{"id":"https://openalex.org/W2137005667","doi":"https://doi.org/10.1186/2041-1480-4-16","title":"IDOMAL: the malaria ontology revisited","display_name":"IDOMAL: the malaria ontology revisited","publication_year":2013,"publication_date":"2013-09-13","ids":{"openalex":"https://openalex.org/W2137005667","doi":"https://doi.org/10.1186/2041-1480-4-16","mag":"2137005667","pmid":"https://pubmed.ncbi.nlm.nih.gov/24034841"},"language":"en","primary_location":{"id":"doi:10.1186/2041-1480-4-16","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-16","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-16","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-16","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5072160135","display_name":"Pantelis Topalis","orcid":"https://orcid.org/0000-0002-1635-4810"},"institutions":[{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["GR"],"is_corresponding":true,"raw_author_name":"Pantelis Topalis","raw_affiliation_strings":["Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas and Department of Biology, University of Crete, Heraklion, Crete, Greece. louis@imbb.forth.gr","Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Greece"],"affiliations":[{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas and Department of Biology, University of Crete, Heraklion, Crete, Greece. louis@imbb.forth.gr","institution_ids":[]},{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Greece","institution_ids":["https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020484099","display_name":"Elvira Mitraka","orcid":"https://orcid.org/0000-0003-0719-3485"},"institutions":[{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Elvira Mitraka","raw_affiliation_strings":["Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas and Department of Biology, University of Crete, Heraklion, Crete, Greece","Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology\u2010Hellas and Department of Biology, University of Crete Heraklion Greece"],"affiliations":[{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas and Department of Biology, University of Crete, Heraklion, Crete, Greece","institution_ids":["https://openalex.org/I8901234","https://openalex.org/I142617266"]},{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology\u2010Hellas and Department of Biology, University of Crete Heraklion Greece","institution_ids":["https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080395385","display_name":"Vicky Dritsou","orcid":"https://orcid.org/0000-0001-8073-0035"},"institutions":[{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Vicky Dritsou","raw_affiliation_strings":["Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Crete, Greece","Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Greece"],"affiliations":[{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Crete, Greece","institution_ids":["https://openalex.org/I8901234"]},{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Greece","institution_ids":["https://openalex.org/I8901234"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064865392","display_name":"Emmanuel Dialynas","orcid":null},"institutions":[{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["GR"],"is_corresponding":false,"raw_author_name":"Emmanuel Dialynas","raw_affiliation_strings":["Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Crete, Greece","Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Greece"],"affiliations":[{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Crete, Greece","institution_ids":["https://openalex.org/I8901234"]},{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas, Heraklion, Greece","institution_ids":["https://openalex.org/I8901234"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043815439","display_name":"Christos Louis","orcid":"https://orcid.org/0000-0003-2497-2210"},"institutions":[{"id":"https://openalex.org/I27483092","display_name":"University of Perugia","ror":"https://ror.org/00x27da85","country_code":"IT","type":"education","lineage":["https://openalex.org/I27483092"]},{"id":"https://openalex.org/I142617266","display_name":"University of Crete","ror":"https://ror.org/00dr28g20","country_code":"GR","type":"education","lineage":["https://openalex.org/I142617266"]},{"id":"https://openalex.org/I8901234","display_name":"Foundation for Research and Technology Hellas","ror":"https://ror.org/052rphn09","country_code":"GR","type":"facility","lineage":["https://openalex.org/I8901234"]}],"countries":["GR","IT"],"is_corresponding":false,"raw_author_name":"Christos Louis","raw_affiliation_strings":["Centre of Functional Genetics, Medical School, University of Perugia, Perugia, Italy","Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas and Department of Biology, University of Crete, Heraklion, Crete, Greece","Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas and Department of Biology, University of Crete, Heraklion, Greece"],"affiliations":[{"raw_affiliation_string":"Centre of Functional Genetics, Medical School, University of Perugia, Perugia, Italy","institution_ids":["https://openalex.org/I27483092"]},{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas and Department of Biology, University of Crete, Heraklion, Crete, Greece","institution_ids":["https://openalex.org/I8901234","https://openalex.org/I142617266"]},{"raw_affiliation_string":"Institute of Molecular Biology and Biotechnology, Foundation for Research and Technology-Hellas and Department of Biology, University of Crete, Heraklion, Greece","institution_ids":["https://openalex.org/I8901234"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5072160135"],"corresponding_institution_ids":["https://openalex.org/I8901234"],"apc_list":{"value":1190,"currency":"GBP","value_usd":1459},"apc_paid":{"value":1190,"currency":"GBP","value_usd":1459},"fwci":0.5858,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.69008977,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"4","issue":"1","first_page":"16","last_page":"16"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11642","display_name":"Genomics and Rare Diseases","score":0.9611999988555908,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10215","display_name":"Semantic Web and