{"id":"https://openalex.org/W2168091868","doi":"https://doi.org/10.1186/2041-1480-4-44","title":"Building a drug ontology based on RxNorm and other sources","display_name":"Building a drug ontology based on RxNorm and other sources","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2168091868","doi":"https://doi.org/10.1186/2041-1480-4-44","mag":"2168091868","pmid":"https://pubmed.ncbi.nlm.nih.gov/24345026"},"language":"en","primary_location":{"id":"doi:10.1186/2041-1480-4-44","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-44","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-44","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-44","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5007705764","display_name":"Josh Hanna","orcid":"https://orcid.org/0000-0002-4600-1258"},"institutions":[{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Josh Hanna","raw_affiliation_strings":["Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA. jhanna@uams.edu","Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA. jhanna@uams.edu","institution_ids":[]},{"raw_affiliation_string":"Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA","institution_ids":["https://openalex.org/I79620101"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034804785","display_name":"Eric Joseph","orcid":null},"institutions":[{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Eric Joseph","raw_affiliation_strings":["Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA","institution_ids":["https://openalex.org/I79620101"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047229883","display_name":"Mathias Brochhausen","orcid":"https://orcid.org/0000-0003-1834-3856"},"institutions":[{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mathias Brochhausen","raw_affiliation_strings":["Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA","institution_ids":["https://openalex.org/I79620101"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076610873","display_name":"William R. Hogan","orcid":"https://orcid.org/0000-0002-9881-1017"},"institutions":[{"id":"https://openalex.org/I79620101","display_name":"University of Arkansas for Medical Sciences","ror":"https://ror.org/00xcryt71","country_code":"US","type":"education","lineage":["https://openalex.org/I79620101"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William R Hogan","raw_affiliation_strings":["Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Division of Biomedical Informatics, University of Akransas for Medical Sciences, Little Rock, AR, USA","institution_ids":["https://openalex.org/I79620101"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5007705764"],"corresponding_institution_ids":["https://openalex.org/I79620101"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":2.3933,"has_fulltext":true,"cited_by_count":82,"citation_normalized_percentile":{"value":0.89194723,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"4","issue":"1","first_page":"44","last_page":"44"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7764999866485596,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.7764999866485596,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.17569999396800995,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.009200000204145908,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7235298752784729},{"id":"https://openalex.org/keywords/modular-design","display_name":"Modular design","score":0.6538088917732239},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.5201483368873596},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.45545855164527893},{"id":"https://openalex.org/keywords/terminology","display_name":"Terminology","score":0.4337603449821472},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4153253436088562},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.25091278553009033}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7235298752784729},{"id":"https://openalex.org/C101468663","wikidata":"https://www.wikidata.org/wiki/Q1620158","display_name":"Modular design","level":2,"score":0.6538088917732239},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.5201483368873596},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.45545855164527893},{"id":"https://openalex.org/C547195049","wikidata":"https://www.wikidata.org/wiki/Q1725664","display_name":"Terminology","level":2,"score":0.4337603449821472},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4153253436088562},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.25091278553009033},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[],"locations_count":4,"locations":[{"id":"doi:10.1186/2041-1480-4-44","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-44","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-44","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:24345026","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24345026","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.402.7698","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.402.7698","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://ceur-ws.org/Vol-1061/Paper7_vdos2013.