":1,"score":0.0},{"id":"https://openalex.org/C34447519","wikidata":"https://www.wikidata.org/wiki/Q179522","display_name":"Market economy","level":1,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/2041-1480-5-23","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-23","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-23","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:24944781","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24944781","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:dspace.jaist.ac.jp:10119/12232","is_oa":true,"landing_page_url":"http://hdl.handle.net/10119/12232","pdf_url":null,"source":{"id":"https://openalex.org/S4406922663","display_name":"JAIST Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":""},{"id":"pmh:oai:pubmedcentral.nih.gov:4062306","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4062306","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/2041-1480-5-23","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-23","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-23","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","score":0.550000011920929,"id":"https://metadata.un.org/sdg/4"}],"awards":[{"id":"https://openalex.org/G5256887504","display_name":null,"funder_award_id":"Japan Society for the Promotion of Science (JSPS)","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G6200307566","display_name":null,"funder_award_id":"Funding Program for World-Leading I","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G7126264696","display_name":null,"funder_award_id":"FIRST","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G7752643416","display_name":null,"funder_award_id":"Japan","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"},{"id":"https://openalex.org/G916815637","display_name":null,"funder_award_id":"Funding Program for World-Leading Innovative R&amp;D on Science and Technology","funder_id":"https://openalex.org/F4320334764","funder_display_name":"Japan Society for the Promotion of Science"}],"funders":[{"id":"https://openalex.org/F4320322832","display_name":"University of Tokyo","ror":"https://ror.org/057zh3y96"},{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2104591793.pdf","grobid_xml":"https://content.openalex.org/works/W2104591793.grobid-xml"},"referenced_works_count":18,"referenced_works":["https://openalex.org/W31740709","https://openalex.org/W1490920196","https://openalex.org/W1497682552","https://openalex.org/W1501546233","https://openalex.org/W1552995811","https://openalex.org/W1927436953","https://openalex.org/W2089857530","https://openalex.org/W2113142309","https://openalex.org/W2114561888","https://openalex.org/W2135140530","https://openalex.org/W2159092541","https://openalex.org/W2344667314","https://openalex.org/W2395650564","https://openalex.org/W2398647009","https://openalex.org/W2403440808","https://openalex.org/W2403559332","https://openalex.org/W3140598694","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2045049461","https://openalex.org/W4381094582","https://openalex.org/W1978893398","https://openalex.org/W1977906818","https://openalex.org/W2369625323","https://openalex.org/W2364579609","https://openalex.org/W1522139108","https://openalex.org/W2353528968","https://openalex.org/W2032776242","https://openalex.org/W1481694090"],"abstract_inverted_index":{"Our":[0],"results":[1,27],"showed":[2,28],"that":[3,29],"our":[4,30],"representation":[5],"framework":[6],"promotes":[7],"interoperability":[8],"and":[9,18],"flexibility":[10],"of":[11,21],"the":[12,26],"quantitative":[13],"raw":[14],"data,":[15],"qualitative":[16],"information,":[17],"generic/conceptual":[19],"knowledge":[20],"abnormal":[22,37],"states.":[23],"In":[24],"addition,":[25],"ontological":[31],"model":[32],"have":[33],"found":[34],"commonalities":[35],"in":[36],"states":[38],"among":[39],"diseases":[40],"across":[41],"13":[42],"medical":[43],"departments.":[44]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
