{"id":"https://openalex.org/W2068309352","doi":"https://doi.org/10.1186/2041-1480-4-32","title":"The Drosophila anatomy ontology","display_name":"The Drosophila anatomy ontology","publication_year":2013,"publication_date":"2013-10-18","ids":{"openalex":"https://openalex.org/W2068309352","doi":"https://doi.org/10.1186/2041-1480-4-32","mag":"2068309352","pmid":"https://pubmed.ncbi.nlm.nih.gov/24139062"},"language":"en","primary_location":{"id":"doi:10.1186/2041-1480-4-32","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-32","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-32","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-32","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5076457920","display_name":"Marta Costa","orcid":"https://orcid.org/0000-0001-5948-3092"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":true,"raw_author_name":"Marta Costa","raw_affiliation_strings":["FlyBase, Department of Genetics, University of Cambridge, Downing Street, Cambridge, UK","FlyBase, Department of Genetics, University of Cambridge, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"FlyBase, Department of Genetics, University of Cambridge, Downing Street, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]},{"raw_affiliation_string":"FlyBase, Department of Genetics, University of Cambridge, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003771617","display_name":"Simon Reeve","orcid":null},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"Simon Reeve","raw_affiliation_strings":["FlyBase, Department of Genetics, University of Cambridge, Downing Street, Cambridge, UK","FlyBase, Department of Genetics, University of Cambridge, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"FlyBase, Department of Genetics, University of Cambridge, Downing Street, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]},{"raw_affiliation_string":"FlyBase, Department of Genetics, University of Cambridge, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021699465","display_name":"Gary Grumbling","orcid":null},"institutions":[{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gary Grumbling","raw_affiliation_strings":["FlyBase, Department of Biology, Indiana University, 1001 E 3rd Street, Bloomington, IN, 47405-7005, USA","FlyBase, Department of Biology, Indiana University, Bloomington, USA"],"affiliations":[{"raw_affiliation_string":"FlyBase, Department of Biology, Indiana University, 1001 E 3rd Street, Bloomington, IN, 47405-7005, USA","institution_ids":["https://openalex.org/I4210119109"]},{"raw_affiliation_string":"FlyBase, Department of Biology, Indiana University, Bloomington, USA","institution_ids":["https://openalex.org/I4210119109"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5053103903","display_name":"David Osumi-Sutherland","orcid":"https://orcid.org/0000-0002-7073-9172"},"institutions":[{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["GB"],"is_corresponding":false,"raw_author_name":"David Osumi-Sutherland","raw_affiliation_strings":["FlyBase, Department of Genetics, University of Cambridge, Downing Street, Cambridge, UK. djs93@gen.cam.ac.uk","FlyBase, Department of Genetics, University of Cambridge, Downing Street, Cambridge, UK"],"affiliations":[{"raw_affiliation_string":"FlyBase, Department of Genetics, University of Cambridge, Downing Street, Cambridge, UK. djs93@gen.cam.ac.uk","institution_ids":[]},{"raw_affiliation_string":"FlyBase, Department of Genetics, University of Cambridge, Downing Street, Cambridge, UK","institution_ids":["https://openalex.org/I241749"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5076457920"],"corresponding_institution_ids":["https://openalex.org/I241749"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":3.7431,"has_fulltext":true,"cited_by_count":78,"citation_normalized_percentile":{"value":0.93902916,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"4","issue":"1","first_page":"32","last_page":"32"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9825999736785889,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9571999907493591,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.8167253732681274},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.8039206266403198},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.6594548225402832},{"id":"https://openalex.org/keywords/consistency","display_name":"Consistency (knowledge bases)","score":0.6019976139068604},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.5428805351257324},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.47767433524131775},{"id":"https://openalex.org/keywords/quality","display_name":"Quality (philosophy)","score":0.43993979692459106},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.34963661432266235},{"id":"https://openalex.org/keywords/natural-language-processing","display_name":"Natural language processing","score":0.32105907797813416},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.14713594317436218}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.8167253732681274},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.8039206266403198},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.6594548225402832},{"id":"https://openalex.org/C2776436953","wikidata":"https://www.wikidata.org/wiki/Q5163215","display_name":"Consistency (knowledge