Ontologies","score":0.9599000215530396,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.7469717264175415},{"id":"https://openalex.org/keywords/ontology","display_name":"Ontology","score":0.7390303015708923},{"id":"https://openalex.org/keywords/malaria","display_name":"Malaria","score":0.6304925084114075},{"id":"https://openalex.org/keywords/open-biomedical-ontologies","display_name":"Open Biomedical Ontologies","score":0.5333445072174072},{"id":"https://openalex.org/keywords/domain","display_name":"Domain (mathematical analysis)","score":0.4110623896121979},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3909074068069458},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3072662651538849},{"id":"https://openalex.org/keywords/ontology-alignment","display_name":"Ontology alignment","score":0.2479790449142456},{"id":"https://openalex.org/keywords/process-ontology","display_name":"Process ontology","score":0.24683767557144165},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.11854112148284912},{"id":"https://openalex.org/keywords/semantic-web","display_name":"Semantic Web","score":0.11723116040229797}],"concepts":[{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.7469717264175415},{"id":"https://openalex.org/C25810664","wikidata":"https://www.wikidata.org/wiki/Q44325","display_name":"Ontology","level":2,"score":0.7390303015708923},{"id":"https://openalex.org/C2778048844","wikidata":"https://www.wikidata.org/wiki/Q12156","display_name":"Malaria","level":2,"score":0.6304925084114075},{"id":"https://openalex.org/C137982476","wikidata":"https://www.wikidata.org/wiki/Q7072326","display_name":"Open Biomedical Ontologies","level":5,"score":0.5333445072174072},{"id":"https://openalex.org/C36503486","wikidata":"https://www.wikidata.org/wiki/Q11235244","display_name":"Domain (mathematical analysis)","level":2,"score":0.4110623896121979},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3909074068069458},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3072662651538849},{"id":"https://openalex.org/C98893333","wikidata":"https://www.wikidata.org/wiki/Q4339878","display_name":"Ontology alignment","level":4,"score":0.2479790449142456},{"id":"https://openalex.org/C137003198","wikidata":"https://www.wikidata.org/wiki/Q7247296","display_name":"Process ontology","level":3,"score":0.24683767557144165},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.11854112148284912},{"id":"https://openalex.org/C2129575","wikidata":"https://www.wikidata.org/wiki/Q54837","display_name":"Semantic Web","level":2,"score":0.11723116040229797},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0},{"id":"https://openalex.org/C134306372","wikidata":"https://www.wikidata.org/wiki/Q7754","display_name":"Mathematical analysis","level":1,"score":0.0},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.0},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1186/2041-1480-4-16","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-16","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-16","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},{"id":"pmid:24034841","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/24034841","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of biomedical semantics","raw_type":null},{"id":"pmh:oai:europepmc.org:2835791","is_oa":true,"landing_page_url":"http://europepmc.org/articles/PMC3848731","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3848731","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3848731","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"J Biomed Semantics","raw_type":"Text"},{"id":"doi:10.25504/fairsharing.2q8c28","is_oa":true,"landing_page_url":"https://doi.org/10.25504/fairsharing.2q8c28","pdf_url":null,"source":{"id":"https://openalex.org/S7407053452","display_name":"FAIRsharing.org","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"}],"best_oa_location":{"id":"doi:10.1186/2041-1480-4-16","is_oa":true,"landing_page_url":"https://doi.org/10.1186/2041-1480-4-16","pdf_url":"https://jbiomedsem.biomedcentral.com/counter/pdf/10.1186/2041-1480-4-16","source":{"id":"https://openalex.org/S172276550","display_name":"Journal of Biomedical Semantics","issn_l":"2041-1480","issn":["2041-1480"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310320256","host_organization_name":"BioMed Central","host_organization_lineage":["https://openalex.org/P4310320256","https://openalex.org/P4310319965"],"host_organization_lineage_names":["BioMed Central","Springer Nature"],"type":"journal"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Journal of Biomedical Semantics","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.6499999761581421,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2137005667.pdf","grobid_xml":"https://content.openalex.org/works/W2137005667.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W326072622","https://openalex.org/W1501546233","https://openalex.org/W1566952502","https://openalex.org/W1569423075","https://openalex.org/W1581870951","https://openalex.org/W1979218314","https://openalex.org/W1979248081","https://openalex.org/W2001751527","https://openalex.org/W2004558984","https://openalex.org/W2020718817","https://openalex.org/W2021059941","https://openalex.org/W2028043278","https://openalex.org/W2089295355","https://openalex.org/W2103017472","https://openalex.org/W2113647209","https://openalex.org/W2117936709","https://openalex.org/W2123152121","https://openalex.org/W2129680162","https://openalex.org/W2135140530","https://openalex.org/W2137005667","https://openalex.org/W2138425832","https://openalex.org/W2142675451","https://openalex.org/W2142970879","https://openalex.org/W2153569313","https://openalex.org/W2160307042","https://openalex.org/W2311672126","https://openalex.org/W2395781445","https://openalex.org/W2402488703","https://openalex.org/W2479523499","https://openalex.org/W2488392005","https://openalex.org/W2788073857","https://openalex.org/W3143019134"],"related_works":["https://openalex.org/W2127299687","https://openalex.org/W1506177826","https://openalex.org/W2532736362","https://openalex.org/W2726617685","https://openalex.org/W1562796463","https://openalex.org/W3135477004","https://openalex.org/W1530162452","https://openalex.org/W2008629522","https://openalex.org/W2399880385","https://openalex.org/W2370212190"],"abstract_inverted_index":null,"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1}],"updated_date":"2026-03-02T08:37:19.008085","created_date":"2016-06-24T00:00:00"}
