{"id":"https://openalex.org/W2136067605","doi":"https://doi.org/10.1186/2041-1480-4-36","title":"Rat Strain Ontology: structured controlled vocabulary designed to facilitate access to strain data at RGD","display_name":"Rat Strain Ontology: structured controlled vocabulary designed to facilitate access to strain data at RGD","publication_year":2013,"publication_date":"2013-01-01","ids":{"openalex":"https://openalex.org/W2136067605","doi":"https://doi.org/10.1186/2041-1480-4-36","mag":"2136067605","pmid":"https://pubmed.ncbi.nlm.nih.gov/24267899"},"language":"en","primary_location":{"id":"doi:10.1186/2041-1480-4-36","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-36","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-36","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-36","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109920650","display_name":"Rajni Nigam","orcid":null},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Rajni Nigam","raw_affiliation_strings":["Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee 53226-3548, WI, USA. rnigam@mcw.edu","Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee 53226-3548, WI, USA. rnigam@mcw.edu","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113682980","display_name":"Diane H. Munzenmaier","orcid":null},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Diane H Munzenmaier","raw_affiliation_strings":["Department of Physiology, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physiology, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006311402","display_name":"Elizabeth A. Worthey","orcid":"https://orcid.org/0000-0003-4083-7764"},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Elizabeth A Worthey","raw_affiliation_strings":["Department of Pediatrics, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pediatrics, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089133523","display_name":"Melinda R. Dwinell","orcid":"https://orcid.org/0000-0002-9528-3618"},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Melinda R Dwinell","raw_affiliation_strings":["Department of Physiology, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physiology, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031193159","display_name":"Mary Shimoyama","orcid":"https://orcid.org/0000-0003-1176-0796"},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mary Shimoyama","raw_affiliation_strings":["Department of Surgery, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Surgery, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070802128","display_name":"Howard J. Jacob","orcid":"https://orcid.org/0000-0002-1521-3055"},"institutions":[{"id":"https://openalex.org/I204308271","display_name":"Medical College of Wisconsin","ror":"https://ror.org/00qqv6244","country_code":"US","type":"education","lineage":["https://openalex.org/I204308271"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Howard J Jacob","raw_affiliation_strings":["Department of Physiology, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Physiology, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]},{"raw_affiliation_string":"Human and Molecular Genetics Center, Medical College of Wisconsin, 8701 Watertown Plank Rd, Milwaukee, 53226-3548, WI, USA","institution_ids":["https://openalex.org/I204308271"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5109920650"],"corresponding_institution_ids":["https://openalex.org/I204308271"],"apc_list":{"value":1340,"currency":"USD","value_usd":1340},"apc_paid":{"value":1340,"currency":"USD","value_usd":1340},"fwci":0.4128,"has_fulltext":true,"cited_by_count":14,"citation_normalized_percentile":{"value":0.63868535,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"4","issue":"1","first_page":"36","last_page":"36"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9815999865531921,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9815999865531921,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.004900000058114529,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.0015999999595806003,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/vocabulary","display_name":"Vocabulary","score":0.67109215259552},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6349740028381348},{"id":"https://openalex.org/keywords/strain","display_name":"Strain (injury)","score":0.6302125453948975},{"id":"https://openalex.org/keywords/controlled-vocabulary","display_name":"Controlled