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2912997","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3931349","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/2041-1480-4-44","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-44","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-44","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5070482119","display_name":null,"funder_award_id":"UL1TR000039","funder_id":"https://openalex.org/F4320310362","funder_display_name":"Arkansas Biosciences Institute"},{"id":"https://openalex.org/G7136057462","display_name":null,"funder_award_id":"UL1TR000039","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G7599130707","display_name":null,"funder_award_id":"R01GM101151","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G8561788475","display_name":null,"funder_award_id":"UL1TR000039","funder_id":"https://openalex.org/F4320337472","funder_display_name":"National Center for Advancing Translational Sciences"}],"funders":[{"id":"https://openalex.org/F4320310362","display_name":"Arkansas Biosciences Institute","ror":"https://ror.org/00xcryt71"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337472","display_name":"National Center for Advancing Translational Sciences","ror":"https://ror.org/04pw6fb54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2168091868.pdf","grobid_xml":"https://content.openalex.org/works/W2168091868.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W998294","https://openalex.org/W47049801","https://openalex.org/W167982605","https://openalex.org/W430152140","https://openalex.org/W1495226832","https://openalex.org/W1511848092","https://openalex.org/W1601038846","https://openalex.org/W1901491415","https://openalex.org/W1934602670","https://openalex.org/W2033377040","https://openalex.org/W2125904022","https://openalex.org/W2396194645","https://openalex.org/W2567583209","https://openalex.org/W2985505473"],"related_works":["https://openalex.org/W2350593162","https://openalex.org/W2390350206","https://openalex.org/W1969477129","https://openalex.org/W2921208823","https://openalex.org/W2353483812","https://openalex.org/W2131808775","https://openalex.org/W2130038259","https://openalex.org/W2360756181","https://openalex.org/W2374093222","https://openalex.org/W2359533638"],"abstract_inverted_index":{"BACKGROUND:":[0],"We":[1,119],"built":[2,120],"the":[3,40,48,78,133,155,213,223],"Drug":[4],"Ontology":[5],"(DrOn)":[6],"because":[7],"we":[8,42,61,87],"required":[9],"correct":[10],"and":[11,24,96,130,135,139,171,205,221],"consistent":[12],"drug":[13,52,74,188,201],"information":[14,53,112],"in":[15,20,50,67,122,150,157,167,175,217],"a":[16,72,123,168,176,196],"format":[17],"for":[18],"use":[19],"semantic":[21],"web":[22],"applications,":[23],"no":[25],"existing":[26,55],"resource":[27],"met":[28],"this":[29,65],"requirement":[30],"or":[31],"could":[32],"be":[33],"altered":[34],"to":[35,102,126,136,141],"meet":[36],"it.":[37],"One":[38],"of":[39,81,94,105,132,181,200,212,225],"obstacles":[41],"faced":[43],"when":[44],"creating":[45],"DrOn":[46,121,158,182,194],"was":[47],"difficulty":[49],"reusing":[51],"from":[54,91,113,145,163],"sources.":[56],"The":[57],"primary":[58],"external":[59],"source":[60,147],"have":[62],"used":[63],"at":[64],"stage":[66],"DrOn's":[68],"development":[69,131],"is":[70,195],"RxNorm,":[71],"standard":[73],"terminology":[75],"curated":[76],"by":[77,173],"National":[79],"Library":[80],"Medicine":[82],"(NLM).":[83],"To":[84],"build":[85],"DrOn,":[86],"(1)":[88],"mined":[89],"data":[90],"historical":[92],"releases":[93],"RxNorm":[95,100,164],"(2)":[97],"mapped":[98],"many":[99,211],"entities":[101],"Chemical":[103],"Entities":[104],"Biological":[106],"Interest":[107],"(ChEBI)":[108],"classes,":[109],"pulling":[110],"relevant":[111],"ChEBI":[114],"while":[115],"doing":[116],"so.":[117],"RESULTS:":[118],"modular":[124],"fashion":[125],"facilitate":[127],"simpler":[128],"extension":[129],"ontology":[134,199],"allow":[137],"reasoning":[138],"construction":[140],"scale.":[142],"Classes":[143],"derived":[144,162],"each":[146],"are":[148,160,165],"serialized":[149],"separate":[151,169],"modules.":[152],"For":[153],"example,":[154],"classes":[156,174],"that":[159,209],"programmatically":[161],"stored":[166],"module":[170,180],"subsumed":[172],"manually-curated,":[177],"realist,":[178],"upper-level":[179],"with":[183],"terms":[184],"such":[185],"as":[186],"'clinical":[187],"role',":[189],"'tablet',":[190],"'capsule',":[191],"etc.":[192],"CONCLUSIONS:":[193],"modular,":[197],"extensible":[198],"products,":[202],"their":[203,206],"ingredients,":[204],"biological":[207],"activity":[208],"avoids":[210],"fundamental":[214],"flaws":[215],"found":[216],"other,":[218],"similar":[219],"artifacts":[220],"meets":[222],"requirements":[224],"our":[226],"comparative-effectiveness":[227],"research":[228],"use-case.":[229]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":13},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":12},{"year":2018,"cited_by_count":7},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":5}],"updated_date":"2026-04-29T09:16:38.111599","created_date":"2025-10-10T00:00:00"}
