{"id":"https://openalex.org/W2101341879","doi":"https://doi.org/10.1186/2041-1480-5-16","title":"A 2013 workshop: vaccine and drug ontology studies (VDOS 2013)","display_name":"A 2013 workshop: vaccine and drug ontology studies (VDOS 2013)","publication_year":2014,"publication_date":"2014-01-01","ids":{"openalex":"https://openalex.org/W2101341879","doi":"https://doi.org/10.1186/2041-1480-5-16","mag":"2101341879","pmid":"https://pubmed.ncbi.nlm.nih.gov/24650607"},"language":"en","primary_location":{"id":"doi:10.1186/2041-1480-5-16","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-16","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-16","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-16","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076058129","display_name":"Cui Tao","orcid":"https://orcid.org/0000-0002-4267-1924"},"institutions":[{"id":"https://openalex.org/I919571938","display_name":"The University of Texas Health Science Center at Houston","ror":"https://ror.org/03gds6c39","country_code":"US","type":"education","lineage":["https://openalex.org/I919571938"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Cui Tao","raw_affiliation_strings":["School of Biomedical Informatics, The University of Texas Health Science Center, Houston, TX, USA. cui.tao@uth.tmc.edu","School of Biomedical Informatics, The University of Texas Health Science Center, Houston, TX, USA"],"affiliations":[{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center, Houston, TX, USA. cui.tao@uth.tmc.edu","institution_ids":[]},{"raw_affiliation_string":"School of Biomedical Informatics, The University of Texas Health Science Center, Houston, TX, USA","institution_ids":["https://openalex.org/I919571938"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024742201","display_name":"Yongqun He","orcid":"https://orcid.org/0000-0001-9189-9661"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan\u2013Ann Arbor","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Yongqun He","raw_affiliation_strings":["Unit for Laboratory Animal Medicine, Department of Microbiology and Immunology, and Center for Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, MI, USA","Unit for Laboratory Animal Medicine, Department of Microbiology and Immunology, And Center for Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, USA"],"affiliations":[{"raw_affiliation_string":"Unit for Laboratory Animal Medicine, Department of Microbiology and Immunology, and Center for Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, MI, USA","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Unit for Laboratory Animal Medicine, Department of Microbiology and Immunology, And Center for Computational Medicine and Bioinformatics, University of Michigan Medical School, Ann Arbor, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5091313166","display_name":"Sivaram Arabandi","orcid":"https://orcid.org/0000-0002-2973-6228"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Sivaram Arabandi","raw_affiliation_strings":["Ontopro LLC, Houston, TX, USA","Ontopro LLC"],"affiliations":[{"raw_affiliation_string":"Ontopro LLC, Houston, TX, USA","institution_ids":[]},{"raw_affiliation_string":"Ontopro LLC","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5076058129"],"corresponding_institution_ids":["https://openalex.org/I919571938"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":0.427,"has_fulltext":true,"cited_by_count":6,"citation_normalized_percentile":{"value":0.64360913,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"5","issue":"1","first_page":"16","last_page":"16"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12576","display_name":"vaccines and immunoinformatics approaches","score":0.9882000088691711,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9728000164031982,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7789744138717651},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5748085379600525},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.49085670709609985},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.46267053484916687},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.36894309520721436},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3262079358100891}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7789744138717651},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5748085379600525},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.49085670709609985},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.46267053484916687},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.36894309520721436},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3262079358100891},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/2041-1480-5-16","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-16","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-16","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:24650607","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24650607","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:europepmc.org:2972810","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3994568","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/2041-1480-5-16","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-5-16","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-5-16","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4300000071525574,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2101341879.pdf","grobid_xml":"https://content.openalex.org/works/W2101341879.grobid-xml"},"referenced_works_count":10,"referenced_works":["https://openalex.org/W1836039725","https://openalex.org/W2098987784","https://openalex.org/W2099291068","https://openalex.org/W2124665312","https://openalex.org/W2138903443","https://openalex.org/W2148546618","https://openalex.org/W2165852682","https://openalex.org/W2168091868","https://openalex.org/W2396194645","https://openalex.org/W2402441198"],"related_works":["https://openalex.org/W2748952813","https://openalex.org/W2003333417","https://openalex.org/W2378862226","https://openalex.org/W118236634","https://openalex.org/W2355326633","https://openalex.org/W2804669904","https://openalex.org/W2149777447","https://openalex.org/W2347456287","https://openalex.org/W2121651557","https://openalex.org/W2782969047"],"abstract_inverted_index":{"The":[0,80,122],"2013":[1],"\"Vaccine":[2],"and":[3,15,19,22,55,68,99,106,109,118,139,145,147],"Drug":[4],"Ontology":[5],"Studies\"":[6],"(VDOS":[7],"2013)":[8],"international":[9],"workshop":[10,82],"series":[11,83],"focuses":[12,131],"on":[13,132],"vaccine-":[14],"drug-related":[16],"ontology":[17,45,137,142,149],"modeling":[18],"applications.":[20,150],"Drugs":[21],"vaccines":[23,54],"have":[24,39],"contributed":[25],"to":[26,47],"dramatic":[27],"improvements":[28],"in":[29,42,96,127],"public":[30],"health":[31],"worldwide.":[32],"Over":[33],"the":[34,43,94,97],"last":[35],"decade,":[36],"tremendous":[37],"efforts":[38],"been":[40],"made":[41],"biomedical":[44,102],"community":[46],"ontologically":[48],"represent":[49],"various":[50],"areas":[51],"associated":[52],"with":[53],"drugs":[56,108],"-":[57],"extending":[58],"existing":[59],"clinical":[60],"terminology":[61],"systems":[62],"such":[63,76],"as":[64,70,72,77,91,93],"SNOMED,":[65],"RxNorm,":[66],"NDF-RT,":[67],"MedDRA,":[69],"well":[71,92],"developing":[73],"new":[74],"models":[75],"Vaccine":[78],"Ontology.":[79],"VDOS":[81],"provides":[84],"a":[85],"platform":[86],"for":[87,104],"discussing":[88],"innovative":[89],"solutions":[90],"challenges":[95],"development":[98,138],"applications":[100],"of":[101],"ontologies":[103],"representing":[105],"analyzing":[107],"vaccines,":[110],"their":[111],"administration,":[112],"host":[113],"immune":[114],"responses,":[115],"adverse":[116],"events,":[117],"other":[119],"related":[120],"topics.":[121],"six":[123],"full-length":[124],"papers":[125],"included":[126],"this":[128],"thematic":[129],"issue":[130],"three":[133],"main":[134],"areas:":[135],"(i)":[136],"representation,":[140],"(ii)":[141],"mapping,":[143],"maintaining":[144],"auditing,":[146],"(iii)":[148]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-03-20T23:20:44.827607","created_date":"2025-10-10T00:00:00"}