vocabulary","score":0.5511267185211182},{"id":"https://openalex.org/keywords/nomenclature","display_name":"Nomenclature","score":0.5272188186645508},{"id":"https://openalex.org/keywords/congenic","display_name":"Congenic","score":0.4946906268596649},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4759533107280731},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.42633792757987976},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.40619519352912903},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3846419155597687},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.356533944606781},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.34094128012657166},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2713586091995239},{"id":"https://openalex.org/keywords/taxonomy","display_name":"Taxonomy (biology)","score":0.17248821258544922},{"id":"https://openalex.org/keywords/linguistics","display_name":"Linguistics","score":0.09382793307304382}],"concepts":[{"id":"https://openalex.org/C2777601683","wikidata":"https://www.wikidata.org/wiki/Q6499736","display_name":"Vocabulary","level":2,"score":0.67109215259552},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6349740028381348},{"id":"https://openalex.org/C2778022156","wikidata":"https://www.wikidata.org/wiki/Q576145","display_name":"Strain (injury)","level":2,"score":0.6302125453948975},{"id":"https://openalex.org/C110615152","wikidata":"https://www.wikidata.org/wiki/Q1469824","display_name":"Controlled vocabulary","level":2,"score":0.5511267185211182},{"id":"https://openalex.org/C514705636","wikidata":"https://www.wikidata.org/wiki/Q863247","display_name":"Nomenclature","level":3,"score":0.5272188186645508},{"id":"https://openalex.org/C84951073","wikidata":"https://www.wikidata.org/wiki/Q2379153","display_name":"Congenic","level":3,"score":0.4946906268596649},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4759533107280731},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.42633792757987976},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.40619519352912903},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3846419155597687},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.356533944606781},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.34094128012657166},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2713586091995239},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.17248821258544922},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.09382793307304382},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0}],"mesh":[],"locations_count":3,"locations":[{"id":"doi:10.1186/2041-1480-4-36","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-36","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-36","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:24267899","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24267899","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:europepmc.org:3145715","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4177145","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1186/2041-1480-4-36","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-36","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-36","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G4882042709","display_name":null,"funder_award_id":"R01 HL064541","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G5233786491","display_name":null,"funder_award_id":"HL64541","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G6351355492","display_name":null,"funder_award_id":"HL094271","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G8046924394","display_name":null,"funder_award_id":"HL64541","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"}],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2136067605.pdf","grobid_xml":"https://content.openalex.org/works/W2136067605.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W1481087540","https://openalex.org/W1521791862","https://openalex.org/W1547631667","https://openalex.org/W1551240089","https://openalex.org/W1868067250","https://openalex.org/W1964112948","https://openalex.org/W1972725067","https://openalex.org/W1996599952","https://openalex.org/W2024057264","https://openalex.org/W2048829416","https://openalex.org/W2049302531","https://openalex.org/W2059551510","https://openalex.org/W2063668515","https://openalex.org/W2081474094","https://openalex.org/W2096704019","https://openalex.org/W2098693458","https://openalex.org/W2104990432","https://openalex.org/W2113142309","https://openalex.org/W2113714756","https://openalex.org/W2121442708","https://openalex.org/W2122050289","https://openalex.org/W2122174694","https://openalex.org/W2126434293","https://openalex.org/W2136491105","https