bases)","level":2,"score":0.6019976139068604},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.5428805351257324},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.47767433524131775},{"id":"https://openalex.org/C2779530757","wikidata":"https://www.wikidata.org/wiki/Q1207505","display_name":"Quality (philosophy)","level":2,"score":0.43993979692459106},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.34963661432266235},{"id":"https://openalex.org/C204321447","wikidata":"https://www.wikidata.org/wiki/Q30642","display_name":"Natural language processing","level":1,"score":0.32105907797813416},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.14713594317436218},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[],"locations_count":6,"locations":[{"id":"doi:10.1186/2041-1480-4-32","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-32","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-32","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:24139062","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24139062","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:europepmc.org:2993716","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC4015547","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:4015547","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/4015547","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/289534","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/289534","pdf_url":null,"source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"doi:10.17863/cam.36784","is_oa":true,"landing_page_url":"https://doi.org/10.17863/cam.36784","pdf_url":null,"source":{"id":"https://openalex.org/S7407050737","display_name":"Apollo","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"article-journal"}],"best_oa_location":{"id":"doi:10.1186/2041-1480-4-32","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-32","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-32","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1257452502","display_name":null,"funder_award_id":"BB/G02233X/1","funder_id":"https://openalex.org/F4320334629","funder_display_name":"Biotechnology and Biological Sciences Research Council"}],"funders":[{"id":"https://openalex.org/F4320334629","display_name":"Biotechnology and Biological Sciences Research Council","ror":"https://ror.org/00cwqg982"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2068309352.pdf","grobid_xml":"https://content.openalex.org/works/W2068309352.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W63642558","https://openalex.org/W1984689602","https://openalex.org/W2021841129","https://openalex.org/W2034514363","https://openalex.org/W2044257395","https://openalex.org/W2061157482","https://openalex.org/W2084104913","https://openalex.org/W2089857530","https://openalex.org/W2090663694","https://openalex.org/W2097395913","https://openalex.org/W2111299816","https://openalex.org/W2112015698","https://openalex.org/W2116034137","https://openalex.org/W2116807975","https://openalex.org/W2120428260","https://openalex.org/W2134009291","https://openalex.org/W2137428218","https://openalex.org/W2137600012","https://openalex.org/W2150233912","https://openalex.org/W2162385209","https://openalex.org/W2163109444","https://openalex.org/W2169331639","https://openalex.org/W2398931073"],"related_works":["https://openalex.org/W1892467659","https://openalex.org/W2362192218","https://openalex.org/W1529400504","https://openalex.org/W2381477132","https://openalex.org/W2335343325","https://openalex.org/W1867395701","https://openalex.org/W2393185060","https://openalex.org/W2389552174","https://openalex.org/W102127224","https://openalex.org/W2803268045"],"abstract_inverted_index":{"As":[0],"a":[1,11,23,42,59],"result":[2],"of":[3,19,25,55,62,70,89,94,103,111,124],"the":[4,8,16,68,85,104,115],"work":[5],"described":[6],"here,":[7],"DAO":[9,116],"provides":[10],"high-quality,":[12],"queryable":[13],"reference":[14,46],"for":[15],"wild-type":[17],"anatomy":[18,126],"Drosophila":[20],"melanogaster":[21],"and":[22,44,47,67,87,97,107],"set":[24],"terms":[26],"to":[27,31,64,73,84,119,122],"annotate":[28],"data":[29],"related":[30],"that":[32],"anatomy.":[33],"Extensive,":[34],"well":[35],"referenced":[36],"textual":[37],"definitions":[38,99],"make":[39,100],"it":[40],"both":[41,95],"reliable":[43],"useful":[45,121],"ensure":[48],"accurate":[49],"use":[50,54,69,93],"in":[51,81,114],"annotation.":[52],"Wide":[53],"formal":[56,96],"axioms":[57],"allows":[58],"large":[60],"proportion":[61],"classification":[63],"be":[65,120],"automated":[66],"consistency":[71],"checking":[72],"eliminate":[74],"errors.":[75],"This":[76],"increased":[77],"formalisation":[78,112],"has":[79],"resulted":[80],"significant":[82],"improvements":[83],"completeness":[86],"accuracy":[88],"classification.":[90],"The":[91,109],"broad":[92],"informal":[98],"further":[101],"development":[102],"ontology":[105],"sustainable":[106],"scalable.":[108],"patterns":[110],"used":[113],"are":[117],"likely":[118],"developers":[123],"other":[125],"ontologies.":[127]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":6},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":8},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":7},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":6},{"year":2016,"cited_by_count":10},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":9},{"year":2013,"cited_by_count":1}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