://openalex.org/W2145627818","https://openalex.org/W2148871416","https://openalex.org/W2153420420","https://openalex.org/W2158743996","https://openalex.org/W2401746618","https://openalex.org/W3141123571","https://openalex.org/W4291260029","https://openalex.org/W4320300830"],"related_works":["https://openalex.org/W1965215187","https://openalex.org/W1982601313","https://openalex.org/W3173734658","https://openalex.org/W2069288373","https://openalex.org/W260813174","https://openalex.org/W2030001176","https://openalex.org/W2415986580","https://openalex.org/W1989811317","https://openalex.org/W3202867831","https://openalex.org/W1597990569"],"abstract_inverted_index":{"BACKGROUND:":[0],"The":[1,25,114,185],"Rat":[2,42,56,107,115,209,310],"Genome":[3],"Database":[4],"(RGD)":[5],"(":[6,321,333,340],"http://rgd.mcw.edu/)":[7],"is":[8,200,258,324],"the":[9,16,20,49,60,78,106,120,150,190,203,218,231,265,308,317,327,336],"premier":[10],"site":[11,339],"for":[12,51,67,278,300,330],"comprehensive":[13],"data":[14,27,93,277],"on":[15,63,202],"different":[17],"strains":[18,76,135,154,176,237,281],"of":[19,53,81,128,163,177,217,230,233],"laboratory":[21],"rat":[22,39,129,225],"(Rattus":[23],"norvegicus).":[24],"strain":[26,219],"are":[28,155,213,227],"collected":[29],"from":[30,35],"various":[31],"publications,":[32],"direct":[33],"submissions":[34],"individual":[36],"researchers,":[37],"and":[38,46,55,71,87,125,144,159,193,199,253,298,302,323],"providers":[40],"worldwide.":[41],"strain,":[43],"substrain":[44],"designation":[45],"nomenclature":[47],"follow":[48],"Guidelines":[50],"Nomenclature":[52,66],"Mouse":[54],"Strains,":[57],"instituted":[58],"by":[59,136,157,161],"International":[61],"Committee":[62],"Standardized":[64],"Genetic":[65],"Mice.":[68],"While":[69],"symbols":[70],"names":[72],"aid":[73],"in":[74,103,181,261,303],"identifying":[75],"correctly,":[77],"flat":[79],"nature":[80],"this":[82,242],"information":[83],"prohibits":[84],"easy":[85,247],"search":[86],"retrieval,":[88],"as":[89,91,166,215,264,307],"well":[90],"other":[92],"mining":[94],"functions.":[95],"In":[96,147],"order":[97],"to":[98,173,249],"improve":[99],"these":[100],"functionalities,":[101],"particularly":[102,259],"ontology-based":[104],"tools,":[105],"Strain":[108,116,210,311],"Ontology":[109,117,195,211,312,319,332],"(RS)":[110,118],"was":[111,187],"developed.":[112],"RESULTS:":[113],"reflects":[119],"breeding":[121,240],"history,":[122],"parental":[123],"background,":[124],"genetic":[126],"manipulation":[127],"strains.":[130],"This":[131,170,291],"controlled":[132,292],"vocabulary":[133,243,293],"organizes":[134],"type:":[137],"inbred,":[138],"outbred,":[139],"chromosome":[140,151],"altered,":[141],"congenic,":[142],"mutant":[143,167],"so":[145],"on.":[146],"addition,":[148],"under":[149],"altered":[152,236],"category,":[153],"organized":[156,201],"chromosome,":[158],"further":[160],"type":[162],"manipulations,":[164],"such":[165,263,306],"or":[168,235,285,335],"congenic.":[169],"allows":[171,295],"users":[172,270],"easily":[174,273],"retrieve":[175,250,274],"interest":[178],"with":[179,282,287],"modifications":[180],"specific":[182],"genomic":[183,304],"regions.":[184,290],"ontology":[186],"developed":[188],"using":[189],"Open":[191],"Biological":[192],"Biomedical":[194,331],"(OBO)":[196],"file":[197],"format,":[198],"Directed":[204],"Acyclic":[205],"Graph":[206],"(DAG)":[207],"structure.":[208],"IDs":[212],"included":[214],"part":[216],"report":[220],"(RS:":[221],"######).":[222],"CONCLUSIONS:":[223],"As":[224],"researchers":[226],"often":[228],"unaware":[229],"number":[232],"substrains":[234,252],"within":[238],"a":[239],"line,":[241],"now":[244,272],"provides":[245],"an":[246],"way":[248],"all":[251],"accompanying":[254],"information.":[255],"Its":[256],"usefulness":[257],"evident":[260],"tools":[262,305],"PhenoMiner":[266],"at":[267],"RGD,":[268],"where":[269],"can":[271],"phenotype":[275],"measurement":[276],"related":[279],"strains,":[280],"similar":[283,288],"backgrounds":[284],"those":[286],"introgressed":[289],"also":[294],"better":[296],"retrieval":[297],"filtering":[299],"QTLs":[301],"GViewer.The":[309],"has":[313],"been":[314],"incorporated":[315],"into":[316],"RGD":[318,337],"Browser":[320],"http://rgd.mcw.edu/rgdweb/ontology/view.html?acc_id=RS:0000457#s)":[322],"available":[325],"through":[326],"National":[328],"Center":[329],"http://bioportal.bioontology.org/ontologies/1150)":[334],"ftp":[338],"ftp://rgd.mcw.edu/pub/ontology/rat_strain/).":[341]},"counts_by_year":[{"year":2023,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}
